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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:166560..168003+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003001-T1 ID=KJC3_003001-T1|Name=KJC3_003001-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1444bp|location=Sequence derived from alignment at ch3:166560..168003+ (Aspergillus niger KJC3)
CCCTGACCCGTGAGTACAAACCTTGCACAACATCCAAGCCCCAACAATTA
TCCCTCTTATATTATAACTACTCCCATTCGTTCCAAACACATATACATTC
AATGGTCGCCACCATCTCAAGAACAGTTTTTCCCTCGAAGCGAAGGGTTG
AACGGACCTAAGGGGCCTTAGCCTTGCGCTAAGCATCCTCATTTCCGACG
CTAAATTACATCCGAATGCTACCATGTGAGACCTACCCAATCAGCACCTC
CAGTGACGGTCATAGCGGCCCCGGGGTTCTCGTATTAGCGGACCCTGGTT
GGAAAGACGACCGAACATGGCGGCTCTACAGATTTTGTTTGATGCCCATT
CGACTACCTACTCGCTTGAGTCAATTCCCAAGGCTCTCAATATGGGGACC
GTCAGCATGTCCTGAAAATGAGAAGAGCTTGGCTCTGCAGCCAAGGCAAT
AGAAAGGGGAATAAGAGCGCCCCTTTCCAGCTTTTTCCCCAGATACTATA
ACCCCCATCCGTCAACAATTCCTCTCTACTATACAACCGAACTCGACCAA
ATCTCAGAAACCCAGAGATAGGTCACCCTCGCCACCACCATGCGCACCTC
CTACCTCCTCGCCGCAGCCCTCACCCTCTTCGGCGGTGCCCGCGCCGACG
ATGACAGCACCACAACAGTGGGCTACTTCATCCCCAACTGGTCCGCGACC
TACCTAGAATACGGCGGCTGGACCAGCACCGGCGCCAGTGTCGCGGGGAT
CAACGCCGTAAAGACCACCTACAAAGTGGGCTGTTTGAAAGACGCGCCCA
AGACCGACTGCAACATGAAGGACGCATACACGATCATCCAAGGCCCGGAC
ACCATCAGCCTGAGCCAGGTGTACACTGCTTCGACGTCGGACAAGTCCAC
CAGCTACGACGTCACGGTGACGCGGTCGTACGAATGCTCGTTGAAGTCAT
GGACAGAGTCAGCGAGTTGCACCATGAGCGTGGGAATGAGTGGAAGTGAC
AATGGCGGAACGTATGCTTCGTCGTCGTCCACCAAGTCAACCTATGAGAG
CCCGACTAGCTCGTACTATTACCTTGTCGTGACGGGTGGTGTCAAGTCGT
TCACGGAGCCCGCGGCTACCAAGACTCCTGATGCTGCTGCTGGTTTGGCG
GCCCCTGTTGCGGCGATGATTACGGCGGCCCCTGTTGCTGCCGCGGCTGT
GGTTGCTGCGGCTTGGGCTTAAGGACGTGGATGAATGAACTGATCTGGTC
TTTGGAAGGTACAATTGGGGACTAGCCATTGATGATAACGTGGAAGGATC
GGATCAAACTGGTGGGAGCACTGCGGTTGCTAAATATTTTAATCAGTTGT
TGTTTGTTGCTTTGCTATTGCGTGTGTGTTGCCCTTTGTATACCCTGAAG
TTGTTAGTAATGGATATAATGGATCGACGTTACGAATGCATGCC back to topCoding sequence (CDS) from alignment at ch3:166560..168003+ >KJC3_003001-T1 ID=KJC3_003001-T1|Name=KJC3_003001-T1|organism=Aspergillus niger KJC3|type=CDS|length=633bp|location=Sequence derived from alignment at ch3:166560..168003+ (Aspergillus niger KJC3)
ATGCGCACCTCCTACCTCCTCGCCGCAGCCCTCACCCTCTTCGGCGGTGC
CCGCGCCGACGATGACAGCACCACAACAGTGGGCTACTTCATCCCCAACT
GGTCCGCGACCTACCTAGAATACGGCGGCTGGACCAGCACCGGCGCCAGT
GTCGCGGGGATCAACGCCGTAAAGACCACCTACAAAGTGGGCTGTTTGAA
AGACGCGCCCAAGACCGACTGCAACATGAAGGACGCATACACGATCATCC
AAGGCCCGGACACCATCAGCCTGAGCCAGGTGTACACTGCTTCGACGTCG
GACAAGTCCACCAGCTACGACGTCACGGTGACGCGGTCGTACGAATGCTC
GTTGAAGTCATGGACAGAGTCAGCGAGTTGCACCATGAGCGTGGGAATGA
GTGGAAGTGACAATGGCGGAACGTATGCTTCGTCGTCGTCCACCAAGTCA
ACCTATGAGAGCCCGACTAGCTCGTACTATTACCTTGTCGTGACGGGTGG
TGTCAAGTCGTTCACGGAGCCCGCGGCTACCAAGACTCCTGATGCTGCTG
CTGGTTTGGCGGCCCCTGTTGCGGCGATGATTACGGCGGCCCCTGTTGCT
GCCGCGGCTGTGGTTGCTGCGGCTTGGGCTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003001-T1.utr5p1 | KJC3_003001-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003001-T1.utr3p1 | KJC3_003001-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:166560..168003 + |
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