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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:82937..84771- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002970-T1 ID=KJC3_002970-T1|Name=KJC3_002970-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1835bp|location=Sequence derived from alignment at ch3:82937..84771- (Aspergillus niger KJC3)
ATGGACAGCGCTTCAACTACACGTAGTTGCCGGCGTTGTAGCCTGAAAAA
GATACGATGTGACAAATCCCAGCCTTGCGCGAGTTGCATCAAGTCGGCCT
CGGAGTGCGTGTTCCCAGGCCCGGCCGAGCCCCACGACGAAAGAAACGGC
CCTTGAAGGCTCAACTTGTGTCGCGGCTGAAAAGCCTGGAGAAGGAGGTG
CAGGTTTTGACCCACAAGCTGGACGCTGTGAATCACAGGTCGAAACATCA
TTCCCCGCCGACAGAGAATAGACGCGCTGTAGAAGGCGAGCACGGGAAAT
TGTTAGTGGACAGAGGATCCATCCACTATATCAACCACGAGGTTCTTGTT
AATCTAGCAACCCAGATTGGTAGGCTCTGCAAGCATGGCACTTACGATAC
TGACACATGGCTCCTTGGCGAGCTGTAACAGACGAACGAAGATAGCGAAC
ACCTTAAGCATCACCTTGAGAACGGGGAGGATGAATCTGCGGTGCAAGAA
GTGGCATCAATCGGCAGGGAGTGTGAATTGGCGACCGGGAATGAATTTGT
GTTCCAGTATTCGTCGATGGCAGTTTCACTGTCCGACTTCTACCCCAGCA
GCGCCCTTGACCGTATCTTATGGAACTTATTCGAAGAGAATGTAGCCCCG
CTGGCTATGATCTTTCATAAACCGTGGCTTGCTAGCATCTTGAACAGTGC
AGGTGCAACGGCTATCGCGGATTACAAGGCTTTCGAGGCTGTGAGGTTTG
CCGTCTACTTTGCTGCCACTACCAGCATGAGCCCAGAGCAATGTACAGAA
ACATTCAGCCAGTGCCAGCCATCCCTGCAGCGATACTACCACTTTGCCAC
ACAGCAAGCATCGGCACGTGCCAATTTCCTCCAGTCGCAGAGCCTAACTG
TGCTTCAGGCAACAACCCTCTTCTTGACTTGTTTGCGTGGGGCAGATGAT
GCCGCCTTCGTCCGGGCTATGACAGCGGCTGTACATCGCATCGCACAGGG
ACTCGGGTTACATCGCGACGGTACCTACCTTGGGCTGAGCCCTTTCGAGA
CCGAGGTACGGCGCCGGCTGTGGTGGGCCATATACTCGTTAGACTGCCAG
TCTTCCGAGTTTCGTGCCATCGGTACGCAAATCAGAGAGGGCACCTACGA
CACCAAGTTACCCCTGAATATCCACGACTCGGATATATCGCCAGAGTCAA
GTTCGTTTCCTGGTGAAAGATCTTGTTTCACTGATATGACATTTGGTATG
ATACGGTGTGAAATGACGGTGCTTCATCGAAAGCTTCATTCAGATCTGCG
TTGTAGCAGCAGCAATTACGATGAAGGCGGCTCACTGAACGCGGTGAAAA
GGCTCCATGGGTTGAAAGAGATACACAATCGATTGCAGAGGCAGTACCTG
GGGCTCTGTGACGTCTCAATCCCATTGCAGTGGGTGACAACCACCGTCAT
CCGCCTGACTCTTGCTCGATCATGGTTGATTGCCCACCTCCCTGAAGGCA
TGTCCGCGGCAGAGCAGGTGTCGTTGATGGCACGCTCAGACGTGGAAGAC
