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KJC3_002979-T1, KJC3_002979-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002979-T1
Unique NameKJC3_002979-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:102538..104726+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002979-T1 ID=KJC3_002979-T1|Name=KJC3_002979-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2189bp|location=Sequence derived from alignment at ch3:102538..104726+ (Aspergillus niger KJC3)
AAGCAATTCATTTCTCCTCGGTCAAATGGCGCGAGCTTTCACCTATTCTC
CTTTAGATCCGTCCTCTAAATGTATTAGGCTTCTCGAATTGCTGCCATCT
GCAGCGCATGAATCGGTTCGCTGCAGACTACATGTTGTCGACCAAACCTG
CCGTCCGTCTTACGTTGCTTTATCATACACCTGGGGTTCTCCGCACAGCA
GGCTATCAATTGAGTTGGACGATGCGGAGTTCCACGTGCAAGAAAATCTT
TGGAATTTTCTGGACACTATGAACTCTTGCCAGAGATGGCGGCTTTTCTG
GATTGACGCTATATGTATCGATCAGTCCTGTATTTCGGAGCGGAATCACC
AAGTCAACATGATGAGGGATATATATGCCGGAGCAACACTCACGGTGGTA
TGGTTAGGCCAAGCCTTTGATTTCTGTGACCTCGCCATTAGATATATCGC
AAATCCAGGTTTACCAATTAAAGAGACCACATCAGCCTTGGAGAAAGCGT
TGAAAAGTCTACTGGAGCAACCGTATTGGAGTCGCATATGGATCGTCCAA
GAGCTCATGCTCGCAAAAAACGTCATATTCTACTGCGGCAGAACCAGCTT
TACTTGGCATCAGTTGGCATCTCTTCGCCAGAAGATAAAAACCCATGTCG
CCCATCATGATTCATTGGGTATCTCGAAGTGTATAGGTTCGGTAATGGTC
GCGCAGAAAACGCTATGGGATAACCTTCCCAAAGATGACCCGCACTTACC
CCTCTCGGATTTGCTGATTACGTATGGAAGACATAAAAGTTCAGATGTAA
GGGATAGAGTGTATGCACTGCTTGGTCTTTCTTCGGAAAATTCAATCCAG
GCGGACTATAATCTATCAGTGGAACACATATATATCGAGGTACTGGAAGC
AATCTGCAAAGAGAGAAACCCCAGACACCAGCTCTCCACTATCGAACATA
CCTTACAGGAAATGTTGTGCTTGCAAGAGGGCCCCAGGAAACCCAGAAAC
CAGCTCTCCACCATCGAACATACGTTACGGGAAATGCTGGGCCTCAGGAG
ACCACGGACCCCAAGTGGCCATCCTACACCTGGCGATGCCTTTGCGATCA
GGGTCCTGGAACTACGGCGGCAGAAGCTTGGCAATACGCACCCCCACGTT
CTTGAAGGAATGGCCAGTCTCGCACAGCTATACAATGAGCAGGGCCAATC
AAAGTTAGCTGAGCAAACCGGAATTGAGGTACTGCAAATACGGAGAGAAA
TACTTGGTAATACACATCCTAGCGCTCTTCAAAGCATGGCAAACCTTGTG
TCAGTTTACCTCCGGCAAGGCAGGCTTGACAAGGCCGAGAAAATGGGGAA
CAAAGTATTGCAGCTGCAAAGAGAAATACTCAGTGAGAAACATCCTGATA
CTCTTCAAAGCATGATAAATCTTATGTTGATATACCACGAGCAAGGCAAG
ATCAAGGAGACTGAGAAAATTAGGAATGAAGTGATTCAATGCTTGGCAAA
TCTTGTATCAATATACCGCGAGCAAGGCAAGCTTAGGGAGGCTGAGGAAT
TGGGAGACAAAGTATTGCGGCTGCAAAGAGAAATATTCAGTGAGAAACAT
CCTGATACTCTCCAAAGCATGATAAATCTTATGTTGATATACCACGAGCA
AGGCAAGCTTAAGGAGACTGAGAAACTTGGAGATGAAGTTATTCAGTGCA
TGGCAAACCTTGTATCAATATACCGCGAGCAAGGCAAGCTTAGGGAGGCT
GAGGAATTGGGGGCCGAAGTGCTTCAAAGCATGACAAATCTTGTGAAAAT
ATGCTGTTGGCGAGACAGGCCTGGAGAGGCCGAGAAAGTGGTTGACAAAG
TGTTGCAATGCATGGCAAACATTATGTCAATATACCGTGAGCAAGGCAAG
CTTAAGGAGGCCGACGAGGTAGGATACAAAGTGTTTCAATGTATAGAAGA
GCTTGAGTATCAATGCTGTTGCCGAGACAAGCTTAAGGAGGCTGAGAAAA
TAGGAGAGGGAGCATTGCAGCTGCAAAGAGAAGTATTTGGTGAGCAACAT
AGATTTTCTCGTCAAAGTATGAGAAGTCTTGTTTTCATATATTCTCGACA
AGGCAGGTTTGATAAGGTTGAGGAAATAGAGAATAGATTGTCCCAAAGCA
GAGCAAGTCATGGGTGAACATATCATGAGCAAGACAAGC
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Coding sequence (CDS) from alignment at ch3:102538..104726+

>KJC3_002979-T1 ID=KJC3_002979-T1|Name=KJC3_002979-T1|organism=Aspergillus niger KJC3|type=CDS|length=2142bp|location=Sequence derived from alignment at ch3:102538..104726+ (Aspergillus niger KJC3)
