You are here

Home

KJC3_002976-T1, KJC3_002976-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002976-T1
Unique NameKJC3_002976-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:93100..94171+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002976-T1 ID=KJC3_002976-T1|Name=KJC3_002976-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1072bp|location=Sequence derived from alignment at ch3:93100..94171+ (Aspergillus niger KJC3)
ATGAAGGTCGGAATTGCAGGAATCACGGGCAAATTTGCCCGCCGGCTTCT
CACCCACCTCCTTGAAGCTGGTGACGACTCCCTGACTATCAGAGGGTACT
GCCGCAGCCCTTCGAAGCTCCCAGACTTCGTGAAAACGTCTCCCAAGCTT
GAGATAATTGAGGGCGCTGCGTTTGACCAAGACGCAATTGCCACCTTCGT
CCAAGGCTGCGACGTTGTTGTCTGCTGCTACCTCGGCGATGACAAGCTCA
TGGTGGACGGCCAGAAGCTCCTCATCGACGCTTGTGAATCGGCCAATGTT
CGGCGCTACGTGGCCAGTGACTGGGCGCTGGATTACACCAAACTGAAGTT
GGGCGAGTTGTTCCCCAAGGATCCCATGATCCATGTCAAGAACTACCTCG
ATACGGAGAAGAAGAAGATTTCCGGAGTGCACATTCTCATTGGTGGCTTC
ATGGAGCCCATCTTCAGTCCCTTCTTCAACATTGTGGATACGCAGACCAA
TACTTTCCGGTACTGGGGTGATGGCAATGAGATCATGGAGGGAACGACCT
ACGATGATGCCGCCAAGTACACGGCAAAGGTGGTCTTGGATCCAGAGGCA
AAGGGTGTGCTGAAATGTAAGTCGGGCTTGATTCCAGCATGCCTCGTTTA
TATATAGTTCTAATGAGTTTATTTATTGGGTCAGTTGTTGGAGGCCGCGC
GACTATCCGGGAAATTGCCAAGTCGTATGAGAAGGTCTACGGTGCCCCGG
TGACACTGGAGAAACGCGGGTCTCTCGAAGACTTGTACAAGACCATGCAT
GACAAGCGAATGAAGAGCCCTCAGGATATCTACAGCTATATGTCTTTGTA
CGTCTACATCAAGAGTCCATCTTTCACCATATCGGTCATAAACTAATAAA
GCATTCCTTCCATAGGTTCTTCTACTACTACTGGATCAACGGACAGACTT
TTGTTGGGCCGGAGCTGGACAATGCCCGTTATCCGGATGTCAAGGCAGTC
GATTGGGAGGGCTTTATGAAGAGCTGGTCTCAGGAGCAGATTGGGGCATC
TTACTTTGCTTTGAATATGTAG
back to top

