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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:194697..195668- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003012-T1 ID=KJC3_003012-T1|Name=KJC3_003012-T1|organism=Aspergillus niger KJC3|type=mRNA|length=972bp|location=Sequence derived from alignment at ch3:194697..195668- (Aspergillus niger KJC3)
ATGGCTGATGTAAGAATGTCTGCCGATTTGAACCTCTACGGCCCCCTCTC
GGGACCCCCCTCCACCACTGAAGAGACCTGGCCCGGCGGGCTTCCTTTCT
ATCTCGACAATACCATTCCTCAGGACTGTCTTTCTCTTCCTCTGTTCGAC
GATAACAACTCATGGATGCTCAATTCCTTCGAGCCGCCGCCCGTGTCTTG
GGCGACTGGACCCGCTCTCCGAACCAACTCCACCGCTAGCTCCGAAGCCA
GCTTCATCGCGCCCTGCCAGACCGTACACAATCCTACCACTACCAGTGAT
TACGAGCAAAAATGCTCCCCGATGCAGAATACCATTCCGCAATTCGCACC
GGCACAGATGCCTCCAGCTCCTATGCATGAAATCACCTCGCGAGGTAGCA
TCACGAGCGTTAGCAGCGGTGGCAGTGCCGACAGCAACCAATCCCGGTTC
AGTATTTCCAGCTACAGCAGCAGTAACGAGAGCCCGACATATAGCCGTCG
AGGCAGCTCCAATCGGCCTCCCTCTCCGGGATTTGAAGTGAACGAGCGCG
AACGACGGAAACGGGAGCGCTTCCTCGAGCGCAACCGCGTGGCTGCCAAC
AAATGTCGCAAGAAGAAGAAGGAGCATGCCAAGCAGCTGGAGAGTCGCTG
CGAGACAGTTTCACGGGAGAATACGCTCCTGGAAAGCCAAGTGGATCACC
TGCGGGGCGAAATCTTGAACCTTAAGAATGAGCTGCTGCGACATTCCCAC
TGCGGGGATGAGAGGATTAAGTGCCATTTGGCGAAAATGGTGAAGCAGCT
TTCTGATAAAGCTGGCACGACAACTCAGAGTCCGGAGAAGAAGACAGAGT
CATTACCTCCGACGGAGAGTCCCAAGCAGGAGCAGGATATGGCAATGGAT
CTGGAAGATCTGGTGCAGCTGCCGGCTGCCGCGGATGGCCTAGTGGCAGA
GGGGCAAAAAGATACCGAGTGA back to topCoding sequence (CDS) from alignment at ch3:194697..195668- >KJC3_003012-T1 ID=KJC3_003012-T1|Name=KJC3_003012-T1|organism=Aspergillus niger KJC3|type=CDS|length=972bp|location=Sequence derived from alignment at ch3:194697..195668- (Aspergillus niger KJC3)
ATGGCTGATGTAAGAATGTCTGCCGATTTGAACCTCTACGGCCCCCTCTC
GGGACCCCCCTCCACCACTGAAGAGACCTGGCCCGGCGGGCTTCCTTTCT
ATCTCGACAATACCATTCCTCAGGACTGTCTTTCTCTTCCTCTGTTCGAC
GATAACAACTCATGGATGCTCAATTCCTTCGAGCCGCCGCCCGTGTCTTG
GGCGACTGGACCCGCTCTCCGAACCAACTCCACCGCTAGCTCCGAAGCCA
GCTTCATCGCGCCCTGCCAGACCGTACACAATCCTACCACTACCAGTGAT
TACGAGCAAAAATGCTCCCCGATGCAGAATACCATTCCGCAATTCGCACC
GGCACAGATGCCTCCAGCTCCTATGCATGAAATCACCTCGCGAGGTAGCA
TCACGAGCGTTAGCAGCGGTGGCAGTGCCGACAGCAACCAATCCCGGTTC
AGTATTTCCAGCTACAGCAGCAGTAACGAGAGCCCGACATATAGCCGTCG
AGGCAGCTCCAATCGGCCTCCCTCTCCGGGATTTGAAGTGAACGAGCGCG
AACGACGGAAACGGGAGCGCTTCCTCGAGCGCAACCGCGTGGCTGCCAAC
AAATGTCGCAAGAAGAAGAAGGAGCATGCCAAGCAGCTGGAGAGTCGCTG
CGAGACAGTTTCACGGGAGAATACGCTCCTGGAAAGCCAAGTGGATCACC
TGCGGGGCGAAATCTTGAACCTTAAGAATGAGCTGCTGCGACATTCCCAC
TGCGGGGATGAGAGGATTAAGTGCCATTTGGCGAAAATGGTGAAGCAGCT
TTCTGATAAAGCTGGCACGACAACTCAGAGTCCGGAGAAGAAGACAGAGT
CATTACCTCCGACGGAGAGTCCCAAGCAGGAGCAGGATATGGCAATGGAT
CTGGAAGATCTGGTGCAGCTGCCGGCTGCCGCGGATGGCCTAGTGGCAGA
GGGGCAAAAAGATACCGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0003700 | DNA-binding transcription factor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004827 |
| DBxref | InterPro:IPR002112 |
| DBxref | PFAM:PF07716 |
| DBxref | PFAM:PF00170 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:194697..195668 - |
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