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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:159335..161267+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002998-T1 ID=KJC3_002998-T1|Name=KJC3_002998-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1933bp|location=Sequence derived from alignment at ch3:159335..161267+ (Aspergillus niger KJC3)
GAGGGTCTGGAGGAAAAAAGCTTGTGTGGCGTAGACAAGTTAAGACACGG
GCCAGAGGCCGAATAAAAAGGGGCCAGCCATTGATGACCTCCACTCATTG
CTGGAAATACCTCGGAAGCTTCCGACACAAGCTCGGGTCAAGCAATGGTT
CAGCGTAGGCATCCATCAAATAAGGTTCCGCTGAGGGAAATAAGAGGACT
AACAGAATCTGAAAGGACCAAATAGCAAGAACAAGTCCATTCCCAAGTCT
GACTGGTGGTGGTGAAGGGAAGACGACGGGCGGGCTTGCGTGGTCAGCCT
TATAGGGCGCGTGTGCTGCTGCTGCAATCGGACTCCGCGGATTCCCTCTC
TTTTGAACGGGATCGATTGAAACCTGGCTGCCTACCAGGTCCCTGATCCA
TCTCAATTCTATCTTCTTCCCAATACTACTACTGCAGTGCTCACGATATT
CATAGTACTTATCTATACGCCATATCGGCACATCCCCCCCCCGCCATCTC
CCCTAGTCATTTAGTCTCCTGTTCTGTTCCGTTCCCCTCATGAATCCCTC
CATTTGACCGACTGCTATCTTGGCAAACCGTCACTCTTTACAGATTCATT
CATACTTTCTTTATCTATTTTATTTTTTGGTTGCGCATCAGTCATCATGC
GTCTCCGTTTTCTGTGTGTAGTGGGCGCCTGGCTGGCCAGCTGTGCTGCC
AGTCCAGTTGCCAGTCGTTCTGCGGATGCTTCCGTGCCCCAAAAGGCACT
TGCAAACTCGCACGCCTCCTTCCCCATCGTCACCGGCCATGAGATCCATA
TTCCATATGCTACAATCCCAGGATTCAAGGAGGATGAGGCCAAGGATACC
CCCAGACCATATCTGGTACGTGCGCCCGTACTAACAATGGTCGGAAAAGG
CCCAAGCATCACTAACCTTGTCATCTAGGCGATGAAAATCCGCACGGAGA
GCAATGCTCTATTTGTTAATGATGTTTCCGTCTTCCCGAGTTCGTTTCCC
ATGCACTTACCGGCAACCCGATACCAGGACGTGTCCGGTCAAAATCCGGA
GCATCTGCTCCTGCAGTACGCGGTGGACATCGAATACATGCCCCCCCGTC
CCGATGGATCCTTGGTGCAAGACATCTACCGTGTGCAACTCAAGTTTTTC
GATCTCTCCGGCCATCCTGCCACGACGGACACCGTCCACGTTCGATTGTC
CTCGCAGCAGTCGGGCGAACTGTACATCACACAGATCATCGTCGAGCCAC
TTCTCGACTATTACCATGATGCTCACGGCGATGGAAACTGTGTCTGGCGC
ACCAAGTACTGGAACCTGATTATGGAAAAGTACCGTGCCTGGCGCGAGCA
GAAAGGACACGACCATCACAAAGGGCCCGAGTCGCAGAAGAGTGACAGCC
ACGAGCACAATGACCATCATCATCACCCCAAGGCAAACAGCCCCGTCTCC
AAGGAACAGCCCACAGCACACCAGGAGGCTCAAGAGAACAGGCCACTTCC
CAAGGCTGATCCCAGCAACAGTGCACCCGAGTCCCCGTTCCGGGTGTATG
GGGTGGACAAGTCTCTGCGACGGACAGCTTTGCGTAACAAGGATTACCGC
CGGGACTTCTGGCGACTGGTAGTGCCCGCCATCATCCCGGGACTCCTGGG
CGCGGTGGCTGGATTGGTAGTGTGCACGATGGGGCTGCTCCTCTGGAAGA
TGGTGGCATGCACGTGTGCCAGGATGCAGGGTCGGAGATGTCGGAAGCAT
TGCCAACGGAAGCAAGGCGTTTGCTTATCGGAAAAGCAACGTCTGCTGCA
GCAGGATCAGCTGAGTGAGGCGTAGTAGTTAGTTAGTTGTTCAGTTACTC
CATTATTAAGCAGGGATGCTATTCGTTATTGTGTGGGGGCTGAGTCGCAG
ATGCACAGCTAAATATTATTGATTGATGTAAAC back to topCoding sequence (CDS) from alignment at ch3:159335..161267+ >KJC3_002998-T1 ID=KJC3_002998-T1|Name=KJC3_002998-T1|organism=Aspergillus niger KJC3|type=CDS|length=2232bp|location=Sequence derived from alignment at ch3:159335..161267+ (Aspergillus niger KJC3)