CTCAAGTGGGGAAAGCTCTTCGTGATAGCCATTGAAATATTGGAGTTTGC
GTATTTGCTCGAGACCGACCCTCGCACCAAGAAGTGGTCACGGCTCTTCC
AGGGATACCCGCAATGGCATGCTGCCATCTTTGTCCTTAAGCAGATTGTC
ACTGGACCACAGACAATGCTGACTGACCGGGCCTGGGCTGTAGCAGTCAA
AGTCGTCACACGTTGGAGAAACACCGACTTTCGAAAGGACGGGGTGACCT
CGATCTTAGTGTCCCGTCTTATGGCGCAAGCTTGA back to topCoding sequence (CDS) from alignment at ch3:82937..84771- >KJC3_002970-T1 ID=KJC3_002970-T1|Name=KJC3_002970-T1|organism=Aspergillus niger KJC3|type=CDS|length=5085bp|location=Sequence derived from alignment at ch3:82937..84771- (Aspergillus niger KJC3)
ACGAACGAAGATAGCGAACACCTTAAGCATCACCTTGAGAACGGGGAGGA
TGAATCTGCGGTGCAAGAAGTGGCATCAATCGGCAGGGAGTGTGAATTGG
CGACCGGGAATGAATTTGTGTTCCAGTATTCGTCGATGGCAGTTTCACTG
TCCGACTTCTACCCCAGCAGCGCCCTTGACCGTATCTTATGGAACTTATT
CGAAGAGAATGTAGCCCCGCTGGCTATGATCTTTCATAAACCGTGGCTTG
CTAGCATCTTGAACAGTGCAGGTGCAACGGCTATCGCGGATTACAAGGCT
TTCGAGGCTGTGAGGTTTGCCGTCTACTTTGCTGCCACTACCAGCATGAG
CCCAGAGCAATGTACAGAAACATTCAGCCAGTGCCAGCCATCCCTGCAGC
GATACTACCACTTTGCCACACAGCAAGCATCGGCACGTGCCAATTTCCTC
CAGTCGCAGAGCCTAACTGTGCTTCAGGCAACAACCCTCTTCTTGACTTG
TTTGCGTGGGGCAGATGATGCCGCCTTCGTCCGGGCTATGACAGCGGCTG
TACATCGCATCGCACAGGGACTCGGGTTACATCGCGACGGTACCTACCTT
GGGCTGAGCCCTTTCGAGACCGAGGTACGGCGCCGGCTGTGGTGGGCCAT
ATACTCGTTAGACTGCCAGTCTTCCGAGTTTCGTGCCATCGGTACGCAAA
TCAGAGAGGGCACCTACGACACCAAGTTACCCCTGAATATCCACGACTCG
GATATATCGCCAGAGTCAAGTTCGTTTCCTGGTGAAAGATCTTGTTTCAC
TGATATGACATTTGGTATGATACGGTGTGAAATGACGGTGCTTCATCGAA
AGCTTCATTCAGATCTGCGTTGTAGCAGCAGCAATTACGATGAAGGCGGC
TCACTGAACGCGGTGAAAAGGCTCCATGGGTTGAAAGAGATACACAATCG
ATTGCAGAGGCAGTACCTGGGGCTCTGTGACGTCTCAATCCCATTGCAGT
GGGTGACAACCACCGTCATCCGCCTGACTCTTGCTCGATCATGGTTGATT
GCCCACCTCCCTGAAGGCATGTCCGCGGCAGAGCAGGTGTCGTTGATGGC
ACGCTCAGACGTGGAAGACCTCAAGTGGGGAAAGCTCTTCGTGATAGCCA
TTGAAATATTGGAGTTTGCGTATTTGCTCGAGACCGACCCTCGCACCAAG
AAGTGGTCACGGCTCTTCCAGGGATACCCGCAATGGCATGCTGCCATCTT
TGTCCTTAAGCAGATTGTCACTGGACCACAGACAATGCTGACTGACCGGG
CCTGGGCTGTAGCAGTCAAAGTCGTCACACGTTGGAGAAACACCGACTTT
CGAAAGGACGGGGTGACCTCGATCTTAGTGTCCCGTCTTATGGCGCAAGC
