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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:200589..202155+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003016-T1 ID=KJC3_003016-T1|Name=KJC3_003016-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1567bp|location=Sequence derived from alignment at ch3:200589..202155+ (Aspergillus niger KJC3)
CTCTACTTCTCACTTTCGTCCAACTGAGACATGACGCAAAGATGCCTTAC
TCCCGAGATTAAACCTGGATTCACCGTCATTAAACCCATCTGCACGCTAT
TATTAACACCCTATATTGGTCGCCTGGTGGCGGATCACGATGGGTCATCG
CCGCGATCTAGGTCAACTTCCAAGCCCCCTCTTATCCCGGAGAGGGAAGT
GGATGCGCGGGCTCGCAATGAGGGTTGCCTGTCCGTGAGGCATATGAGTG
TAACACTGGCATCCGCAGCGCCACTTGGTCATCTCAGGGTGTCGCCGTGA
TTGGACTGAAAGCTAGTCCTCGGCTACTCTCGAGATAGAGCTTCGAAAGA
TGGCACAATCCGAGACTTGGCCAATCATGCCGGCACGCCATGGCAGGACG
CTTACTCCACGATGAGAGATATTGGCATTCTGCTAAATATGGATGCCGGG
GGGTAAAGCAGGGAGATGAAGAAGTTATAAATATGGCCGCATCTATCCCC
GATCTCATGCAAATCCCAAGATCTTCCAGAACATCACACTCCCCTCTCTT
GAACTTGAATCGTACTTCTTTATCCCCTTGTACATGATGCATTCCGTTTC
CAAGGGCCTTCTCCTGGTGCTGAGCAGCCATCTGCTAGCTGCCACTGCCC
GTCCTGTGGCCACCGAGACTTCCACTGCCACGGCCACCGAGACTCCTGTG
AGCTACGGAGATTACGGCAACTATGGCAGCTATGGCAACTACCAAGCCTA
CAAGAGAGATGATGAGCCCAAGGCAGATGAGACTACCAGCAGCGTGTCGT
CCACTGCCTCTGCCACGTCCACCACTGCCGCGGGATATGGCAACTATGGC
AACTACGGAGACTACGGCACCTATGGTAGCTACCAAAATTACAAGCGGGG
GGATGAGCCCGATCCTAGCCTGAGCACCACCACCACCACTATCCCTACCA
CCACAGCCCCTGCCAGCTACGGCGACTACGGCAACTATGGCAACTACGGA
AACTATGGCAGCTACGAGGCCTACAAGCGTGGCGAAGAGCCAGACCCTAG
CTCTAGCACCTCTACTGCGGCTCCTACTACTACCGCCCCTGCCAGCTACG
GTGATTATGGGAACTATGGCAACTACGGCAACTATGGTAGTTACGAGGCC
TACAAGCGTGGCGAGGAGCCCGATCCTAGCTCCACCACTACCACTGCGGT
CCCTACGACCACTGCGCCGGCCAGCTACGGCGACTATGGCAACTACGGCA
ACTATGGAAACTACGGCAGCTACGAGGCGTACAAGCGTGACGAGGAGCCC
GAGGTGAGCAGCACTGCTTCTGCAACGACCTCGACCGAGTCCGCGACCAC
GACTGCGGCGAACTATGGCAACTATGGAAACTACGGCAACTATGGCAAGT
ACGCCAGCTACGGCTCGTACAAGAGGGATGCTGAGCCCCAACCCGACCAG
GATGTTGAGTCCTCGACCACCTCTGCTGCTAGCACGACTACTACTGCCGC
GGCGGGATATGGAAACTACGGTAACTACGGCAACTATGGCCAGTATGCTT
CTTACGGCAGTTATTAA back to topCoding sequence (CDS) from alignment at ch3:200589..202155+ >KJC3_003016-T1 ID=KJC3_003016-T1|Name=KJC3_003016-T1|organism=Aspergillus niger KJC3|type=CDS|length=984bp|location=Sequence derived from alignment at ch3:200589..202155+ (Aspergillus niger KJC3)
ATGATGCATTCCGTTTCCAAGGGCCTTCTCCTGGTGCTGAGCAGCCATCT
GCTAGCTGCCACTGCCCGTCCTGTGGCCACCGAGACTTCCACTGCCACGG
CCACCGAGACTCCTGTGAGCTACGGAGATTACGGCAACTATGGCAGCTAT
GGCAACTACCAAGCCTACAAGAGAGATGATGAGCCCAAGGCAGATGAGAC
TACCAGCAGCGTGTCGTCCACTGCCTCTGCCACGTCCACCACTGCCGCGG
GATATGGCAACTATGGCAACTACGGAGACTACGGCACCTATGGTAGCTAC
CAAAATTACAAGCGGGGGGATGAGCCCGATCCTAGCCTGAGCACCACCAC
CACCACTATCCCTACCACCACAGCCCCTGCCAGCTACGGCGACTACGGCA
ACTATGGCAACTACGGAAACTATGGCAGCTACGAGGCCTACAAGCGTGGC
GAAGAGCCAGACCCTAGCTCTAGCACCTCTACTGCGGCTCCTACTACTAC
CGCCCCTGCCAGCTACGGTGATTATGGGAACTATGGCAACTACGGCAACT
ATGGTAGTTACGAGGCCTACAAGCGTGGCGAGGAGCCCGATCCTAGCTCC
ACCACTACCACTGCGGTCCCTACGACCACTGCGCCGGCCAGCTACGGCGA
CTATGGCAACTACGGCAACTATGGAAACTACGGCAGCTACGAGGCGTACA
AGCGTGACGAGGAGCCCGAGGTGAGCAGCACTGCTTCTGCAACGACCTCG
ACCGAGTCCGCGACCACGACTGCGGCGAACTATGGCAACTATGGAAACTA
CGGCAACTATGGCAAGTACGCCAGCTACGGCTCGTACAAGAGGGATGCTG
AGCCCCAACCCGACCAGGATGTTGAGTCCTCGACCACCTCTGCTGCTAGC
ACGACTACTACTGCCGCGGCGGGATATGGAAACTACGGTAACTACGGCAA
CTATGGCCAGTATGCTTCTTACGGCAGTTATTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003016-T1.utr5p1 | KJC3_003016-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-22) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:200589..202155 + |
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