ATGCGTCTCCGTTTTCTGTGTGTAGTGGGCGCCTGGCTGGCCAGCTGTGC
TGCCAGTCCAGTTGCCAGTCGTTCTGCGGATGCTTCCGTGCCCCAAAAGG
CACTTGCAAACTCGCACGCCTCCTTCCCCATCGTCACCGGCCATGAGATC
CATATTCCATATGCTACAATCCCAGGATTCAAGGAGGATGAGGCCAAGGA
TACCCCCAGACCATATCTGGCGATGAAAATCCGCACGGAGAGCAATGCTC
TATTTGTTAATGATGTTTCCGTCTTCCCGAGTTCGTTTCCCATGCACTTA
CCGGCAACCCGATACCAGGACGTGTCCGGTCAAAATCCGGAGCATCTGCT
CCTGCAGTACGCGGTGGACATCGAATACATGCCCCCCCGTCCCGATGGAT
CCTTGGTGCAAGACATCTACCGTGTGCAACTCAAGTTTTTCGATCTCTCC
GGCCATCCTGCCACGACGGACACCGTCCACGTTCGATTGTCCTCGCAGCA
GTCGGGCGAACTGTACATCACACAGATCATCGTCGAGCCACTTCTCGACT
ATTACCATGATGCTCACGGCGATGGAAACTGTGTCTGGCGCACCAAGTAC
TGGAACCTGATTATGGAAAAGTACCGTGCCTGGCGCGAGCAGAAAGGACA
CGACCATCACAAAGGGCCCGAGTCGCAGAAGAGTGACAGCCACGAGCACA
ATGACCATCATCATCACCCCAAGGCAAACAGCCCCGTCTCCAAGGAACAG
CCCACAGCACACCAGGAGGCTCAAGAGAACAGGCCACTTCCCAAGGCTGA
TCCCAGCAACAGTGCACCCGAGTCCCCGTTCCGGGTGTATGGGGTGGACA
AGTCTCTGCGACGGACAGCTTTGCGTAACAAGGATTACCGCCGGGACTTC
TGGCGACTGGTAGTGCCCGCCATCATCCCGGGACTCCTGGGCGCGGTGGC
TGGATTGGTAGTGTGCACGATGGGGCTGCTCCTCTGGAAGATGGTGGCAT
GCACGTGTGCCAGGATGCAGGGTCGGAGATGTCGGAAGCATTGCCAACGG
AAGCAAGGCGTTTGCTTATCGGAAAAGCAACGTCTGCTGCAGCAGGATCA
GCTGAGTGAGGCGTAGATGCGTCTCCGTTTTCTGTGTGTAGTGGGCGCCT
GGCTGGCCAGCTGTGCTGCCAGTCCAGTTGCCAGTCGTTCTGCGGATGCT
TCCGTGCCCCAAAAGGCACTTGCAAACTCGCACGCCTCCTTCCCCATCGT
CACCGGCCATGAGATCCATATTCCATATGCTACAATCCCAGGATTCAAGG
AGGATGAGGCCAAGGATACCCCCAGACCATATCTGGCGATGAAAATCCGC
ACGGAGAGCAATGCTCTATTTGTTAATGATGTTTCCGTCTTCCCGAGTTC
GTTTCCCATGCACTTACCGGCAACCCGATACCAGGACGTGTCCGGTCAAA
ATCCGGAGCATCTGCTCCTGCAGTACGCGGTGGACATCGAATACATGCCC
CCCCGTCCCGATGGATCCTTGGTGCAAGACATCTACCGTGTGCAACTCAA
GTTTTTCGATCTCTCCGGCCATCCTGCCACGACGGACACCGTCCACGTTC
GATTGTCCTCGCAGCAGTCGGGCGAACTGTACATCACACAGATCATCGTC
GAGCCACTTCTCGACTATTACCATGATGCTCACGGCGATGGAAACTGTGT
CTGGCGCACCAAGTACTGGAACCTGATTATGGAAAAGTACCGTGCCTGGC
GCGAGCAGAAAGGACACGACCATCACAAAGGGCCCGAGTCGCAGAAGAGT
GACAGCCACGAGCACAATGACCATCATCATCACCCCAAGGCAAACAGCCC
CGTCTCCAAGGAACAGCCCACAGCACACCAGGAGGCTCAAGAGAACAGGC
CACTTCCCAAGGCTGATCCCAGCAACAGTGCACCCGAGTCCCCGTTCCGG
GTGTATGGGGTGGACAAGTCTCTGCGACGGACAGCTTTGCGTAACAAGGA
TTACCGCCGGGACTTCTGGCGACTGGTAGTGCCCGCCATCATCCCGGGAC
TCCTGGGCGCGGTGGCTGGATTGGTAGTGTGCACGATGGGGCTGCTCCTC
TGGAAGATGGTGGCATGCACGTGTGCCAGGATGCAGGGTCGGAGATGTCG
GAAGCATTGCCAACGGAAGCAAGGCGTTTGCTTATCGGAAAAGCAACGTC
TGCTGCAGCAGGATCAGCTGAGTGAGGCGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002998-T1.utr5p1 | KJC3_002998-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002998-T1.utr3p1 | KJC3_002998-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:159335..161267 + |
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