Coding sequence (CDS) from alignment at ch3:93100..94171+

>KJC3_002976-T1 ID=KJC3_002976-T1|Name=KJC3_002976-T1|organism=Aspergillus niger KJC3|type=CDS|length=2808bp|location=Sequence derived from alignment at ch3:93100..94171+ (Aspergillus niger KJC3)
ATGAAGGTCGGAATTGCAGGAATCACGGGCAAATTTGCCCGCCGGCTTCT
CACCCACCTCCTTGAAGCTGGTGACGACTCCCTGACTATCAGAGGGTACT
GCCGCAGCCCTTCGAAGCTCCCAGACTTCGTGAAAACGTCTCCCAAGCTT
GAGATAATTGAGGGCGCTGCGTTTGACCAAGACGCAATTGCCACCTTCGT
CCAAGGCTGCGACGTTGTTGTCTGCTGCTACCTCGGCGATGACAAGCTCA
TGGTGGACGGCCAGAAGCTCCTCATCGACGCTTGTGAATCGGCCAATGTT
CGGCGCTACGTGGCCAGTGACTGGGCGCTGGATTACACCAAACTGAAGTT
GGGCGAGTTGTTCCCCAAGGATCCCATGATCCATGTCAAGAACTACCTCG
ATACGGAGAAGAAGAAGATTTCCGGAGTGCACATTCTCATTGGTGGCTTC
ATGGAGCCCATCTTCAGTCCCTTCTTCAACATTGTGGATACGCAGACCAA
TACTTTCCGGTACTGGGGTGATGGCAATGAGATCATGGAGGGAACGACCT
ACGATGATGCCGCCAAGTACACGGCAAAGGTGGTCTTGGATCCAGAGGCA
AAGGGTGTGCTGAAATTTGTTGGAGGCCGCGCGACTATCCGGGAAATTGC
CAAGTCGTATGAGAAGGTCTACGGTGCCCCGGTGACACTGGAGAAACGCG
GGTCTCTCGAAGACTTGTACAAGACCATGCATGACAAGCGAATGAAGAGC
CCTCAGGATATCTACAGCTATATGTCTTTGTTCTTCTACTACTACTGGAT
CAACGGACAGACTTTTGTTGGGCCGGAGCTGGACAATGCCCGTTATCCGG
ATGTCAAGGCAGTCGATTGGGAGGGCTTTATGAAGAGCTGGTCTCAGGAG
CAGATTGGGGCATCTTACTTTGCTTTGAATATGTAGATGAAGGTCGGAAT
TGCAGGAATCACGGGCAAATTTGCCCGCCGGCTTCTCACCCACCTCCTTG
AAGCTGGTGACGACTCCCTGACTATCAGAGGGTACTGCCGCAGCCCTTCG
AAGCTCCCAGACTTCGTGAAAACGTCTCCCAAGCTTGAGATAATTGAGGG
CGCTGCGTTTGACCAAGACGCAATTGCCACCTTCGTCCAAGGCTGCGACG
TTGTTGTCTGCTGCTACCTCGGCGATGACAAGCTCATGGTGGACGGCCAG
AAGCTCCTCATCGACGCTTGTGAATCGGCCAATGTTCGGCGCTACGTGGC
CAGTGACTGGGCGCTGGATTACACCAAACTGAAGTTGGGCGAGTTGTTCC
CCAAGGATCCCATGATCCATGTCAAGAACTACCTCGATACGGAGAAGAAG
AAGATTTCCGGAGTGCACATTCTCATTGGTGGCTTCATGGAGCCCATCTT
CAGTCCCTTCTTCAACATTGTGGATACGCAGACCAATACTTTCCGGTACT
GGGGTGATGGCAATGAGATCATGGAGGGAACGACCTACGATGATGCCGCC
AAGTACACGGCAAAGGTGGTCTTGGATCCAGAGGCAAAGGGTGTGCTGAA
ATTTGTTGGAGGCCGCGCGACTATCCGGGAAATTGCCAAGTCGTATGAGA
AGGTCTACGGTGCCCCGGTGACACTGGAGAAACGCGGGTCTCTCGAAGAC
TTGTACAAGACCATGCATGACAAGCGAATGAAGAGCCCTCAGGATATCTA
CAGCTATATGTCTTTGTTCTTCTACTACTACTGGATCAACGGACAGACTT
TTGTTGGGCCGGAGCTGGACAATGCCCGTTATCCGGATGTCAAGGCAGTC
GATTGGGAGGGCTTTATGAAGAGCTGGTCTCAGGAGCAGATTGGGGCATC
TTACTTTGCTTTGAATATGTAGATGAAGGTCGGAATTGCAGGAATCACGG
GCAAATTTGCCCGCCGGCTTCTCACCCACCTCCTTGAAGCTGGTGACGAC
TCCCTGACTATCAGAGGGTACTGCCGCAGCCCTTCGAAGCTCCCAGACTT
CGTGAAAACGTCTCCCAAGCTTGAGATAATTGAGGGCGCTGCGTTTGACC
AAGACGCAATTGCCACCTTCGTCCAAGGCTGCGACGTTGTTGTCTGCTGC
TACCTCGGCGATGACAAGCTCATGGTGGACGGCCAGAAGCTCCTCATCGA
CGCTTGTGAATCGGCCAATGTTCGGCGCTACGTGGCCAGTGACTGGGCGC
TGGATTACACCAAACTGAAGTTGGGCGAGTTGTTCCCCAAGGATCCCATG
ATCCATGTCAAGAACTACCTCGATACGGAGAAGAAGAAGATTTCCGGAGT
GCACATTCTCATTGGTGGCTTCATGGAGCCCATCTTCAGTCCCTTCTTCA
ACATTGTGGATACGCAGACCAATACTTTCCGGTACTGGGGTGATGGCAAT
GAGATCATGGAGGGAACGACCTACGATGATGCCGCCAAGTACACGGCAAA
GGTGGTCTTGGATCCAGAGGCAAAGGGTGTGCTGAAATTTGTTGGAGGCC
GCGCGACTATCCGGGAAATTGCCAAGTCGTATGAGAAGGTCTACGGTGCC
CCGGTGACACTGGAGAAACGCGGGTCTCTCGAAGACTTGTACAAGACCAT
GCATGACAAGCGAATGAAGAGCCCTCAGGATATCTACAGCTATATGTCTT
TGTTCTTCTACTACTACTGGATCAACGGACAGACTTTTGTTGGGCCGGAG
CTGGACAATGCCCGTTATCCGGATGTCAAGGCAGTCGATTGGGAGGGCTT
TATGAAGAGCTGGTCTCAGGAGCAGATTGGGGCATCTTACTTTGCTTTGA
ATATGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002976KJC3_002976Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002976-T1.exon1KJC3_002976-T1.exon1Aspergillus niger KJC3exon
KJC3_002976-T1.exon2KJC3_002976-T1.exon2Aspergillus niger KJC3exon
KJC3_002976-T1.exon3KJC3_002976-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002976-T1.cdsKJC3_002976-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002976-T1KJC3_002976-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR016040
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:93100..94171 +
Powered by Drupal