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KJC3_002990-T1, KJC3_002990-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002990-T1
Unique NameKJC3_002990-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:139262..140408+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002990-T1 ID=KJC3_002990-T1|Name=KJC3_002990-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1147bp|location=Sequence derived from alignment at ch3:139262..140408+ (Aspergillus niger KJC3)
ATGACGCTTCCCAAGTCCGGCGTGCTCGTGCCCTTGTACATCTATCCCTT
AACTCCGACCACCTGGGATCCACTGTATAACGCGTAAAGTTTACCTACCT
TCTTTCTTGTTTGCTTGCTTTTTCTTCACTTTTTTTTTTTTTCTTTTCTC
TCTGGTTGATGGTCTATCTACATGATTCTTGCCTAGCAAAGTGACACTGA
TGGGTAGGGAGTGTACCTGTAGAATCGCTGCCTATCCCGACCTCGAGTTC
CTGGTGATCGTCAACCCCAACAGTGGACCCGGTGCCTTGCCGTGCCCCGA
TGCCAATTATGCGCGCGAAGTGGCCCGCCTGAATGCCTGCCCTAATGTCT
ATCCCATCGGCTATATCCGCATCGACTATTGCCGAAAGCCATTGGCCGTT
GCCTGTGAGGAGATCGATCGCTATGCCAGCTGGGCCGCCGAGTATGCCAC
TACCGGCTTAGGCGTGGGTGGCATCATGGTCGATGAGACTCCCAACCACT
TCAATGCCGCTCAGGCCGAGTATTTGCGCGCGCTTCATAGTCACATCAAG
GCTTGCTCGGGCCTTCTCCGCGACCGATTGGTAAGCATTTGTACCCTCTT
ATTATGACTATTATGATGGTGGTTTTCTTTTTTTCCTTTGGTTCAGCCAC
TGCCCCTCCCTCTCTCTCCTCATTCTCCGACCTTGGTGGCGGAGAAGAAA
AATGAAAATTCCGACAGCTGTTTTCTGTCTCACTAAGACCCGACAAATGA
GAAAACATGGAACAACGTGGTCAATTCATTTCTAATAATAATCATAATAA
TAATAACGATGATGATGATGATGCAGGTGGTACACAACCCAGGCACCCCC
CCGGATCCCGAGATGGCCGATGCAGGCTCAGATCTCCTGCTGGTCTGTGA
GGAGCCTTTTGCACGCTGGCAAACCAATGAGGTGCAGCATCGTCTAGGCG
AGCTTCCATATCCTCGCGATCGCTGCGGCTACATGGTCACGGAAGTTCCG
AACCATCATATTCCCGCCCTGGTGCGCGATCTGCGTCGTCGTGCCGCCTA
CATATTTGTCACCGAAATCGTAGGCGATTTCTACGAGCGCTTCGGTCCCT
CCAGCTGGGGCATATTGATGGAGACTTTGTCGGAATTGGGACAGTAG
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Coding sequence (CDS) from alignment at ch3:139262..140408+

>KJC3_002990-T1 ID=KJC3_002990-T1|Name=KJC3_002990-T1|organism=Aspergillus niger KJC3|type=CDS|length=2286bp|location=Sequence derived from alignment at ch3:139262..140408+ (Aspergillus niger KJC3)
ATGACGCTTCCCAAGTCCGGCGTGCTCGTGCCCTTGTACATCTATCCCTT
AACTCCGACCACCTGGGATCCACTGTATAACGCAATCGCTGCCTATCCCG
ACCTCGAGTTCCTGGTGATCGTCAACCCCAACAGTGGACCCGGTGCCTTG
CCGTGCCCCGATGCCAATTATGCGCGCGAAGTGGCCCGCCTGAATGCCTG
CCCTAATGTCTATCCCATCGGCTATATCCGCATCGACTATTGCCGAAAGC
CATTGGCCGTTGCCTGTGAGGAGATCGATCGCTATGCCAGCTGGGCCGCC
GAGTATGCCACTACCGGCTTAGGCGTGGGTGGCATCATGGTCGATGAGAC
TCCCAACCACTTCAATGCCGCTCAGGCCGAGTATTTGCGCGCGCTTCATA
GTCACATCAAGGCTTGCTCGGGCCTTCTCCGCGACCGATTGGTGGTACAC
AACCCAGGCACCCCCCCGGATCCCGAGATGGCCGATGCAGGCTCAGATCT