ATGGCGCGAGCTTTCACCTATTCTCCTTTAGATCCGTCCTCTAAATGTAT
TAGGCTTCTCGAATTGCTGCCATCTGCAGCGCATGAATCGGTTCGCTGCA
GACTACATGTTGTCGACCAAACCTGCCGTCCGTCTTACGTTGCTTTATCA
TACACCTGGGGTTCTCCGCACAGCAGGCTATCAATTGAGTTGGACGATGC
GGAGTTCCACGTGCAAGAAAATCTTTGGAATTTTCTGGACACTATGAACT
CTTGCCAGAGATGGCGGCTTTTCTGGATTGACGCTATATGTATCGATCAG
TCCTGTATTTCGGAGCGGAATCACCAAGTCAACATGATGAGGGATATATA
TGCCGGAGCAACACTCACGGTGGTATGGTTAGGCCAAGCCTTTGATTTCT
GTGACCTCGCCATTAGATATATCGCAAATCCAGGTTTACCAATTAAAGAG
ACCACATCAGCCTTGGAGAAAGCGTTGAAAAGTCTACTGGAGCAACCGTA
TTGGAGTCGCATATGGATCGTCCAAGAGCTCATGCTCGCAAAAAACGTCA
TATTCTACTGCGGCAGAACCAGCTTTACTTGGCATCAGTTGGCATCTCTT
CGCCAGAAGATAAAAACCCATGTCGCCCATCATGATTCATTGGGTATCTC
GAAGTGTATAGGTTCGGTAATGGTCGCGCAGAAAACGCTATGGGATAACC
TTCCCAAAGATGACCCGCACTTACCCCTCTCGGATTTGCTGATTACGTAT
GGAAGACATAAAAGTTCAGATGTAAGGGATAGAGTGTATGCACTGCTTGG
TCTTTCTTCGGAAAATTCAATCCAGGCGGACTATAATCTATCAGTGGAAC
ACATATATATCGAGGTACTGGAAGCAATCTGCAAAGAGAGAAACCCCAGA
CACCAGCTCTCCACTATCGAACATACCTTACAGGAAATGTTGTGCTTGCA
AGAGGGCCCCAGGAAACCCAGAAACCAGCTCTCCACCATCGAACATACGT
TACGGGAAATGCTGGGCCTCAGGAGACCACGGACCCCAAGTGGCCATCCT
ACACCTGGCGATGCCTTTGCGATCAGGGTCCTGGAACTACGGCGGCAGAA
GCTTGGCAATACGCACCCCCACGTTCTTGAAGGAATGGCCAGTCTCGCAC
AGCTATACAATGAGCAGGGCCAATCAAAGTTAGCTGAGCAAACCGGAATT
GAGGTACTGCAAATACGGAGAGAAATACTTGGTAATACACATCCTAGCGC
TCTTCAAAGCATGGCAAACCTTGTGTCAGTTTACCTCCGGCAAGGCAGGC
TTGACAAGGCCGAGAAAATGGGGAACAAAGTATTGCAGCTGCAAAGAGAA
ATACTCAGTGAGAAACATCCTGATACTCTTCAAAGCATGATAAATCTTAT
GTTGATATACCACGAGCAAGGCAAGATCAAGGAGACTGAGAAAATTAGGA
ATGAAGTGATTCAATGCTTGGCAAATCTTGTATCAATATACCGCGAGCAA
GGCAAGCTTAGGGAGGCTGAGGAATTGGGAGACAAAGTATTGCGGCTGCA
AAGAGAAATATTCAGTGAGAAACATCCTGATACTCTCCAAAGCATGATAA
ATCTTATGTTGATATACCACGAGCAAGGCAAGCTTAAGGAGACTGAGAAA
CTTGGAGATGAAGTTATTCAGTGCATGGCAAACCTTGTATCAATATACCG
CGAGCAAGGCAAGCTTAGGGAGGCTGAGGAATTGGGGGCCGAAGTGCTTC
AAAGCATGACAAATCTTGTGAAAATATGCTGTTGGCGAGACAGGCCTGGA
GAGGCCGAGAAAGTGGTTGACAAAGTGTTGCAATGCATGGCAAACATTAT
GTCAATATACCGTGAGCAAGGCAAGCTTAAGGAGGCCGACGAGGTAGGAT
ACAAAGTGTTTCAATGTATAGAAGAGCTTGAGTATCAATGCTGTTGCCGA
GACAAGCTTAAGGAGGCTGAGAAAATAGGAGAGGGAGCATTGCAGCTGCA
AAGAGAAGTATTTGGTGAGCAACATAGATTTTCTCGTCAAAGTATGAGAA
GTCTTGTTTTCATATATTCTCGACAAGGCAGGTTTGATAAGGTTGAGGAA
ATAGAGAATAGATTGTCCCAAAGCAGAGCAAGTCATGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002979KJC3_002979Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002979-T1.utr5p1KJC3_002979-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002979-T1.exon1KJC3_002979-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002979-T1.cdsKJC3_002979-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002979-T1.utr3p1KJC3_002979-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002979-T1KJC3_002979-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010730
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019734
DBxrefPFAM:PF13424
DBxrefPFAM:PF13374
DBxrefPFAM:PF06985
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:102538..104726 +
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