TTGACCTTGCGCGAGTTGCATCAAGTCGGCCTCGGAGTGCGTGTTCCCAG
GCCCGGCCGAGCCCCACGACGAAAGAAACGGCCCTTGAAGGCTCAACTTG
TGTCGCGGCTGAAAAGCCTGGAGAAGGAGGTGCAGGTTTTGACCCACAAG
CTGGACGCTGTGAATCACAGGTCGAAACATCATTCCCCGCCGACAGAGAA
TAGACGCGCTGTAGAAGGCGAGCACGGGAAATTGTTAGTGGACAGAGGAT
CCATCCACTATATCAACCACGAGATGGACAGCGCTTCAACTACACACGAA
CGAAGATAGCGAACACCTTAAGCATCACCTTGAGAACGGGGAGGATGAAT
CTGCGGTGCAAGAAGTGGCATCAATCGGCAGGGAGTGTGAATTGGCGACC
GGGAATGAATTTGTGTTCCAGTATTCGTCGATGGCAGTTTCACTGTCCGA
CTTCTACCCCAGCAGCGCCCTTGACCGTATCTTATGGAACTTATTCGAAG
AGAATGTAGCCCCGCTGGCTATGATCTTTCATAAACCGTGGCTTGCTAGC
ATCTTGAACAGTGCAGGTGCAACGGCTATCGCGGATTACAAGGCTTTCGA
GGCTGTGAGGTTTGCCGTCTACTTTGCTGCCACTACCAGCATGAGCCCAG
AGCAATGTACAGAAACATTCAGCCAGTGCCAGCCATCCCTGCAGCGATAC
TACCACTTTGCCACACAGCAAGCATCGGCACGTGCCAATTTCCTCCAGTC
GCAGAGCCTAACTGTGCTTCAGGCAACAACCCTCTTCTTGACTTGTTTGC
GTGGGGCAGATGATGCCGCCTTCGTCCGGGCTATGACAGCGGCTGTACAT
CGCATCGCACAGGGACTCGGGTTACATCGCGACGGTACCTACCTTGGGCT
GAGCCCTTTCGAGACCGAGGTACGGCGCCGGCTGTGGTGGGCCATATACT
CGTTAGACTGCCAGTCTTCCGAGTTTCGTGCCATCGGTACGCAAATCAGA
GAGGGCACCTACGACACCAAGTTACCCCTGAATATCCACGACTCGGATAT
ATCGCCAGAGTCAAGTTCGTTTCCTGGTGAAAGATCTTGTTTCACTGATA
TGACATTTGGTATGATACGGTGTGAAATGACGGTGCTTCATCGAAAGCTT
CATTCAGATCTGCGTTGTAGCAGCAGCAATTACGATGAAGGCGGCTCACT
GAACGCGGTGAAAAGGCTCCATGGGTTGAAAGAGATACACAATCGATTGC
AGAGGCAGTACCTGGGGCTCTGTGACGTCTCAATCCCATTGCAGTGGGTG
ACAACCACCGTCATCCGCCTGACTCTTGCTCGATCATGGTTGATTGCCCA
CCTCCCTGAAGGCATGTCCGCGGCAGAGCAGGTGTCGTTGATGGCACGCT
CAGACGTGGAAGACCTCAAGTGGGGAAAGCTCTTCGTGATAGCCATTGAA
ATATTGGAGTTTGCGTATTTGCTCGAGACCGACCCTCGCACCAAGAAGTG
GTCACGGCTCTTCCAGGGATACCCGCAATGGCATGCTGCCATCTTTGTCC
TTAAGCAGATTGTCACTGGACCACAGACAATGCTGACTGACCGGGCCTGG
GCTGTAGCAGTCAAAGTCGTCACACGTTGGAGAAACACCGACTTTCGAAA
GGACGGGGTGACCTCGATCTTAGTGTCCCGTCTTATGGCGCAAGCTTGAC
CTTGCGCGAGTTGCATCAAGTCGGCCTCGGAGTGCGTGTTCCCAGGCCCG
GCCGAGCCCCACGACGAAAGAAACGGCCCTTGAAGGCTCAACTTGTGTCG
CGGCTGAAAAGCCTGGAGAAGGAGGTGCAGGTTTTGACCCACAAGCTGGA
CGCTGTGAATCACAGGTCGAAACATCATTCCCCGCCGACAGAGAATAGAC
GCGCTGTAGAAGGCGAGCACGGGAAATTGTTAGTGGACAGAGGATCCATC
