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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:86524..88274+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002972-T1 ID=KJC3_002972-T1|Name=KJC3_002972-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1751bp|location=Sequence derived from alignment at ch3:86524..88274+ (Aspergillus niger KJC3)
TCTTGGAATCTTGTAGAAGTATATTGGCTGCCTCGCATTGCTTCACATCG
TCTCCATTTGGTTTTCGATTTACTATCCACTTTCGGAGTTGCCTCGAATG
TGACAAGAGCATTCTTGCCAAGTAGGCCAAAACAATATATTGCAGGCTAC
CAAGCAGATGGGGTGACTCAAGTGTCTCAACATGATGGACCTGGAAGAGT
TCCAAGTGGGGCGGTAGCGGATACGATAGGTTCCAAGTCCAGGCTGCAGC
TGGAGGCCTAAATAACACCCAGTATTTTAAGCGAATTTTCCCTTCCAGGG
TCTCCTTGCCTCTTTCCAGTCATTGTCACCTCTTTTCATTTCGCAGTAAT
TCAGTATGTCAACAAAGGCTCCGAACAGCACCAACCCGTCGTCCCTCGAC
GCGGACGAAACCATGCGCCAGGCCGTTGATCGGTTCCGCACGCGCATGGC
GGCCGCCAACAAGAAGTTCGTCCAGGACCGCATCGATGAGATTGACGCCC
GCGGACTCGCAACTGAGAAGGAGAGAATCCGCAAGTTGCAGGATTGGCGC
CATTTCGACGACTTAGACCGAGACGAACCGGACGGTCACACCAGCCCCGA
CGCCCGCCGCATAAGCGACCAGTTCCGGCAGACTCGGGAGTTGGCAGCAG
TGCCGGCGCTGCTGGCCAAGGAGACACGCCCCCTGTTCGCCATGGACGGG
GTCCACCCGCCGCGGCTCCGCACGCCAGAAGCCCGCGAAATGTTTCTCGA
TACCCTGCAGGAAGTATTCCACCGGCAGGCGGAGGAGTGGGCGGCCGCCG
AGGACGAGGATTTAGATTTGACCTCGGAGCCGATCCCACGCTGTGAGGAG
CTGGGCCGGCTTTTAACATATGCCCACGAGGTGGAAGACCCGGACTTTCG
CCACTCGGGCGTCGCCCCCTTCGAGGCAGCGTTATTAGTGCAAAGCCGGT
ATGGAAGCTTCCCCTGTCTGGACACGCAGGAGCAGCGGGACCAGTACCAT
GCGCGTGTACGCCAGGAATGTGCGCGGCTGCGGGAGTGGCTGGAGGGGGA
GAACTCGGACTTGATCAATAAGGCCAAGATTGTGGCCGGTCCGGATGAAG
ATCTGGAGGTCCGAGCGGGCGTGGTCACGGGCAGCGGCTACGTGGGGGAG
TATCCGAAGTGGTACAGCGCGTACCTGTACTGCCGGAAGCGTCTAGAGGA
GGATATGGATGGGATCGAATTCCGCGATGAAGGTATCCTGGACGCCCCCA
ATATCCAGGAGTGGGGGTGGCGCGTGGTGTTTATGGAGGCCGAGGCGTCT
CCCGTCTTCGAGCCGCAGATACTCTACGGACGGAAGCCGCGCTTTGACTC
GATCCCAGAGTTTTTGGACTGGTACGCGAGCTGGGCGGACAACTTGGATG
CCCGCGGGGTGCTCAGTCTCCGCCGGCATCTGAGAAATTGTGATACTGAT
TGCGAGTCCGATTGTGAGGAGCACTGCTTATAGGAATCTGGTCCCCTTCT
GTGAGGGAGGGAATAACACGTTGAGAAAAGAACAATTGGCCCATCGCTCG
GTGCTGCTTGTATGTTTTCTCGGAATCTGACTTCGGACAAAACTCATATT
CAATGCAAAACATCGTATGCAAGCAGAGAACTTCGAATGAAAGAAGACAA
ATGTGAGCAAGCTGGGGTGCAATTGAGAGAGCAAGCCTCGGAGAAGTGAA
TCCTCGCGATTCTCTTTGATATATTCCGAAAATATGTATAGTAGTTGAAA
G back to topCoding sequence (CDS) from alignment at ch3:86524..88274+ >KJC3_002972-T1 ID=KJC3_002972-T1|Name=KJC3_002972-T1|organism=Aspergillus niger KJC3|type=CDS|length=1128bp|location=Sequence derived from alignment at ch3:86524..88274+ (Aspergillus niger KJC3)
ATGTCAACAAAGGCTCCGAACAGCACCAACCCGTCGTCCCTCGACGCGGA
CGAAACCATGCGCCAGGCCGTTGATCGGTTCCGCACGCGCATGGCGGCCG
CCAACAAGAAGTTCGTCCAGGACCGCATCGATGAGATTGACGCCCGCGGA
CTCGCAACTGAGAAGGAGAGAATCCGCAAGTTGCAGGATTGGCGCCATTT
CGACGACTTAGACCGAGACGAACCGGACGGTCACACCAGCCCCGACGCCC
GCCGCATAAGCGACCAGTTCCGGCAGACTCGGGAGTTGGCAGCAGTGCCG
GCGCTGCTGGCCAAGGAGACACGCCCCCTGTTCGCCATGGACGGGGTCCA
CCCGCCGCGGCTCCGCACGCCAGAAGCCCGCGAAATGTTTCTCGATACCC
TGCAGGAAGTATTCCACCGGCAGGCGGAGGAGTGGGCGGCCGCCGAGGAC
GAGGATTTAGATTTGACCTCGGAGCCGATCCCACGCTGTGAGGAGCTGGG
CCGGCTTTTAACATATGCCCACGAGGTGGAAGACCCGGACTTTCGCCACT
CGGGCGTCGCCCCCTTCGAGGCAGCGTTATTAGTGCAAAGCCGGTATGGA
AGCTTCCCCTGTCTGGACACGCAGGAGCAGCGGGACCAGTACCATGCGCG
TGTACGCCAGGAATGTGCGCGGCTGCGGGAGTGGCTGGAGGGGGAGAACT
CGGACTTGATCAATAAGGCCAAGATTGTGGCCGGTCCGGATGAAGATCTG
GAGGTCCGAGCGGGCGTGGTCACGGGCAGCGGCTACGTGGGGGAGTATCC
GAAGTGGTACAGCGCGTACCTGTACTGCCGGAAGCGTCTAGAGGAGGATA
TGGATGGGATCGAATTCCGCGATGAAGGTATCCTGGACGCCCCCAATATC
CAGGAGTGGGGGTGGCGCGTGGTGTTTATGGAGGCCGAGGCGTCTCCCGT
CTTCGAGCCGCAGATACTCTACGGACGGAAGCCGCGCTTTGACTCGATCC
CAGAGTTTTTGGACTGGTACGCGAGCTGGGCGGACAACTTGGATGCCCGC
GGGGTGCTCAGTCTCCGCCGGCATCTGAGAAATTGTGATACTGATTGCGA
GTCCGATTGTGAGGAGCACTGCTTATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002972-T1.utr5p1 | KJC3_002972-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002972-T1.utr3p1 | KJC3_002972-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:86524..88274 + |
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