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KJC3_002980-T1, KJC3_002980-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002980-T1
Unique NameKJC3_002980-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:105892..107604-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002980-T1 ID=KJC3_002980-T1|Name=KJC3_002980-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1713bp|location=Sequence derived from alignment at ch3:105892..107604- (Aspergillus niger KJC3)
ATGGCCGAATCCTCCCATCCCCCTCCCCCGCCATCCACCGACGACGACCA
CTGGGCGCCCTGGCTGCCCTCCGCATATTCAGATGCTGTCCCAGGCTTGG
TAGACGCGGAGGCGCTCTCATCTCTGTCTCCTTCTTACTCACAGAATGAC
TACGGCTCGCTGGACATGCTTTCCCCCGATAACTTCGGGACCTCGCAGCC
GGATGCAACTGACACCACGACGATCATCCCCCCGCCCGATGACTATGTCA
ATGTCTCCCAATGGCTCGCTGGCGCCTATCGGCCCCCTGTCCCCTGCACC
TACTGTCAACAACACCGACTGCAGTGCCTTGTCATTCGCACCACCCCGGC
CAATCCGAACCCCGTCACCGCCTGTTCCAGTTGCGTCGCGCTCTTCCGCG
AATGTAGCCTCGCCCGTGGCGAGAAGCGTCACCCCGCAGGCTTCGAGACC
GTCTTTCCCGTGTTCAATCATTTGCATGGTGTAACCGAGTGGACCGAGGA
GGAGCTGTTCCCCACTCCGCACGCATTTCTAGTGTCGGCCTCATCGAATG
ACCAGGCGCAATCAGCGCATGGCCAAGAAAGAACAGAAGACGACGTACAG
CAGAAGCCGCGGTTTTCTCGGAAAGGAGCCAAGATATTGCGGGATTGGCT
GTATCGCAATCAACACGCTCCGTATCCCACAGACGAACAGAAAGCTGCAT
TTGCCCAGCAGACCGGCCTCACTGAGAAGCAGATATCTACTTGGTTCGCC
AATGCCCGGCGGCGCCACCGAATGGTCCACCGCACCTCCCGACCGAGTCA
GATCTTCCGGAGTGGCTCCCCAATGCCCATCGCCCGGTCGGTGGCCTTGA
CTCCAATGGAACGCTGGCAGCGATCCCCGCCGGACCAAGAGCCTGTATCC
GAGTCGGTTATTCAGCAAGCTATTGCCGCTGCCGACACGGATGCTCCTTG
GAATCACCCCAGCACCTCTGGCAATGCAAGTCCCAGCTCTCACCATTTCG
CATCCTCCATTTCGAGCATCGACAGTGAAACGTCGCAGGCTTCGTCTGAG
AGTTTCTCATCCGCCTGGAGTCATCAGTCCGAGAGCTATGTGCCGTTCCC
ACTGTCGGATGGGCGGCCGCGATCCCAGTCCCGTCGCAGACGGCCCAGAC
GCCAGTCGGCAGCGGCGAGCCCATACCAGTGTACCTTCTGTGTGGACGGT
TTCAAGAAAAAGCATGATTGGGTCCGTCATGAAAAGAGCGTACACCTGTC
ATTGGAGTCGTGGATATGTAGCGTGGGATCGGGCGTTCTGGATCTGGCCG
GCTCGGAGGTACTACGATGCGATTTCTGCGATTTCTCTCCACTTACTGAA
TCACATTTCTCGACCCATGAGTTCGATGTATGCGCGGATCGTCCGCTATC
GGAACGTTCCTTCCGACGCAAAGACCACTTGATCCAACACTTTCGCAAAT
TTCATCACTGCACTACGGTCCCCGCCCTACGCGTTGAGGCCTGTCGCGTT
GTGACGAACGATGTGCAGAGCCGTTGTGGATTTTGCCAACTAGTGTTGCC
GACGTGGGCAGCACGCGCAGATCATCTGGCGGAGCACTTCAAGAACGGAC
GGCGCATGGCGGACTGGTCGGGGGACTGGGGGCTGGAGCCCTTGTACCAG
GCCATGTTGCGAGATGCCGTCCTGCCCAGGGATCGGTCTGTATACTCCGA
AGGGGGTTCCTGA
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Coding sequence (CDS) from alignment at ch3:105892..107604-