CCTGCTGGTCTGTGAGGAGCCTTTTGCACGCTGGCAAACCAATGAGGTGC
AGCATCGTCTAGGCGAGCTTCCATATCCTCGCGATCGCTGCGGCTACATG
GTCACGGAAGTTCCGAACCATCATATTCCCGCCCTGGTGCGCGATCTGCG
TCGTCGTGCCGCCTACATATTTGTCACCGAAATCGTAGGCGATTTCTACG
AGCGCTTCGGTCCCTCCAGCTGGGGCATATTGATGGAGACTTTGTCGGAA
TTGGGACAGTAGATGACGCTTCCCAAGTCCGGCGTGCTCGTGCCCTTGTA
CATCTATCCCTTAACTCCGACCACCTGGGATCCACTGTATAACGCAATCG
CTGCCTATCCCGACCTCGAGTTCCTGGTGATCGTCAACCCCAACAGTGGA
CCCGGTGCCTTGCCGTGCCCCGATGCCAATTATGCGCGCGAAGTGGCCCG
CCTGAATGCCTGCCCTAATGTCTATCCCATCGGCTATATCCGCATCGACT
ATTGCCGAAAGCCATTGGCCGTTGCCTGTGAGGAGATCGATCGCTATGCC
AGCTGGGCCGCCGAGTATGCCACTACCGGCTTAGGCGTGGGTGGCATCAT
GGTCGATGAGACTCCCAACCACTTCAATGCCGCTCAGGCCGAGTATTTGC
GCGCGCTTCATAGTCACATCAAGGCTTGCTCGGGCCTTCTCCGCGACCGA
TTGGTGGTACACAACCCAGGCACCCCCCCGGATCCCGAGATGGCCGATGC
AGGCTCAGATCTCCTGCTGGTCTGTGAGGAGCCTTTTGCACGCTGGCAAA
CCAATGAGGTGCAGCATCGTCTAGGCGAGCTTCCATATCCTCGCGATCGC
TGCGGCTACATGGTCACGGAAGTTCCGAACCATCATATTCCCGCCCTGGT
GCGCGATCTGCGTCGTCGTGCCGCCTACATATTTGTCACCGAAATCGTAG
GCGATTTCTACGAGCGCTTCGGTCCCTCCAGCTGGGGCATATTGATGGAG
ACTTTGTCGGAATTGGGACAGTAGATGACGCTTCCCAAGTCCGGCGTGCT
CGTGCCCTTGTACATCTATCCCTTAACTCCGACCACCTGGGATCCACTGT
ATAACGCAATCGCTGCCTATCCCGACCTCGAGTTCCTGGTGATCGTCAAC
CCCAACAGTGGACCCGGTGCCTTGCCGTGCCCCGATGCCAATTATGCGCG
CGAAGTGGCCCGCCTGAATGCCTGCCCTAATGTCTATCCCATCGGCTATA
TCCGCATCGACTATTGCCGAAAGCCATTGGCCGTTGCCTGTGAGGAGATC
GATCGCTATGCCAGCTGGGCCGCCGAGTATGCCACTACCGGCTTAGGCGT
GGGTGGCATCATGGTCGATGAGACTCCCAACCACTTCAATGCCGCTCAGG
CCGAGTATTTGCGCGCGCTTCATAGTCACATCAAGGCTTGCTCGGGCCTT
CTCCGCGACCGATTGGTGGTACACAACCCAGGCACCCCCCCGGATCCCGA
GATGGCCGATGCAGGCTCAGATCTCCTGCTGGTCTGTGAGGAGCCTTTTG
CACGCTGGCAAACCAATGAGGTGCAGCATCGTCTAGGCGAGCTTCCATAT
CCTCGCGATCGCTGCGGCTACATGGTCACGGAAGTTCCGAACCATCATAT
TCCCGCCCTGGTGCGCGATCTGCGTCGTCGTGCCGCCTACATATTTGTCA
CCGAAATCGTAGGCGATTTCTACGAGCGCTTCGGTCCCTCCAGCTGGGGC
ATATTGATGGAGACTTTGTCGGAATTGGGACAGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002990KJC3_002990Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002990-T1.exon1KJC3_002990-T1.exon1Aspergillus niger KJC3exon
KJC3_002990-T1.exon2KJC3_002990-T1.exon2Aspergillus niger KJC3exon
KJC3_002990-T1.exon3KJC3_002990-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002990-T1.cdsKJC3_002990-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002990-T1KJC3_002990-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteCAZy:GH135
DBxrefInterPro:IPR021986
DBxrefPFAM:PF12138
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:139262..140408 +
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