CACTATATCAACCACGAGATGGACAGCGCTTCAACTACACACGAACGAAG
ATAGCGAACACCTTAAGCATCACCTTGAGAACGGGGAGGATGAATCTGCG
GTGCAAGAAGTGGCATCAATCGGCAGGGAGTGTGAATTGGCGACCGGGAA
TGAATTTGTGTTCCAGTATTCGTCGATGGCAGTTTCACTGTCCGACTTCT
ACCCCAGCAGCGCCCTTGACCGTATCTTATGGAACTTATTCGAAGAGAAT
GTAGCCCCGCTGGCTATGATCTTTCATAAACCGTGGCTTGCTAGCATCTT
GAACAGTGCAGGTGCAACGGCTATCGCGGATTACAAGGCTTTCGAGGCTG
TGAGGTTTGCCGTCTACTTTGCTGCCACTACCAGCATGAGCCCAGAGCAA
TGTACAGAAACATTCAGCCAGTGCCAGCCATCCCTGCAGCGATACTACCA
CTTTGCCACACAGCAAGCATCGGCACGTGCCAATTTCCTCCAGTCGCAGA
GCCTAACTGTGCTTCAGGCAACAACCCTCTTCTTGACTTGTTTGCGTGGG
GCAGATGATGCCGCCTTCGTCCGGGCTATGACAGCGGCTGTACATCGCAT
CGCACAGGGACTCGGGTTACATCGCGACGGTACCTACCTTGGGCTGAGCC
CTTTCGAGACCGAGGTACGGCGCCGGCTGTGGTGGGCCATATACTCGTTA
GACTGCCAGTCTTCCGAGTTTCGTGCCATCGGTACGCAAATCAGAGAGGG
CACCTACGACACCAAGTTACCCCTGAATATCCACGACTCGGATATATCGC
CAGAGTCAAGTTCGTTTCCTGGTGAAAGATCTTGTTTCACTGATATGACA
TTTGGTATGATACGGTGTGAAATGACGGTGCTTCATCGAAAGCTTCATTC
AGATCTGCGTTGTAGCAGCAGCAATTACGATGAAGGCGGCTCACTGAACG
CGGTGAAAAGGCTCCATGGGTTGAAAGAGATACACAATCGATTGCAGAGG
CAGTACCTGGGGCTCTGTGACGTCTCAATCCCATTGCAGTGGGTGACAAC
CACCGTCATCCGCCTGACTCTTGCTCGATCATGGTTGATTGCCCACCTCC
CTGAAGGCATGTCCGCGGCAGAGCAGGTGTCGTTGATGGCACGCTCAGAC
GTGGAAGACCTCAAGTGGGGAAAGCTCTTCGTGATAGCCATTGAAATATT
GGAGTTTGCGTATTTGCTCGAGACCGACCCTCGCACCAAGAAGTGGTCAC
GGCTCTTCCAGGGATACCCGCAATGGCATGCTGCCATCTTTGTCCTTAAG
CAGATTGTCACTGGACCACAGACAATGCTGACTGACCGGGCCTGGGCTGT
AGCAGTCAAAGTCGTCACACGTTGGAGAAACACCGACTTTCGAAAGGACG
GGGTGACCTCGATCTTAGTGTCCCGTCTTATGGCGCAAGCTTGACCTTGC
GCGAGTTGCATCAAGTCGGCCTCGGAGTGCGTGTTCCCAGGCCCGGCCGA
GCCCCACGACGAAAGAAACGGCCCTTGAAGGCTCAACTTGTGTCGCGGCT
GAAAAGCCTGGAGAAGGAGGTGCAGGTTTTGACCCACAAGCTGGACGCTG
TGAATCACAGGTCGAAACATCATTCCCCGCCGACAGAGAATAGACGCGCT
GTAGAAGGCGAGCACGGGAAATTGTTAGTGGACAGAGGATCCATCCACTA
TATCAACCACGAGATGGACAGCGCTTCAACTACAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.2 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:82937..84771 - |
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