>KJC3_002980-T1 ID=KJC3_002980-T1|Name=KJC3_002980-T1|organism=Aspergillus niger KJC3|type=CDS|length=1713bp|location=Sequence derived from alignment at ch3:105892..107604- (Aspergillus niger KJC3)
ATGGCCGAATCCTCCCATCCCCCTCCCCCGCCATCCACCGACGACGACCA
CTGGGCGCCCTGGCTGCCCTCCGCATATTCAGATGCTGTCCCAGGCTTGG
TAGACGCGGAGGCGCTCTCATCTCTGTCTCCTTCTTACTCACAGAATGAC
TACGGCTCGCTGGACATGCTTTCCCCCGATAACTTCGGGACCTCGCAGCC
GGATGCAACTGACACCACGACGATCATCCCCCCGCCCGATGACTATGTCA
ATGTCTCCCAATGGCTCGCTGGCGCCTATCGGCCCCCTGTCCCCTGCACC
TACTGTCAACAACACCGACTGCAGTGCCTTGTCATTCGCACCACCCCGGC
CAATCCGAACCCCGTCACCGCCTGTTCCAGTTGCGTCGCGCTCTTCCGCG
AATGTAGCCTCGCCCGTGGCGAGAAGCGTCACCCCGCAGGCTTCGAGACC
GTCTTTCCCGTGTTCAATCATTTGCATGGTGTAACCGAGTGGACCGAGGA
GGAGCTGTTCCCCACTCCGCACGCATTTCTAGTGTCGGCCTCATCGAATG
ACCAGGCGCAATCAGCGCATGGCCAAGAAAGAACAGAAGACGACGTACAG
CAGAAGCCGCGGTTTTCTCGGAAAGGAGCCAAGATATTGCGGGATTGGCT
GTATCGCAATCAACACGCTCCGTATCCCACAGACGAACAGAAAGCTGCAT
TTGCCCAGCAGACCGGCCTCACTGAGAAGCAGATATCTACTTGGTTCGCC
AATGCCCGGCGGCGCCACCGAATGGTCCACCGCACCTCCCGACCGAGTCA
GATCTTCCGGAGTGGCTCCCCAATGCCCATCGCCCGGTCGGTGGCCTTGA
CTCCAATGGAACGCTGGCAGCGATCCCCGCCGGACCAAGAGCCTGTATCC
GAGTCGGTTATTCAGCAAGCTATTGCCGCTGCCGACACGGATGCTCCTTG
GAATCACCCCAGCACCTCTGGCAATGCAAGTCCCAGCTCTCACCATTTCG
CATCCTCCATTTCGAGCATCGACAGTGAAACGTCGCAGGCTTCGTCTGAG
AGTTTCTCATCCGCCTGGAGTCATCAGTCCGAGAGCTATGTGCCGTTCCC
ACTGTCGGATGGGCGGCCGCGATCCCAGTCCCGTCGCAGACGGCCCAGAC
GCCAGTCGGCAGCGGCGAGCCCATACCAGTGTACCTTCTGTGTGGACGGT
TTCAAGAAAAAGCATGATTGGGTCCGTCATGAAAAGAGCGTACACCTGTC
ATTGGAGTCGTGGATATGTAGCGTGGGATCGGGCGTTCTGGATCTGGCCG
GCTCGGAGGTACTACGATGCGATTTCTGCGATTTCTCTCCACTTACTGAA
TCACATTTCTCGACCCATGAGTTCGATGTATGCGCGGATCGTCCGCTATC
GGAACGTTCCTTCCGACGCAAAGACCACTTGATCCAACACTTTCGCAAAT
TTCATCACTGCACTACGGTCCCCGCCCTACGCGTTGAGGCCTGTCGCGTT
GTGACGAACGATGTGCAGAGCCGTTGTGGATTTTGCCAACTAGTGTTGCC
GACGTGGGCAGCACGCGCAGATCATCTGGCGGAGCACTTCAAGAACGGAC
GGCGCATGGCGGACTGGTCGGGGGACTGGGGGCTGGAGCCCTTGTACCAG
GCCATGTTGCGAGATGCCGTCCTGCCCAGGGATCGGTCTGTATACTCCGA
AGGGGGTTCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002980KJC3_002980Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002980-T1.cdsKJC3_002980-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002980-T1.exon1KJC3_002980-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002980-T1KJC3_002980-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR017970
DBxrefInterPro:IPR008422
DBxrefInterPro:IPR001356
DBxrefInterPro:IPR013087
DBxrefPFAM:PF00046
DBxrefPFAM:PF05920
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:105892..107604 -
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