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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:142038..143469+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002992-T1 ID=KJC3_002992-T1|Name=KJC3_002992-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1432bp|location=Sequence derived from alignment at ch3:142038..143469+ (Aspergillus niger KJC3)
GGCTGCTGCTGCTGCGGTTACTATTATTATTGTCCATTCCTTTATACTTT
CTCCATCAGCTGCGCCATGTCTGTTATCTGTGCCTCTGAAGGAAGCTCGC
CAGTGCCCACGCCCTTATTCTCCGCACCTACGACTCCCGAGACCGAGCGG
GATGAATACTTCGACGAACCTTCCCTGCCGGTCCAGGATGACGCCCCATA
TGTACTCGTCACCGGCGGACTAGGATACATCGGCAGCCACACCACTCTGG
AGTTGCTCAAGGCTGGCTACAACGTGATCATTGTGGATGACCTGAGCAAT
AGCTTCCACCACGTCTTCGACCGGATTCTGCTGGCAGCCAAGCAACACTT
TGACCGGACGGGAGGCCACTGTCCACGGGCCGAGCTGAGATGTATCGACT
TTCGCGACGTGCCCGCCATGCGCGCCCTGCTGGCCTCGTACACAATGGAG
TCATCATCACTAGACACCAACGATAGCATCACTCAGTCCCGATCCAGAAT
CGTAGGAGTGATCCACTTCGCCGCCTTCAAGGACGTCAACGACAGTCTGC
GCAATCCCCTCAAGTACTATCACAACAACGTCACCGGATTAGTAGACCTA
GTCAGCCTACTCGCGGACCACGACATCAAAACCTTCATCTTCTCCTCCTC
AGCCAACGTCTACGGCACATTAGCCCAGAACCACGGCACCTTGCGCGAGG
AGCACTGCGTGCACCAACCCGAGACATACCACAGTGCCTCCTCTGGCGAA
CCCATAACATCCGAGCAAGGCTGCACAGGGATCACAAACCCCTACGGCCG
CACCAAATGGATCGGCGAAGCCATTCTCTCCGACGTAGCAACCTCCGATC
CATCCTGGACCATCATAGGTCTCCGATACTTCAACCCCATCGGATGCGAC
CCGTCGGGTCTCCTGGGTGAAGATCCCCGCGGAACACCCTCAAACCTCGT
CCCGGTAGTCGTGCAAGTCCTGACGGGTCAACTACCAGCTTTATCCGTCT
ACGGAACCGACTGGGAGACTCCCGACGGCACCGCCATCCGCGATTTCATC
CACGTGTCGGACGTGGCGCGCGGACATACGGCAGCCCTGGCGGCAGCGCT
AGCCGGACAGGTAAAGACGAATTTCCGCACGTTTAACCTGGGGACCGGGC
GAGGGCATTCCGTGGCGGAGGTGGTGTCCGCGATGGAGGGCGTCAGTCAT
CAGTCTATTCCAAGACGGCTGGCGGAGAGGAGGCCCGGGGATGTGCAGGA
GTGCGTGGCGGTTCCGGAGAGGGCAGCTTGTGAGTTAGGATGGGAGGCGG
AGAAGTCCTTGCAGGATGCGTGTGAGGATTTGTGGCATTCGTTGAGGGGT
GGGTCGGTGGATGTGATGATGGATTGATGATAGAGGATGGAAGGTTAAAG
GGATGGGATGGGATGGGGTTGTGCATTATGGT back to topCoding sequence (CDS) from alignment at ch3:142038..143469+ >KJC3_002992-T1 ID=KJC3_002992-T1|Name=KJC3_002992-T1|organism=Aspergillus niger KJC3|type=CDS|length=1311bp|location=Sequence derived from alignment at ch3:142038..143469+ (Aspergillus niger KJC3)
ATGTCTGTTATCTGTGCCTCTGAAGGAAGCTCGCCAGTGCCCACGCCCTT
ATTCTCCGCACCTACGACTCCCGAGACCGAGCGGGATGAATACTTCGACG
AACCTTCCCTGCCGGTCCAGGATGACGCCCCATATGTACTCGTCACCGGC
GGACTAGGATACATCGGCAGCCACACCACTCTGGAGTTGCTCAAGGCTGG
CTACAACGTGATCATTGTGGATGACCTGAGCAATAGCTTCCACCACGTCT
TCGACCGGATTCTGCTGGCAGCCAAGCAACACTTTGACCGGACGGGAGGC
CACTGTCCACGGGCCGAGCTGAGATGTATCGACTTTCGCGACGTGCCCGC
CATGCGCGCCCTGCTGGCCTCGTACACAATGGAGTCATCATCACTAGACA
CCAACGATAGCATCACTCAGTCCCGATCCAGAATCGTAGGAGTGATCCAC
TTCGCCGCCTTCAAGGACGTCAACGACAGTCTGCGCAATCCCCTCAAGTA
CTATCACAACAACGTCACCGGATTAGTAGACCTAGTCAGCCTACTCGCGG
ACCACGACATCAAAACCTTCATCTTCTCCTCCTCAGCCAACGTCTACGGC
ACATTAGCCCAGAACCACGGCACCTTGCGCGAGGAGCACTGCGTGCACCA
ACCCGAGACATACCACAGTGCCTCCTCTGGCGAACCCATAACATCCGAGC
AAGGCTGCACAGGGATCACAAACCCCTACGGCCGCACCAAATGGATCGGC
GAAGCCATTCTCTCCGACGTAGCAACCTCCGATCCATCCTGGACCATCAT
AGGTCTCCGATACTTCAACCCCATCGGATGCGACCCGTCGGGTCTCCTGG
GTGAAGATCCCCGCGGAACACCCTCAAACCTCGTCCCGGTAGTCGTGCAA
GTCCTGACGGGTCAACTACCAGCTTTATCCGTCTACGGAACCGACTGGGA
GACTCCCGACGGCACCGCCATCCGCGATTTCATCCACGTGTCGGACGTGG
CGCGCGGACATACGGCAGCCCTGGCGGCAGCGCTAGCCGGACAGGTAAAG
ACGAATTTCCGCACGTTTAACCTGGGGACCGGGCGAGGGCATTCCGTGGC
GGAGGTGGTGTCCGCGATGGAGGGCGTCAGTCATCAGTCTATTCCAAGAC
GGCTGGCGGAGAGGAGGCCCGGGGATGTGCAGGAGTGCGTGGCGGTTCCG
GAGAGGGCAGCTTGTGAGTTAGGATGGGAGGCGGAGAAGTCCTTGCAGGA
TGCGTGTGAGGATTTGTGGCATTCGTTGAGGGGTGGGTCGGTGGATGTGA
TGATGGATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002992-T1.utr5p1 | KJC3_002992-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002992-T1.utr3p1 | KJC3_002992-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR001509 |
| DBxref | PFAM:PF07993 |
| DBxref | PFAM:PF16363 |
| DBxref | PFAM:PF01370 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:142038..143469 + |
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