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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:212730..214676- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003021-T1 ID=KJC3_003021-T1|Name=KJC3_003021-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1947bp|location=Sequence derived from alignment at ch3:212730..214676- (Aspergillus niger KJC3) CTTTACCACACAGAACACTGGTTATCAGCTCCAATCTACTGACAATGGCT
CCAGCACCTGTCCTGGCCACCTCCGCCTACTACGCTCCCGGCGTGGTGTC
ATCCGCCTCCAAATATCTCCATGTCTCGGGCCAACCAGGCACCATTGAAG
GCACTGCCCCCGCCGACTACAATTCGCAGATCCATCTTGCCCTGGTGAAT
TTGCATCGTGTGCTAGCCGCCACCGGCGTTACACCCCGCGATGTAGTCAA
ACTCACCCTCTACATCGTCAACTATGACCCCAACAACCGCCTGCACACTC
GACCCCTGCAGACATGGCTAGCTGGCCACAAACCAGCCATTACTCTTGTT
CCGGTACCTCAACTAGCAGTTCCGGACTGGAAATTCGAAATCGAAGCCAC
CGTCGCGGTGCCTGACTCCATTCCAGCTTCGCTTTCTCTTCCTTCCCCCA
CAGAAACGACCGATGTTCTCGTCATTGGCGCCGGCCTGTCTGGCCTCATG
GCCGCCGAAACCATCCTCCAGTCCGGCCACTCGTGCATCGTGCTCGAAGG
CCGCGACCGCGTGGGCGGCAAGACGTGGACTTGTCCTCTGCCGAGTGGCA
CAGGAGTGGTTGATCTCGGCGCCGCCTGGATCAACGATACCAACCAGAGC
ATGATGTATGAGTTGGCGCGACGGGCAGGGGCCGATTTGATCGAGCAGAA
CACCACGGGCAACTGTCTTTTGCAGCGGGAGGACGGTGCCATTACTGCTT
TTCCTTACGGGCAGACTCCATGCGTATGCTACCTTCCTTTCTACCTTATT
ACACACATACTGACTGCAACTAGATAACCCCCCAGATTGTCAAAGAAATA
GAAGCCATCCGCGACACCGCCGAACAAGACTGCCAATCCCTTTCTACCAG
TCGTCCCCAGAGTCCCGATCTCGACTCTCTCTCCTTCCTCGCCTATCTGC
ATTCCCGCAACGCCAGCCCCATCGCCGTTGCCAACGCCTCCGTCTGGACT
CGCGCCATGCTCGGCCAGGAGCCCCAGGACATCTCCGCCCTCTACTTTCT
CAATTACTGCAAGTCCGGCGGCGGATTACTCCAGATGCGCTCGGATCGGA
AACACGGCGCGCAGTATCTGCGTGTGCGACAGGGGACGCAGATATTTGCG
AAGACTTTGGCGGAGACTTTGCCTACGGATACAATTCGGTTCGGTCAGAG
AGTGGTAGGGATAACGCAGGTGCAGAAAGGGGTGAATTACGTGCAGACGG
AGAAGGGATTGGTGGTCAAGGCTCGGAAGGTGATTTGTTCTGTGCCGACA
CCTGTCCTCAAGACCATCAAGTTCGAGCCGCAACTACCTGCTGCCAAGCA
GCTGCTGGTCGATTCTTTCAGATATGGCTACTACACTAAGGTGATGTTGT
CGTTCCGTACAGCGTGGTGGGCGGACCGTGGGTTCTGTGGACTGGCGCAG
TCGTTTGTTGGTCCTGCATCGATTTATCGCGATACGAGTAGCCCAGAGGA
TGGGAAGTGGGTGCTAACGGCGTTTTTGGCGGGTGATGCTGGGAGGAACT
GGTCTGCGTTGGGGAGTCAAAGGGAGCGTGAATTGGCGTTGTTGGAGCAG
TTGGGGGCTATCTATGGCGATAAGGATCTGCCTAAGAGGGATTTTGTCGA
GGCTCTCGGTCATGAGTGGTCTACTGAGGAGCTTTCTGGCTGGGGCTGTC
CTTGTCCGGCACTGCCGCCGGGCGTATTGACGCTGGCTGGTGATGCCCTT
CGAGAACCCTTCCGGGATGTGCATTTCGTGGGGACAGAGACGGCAGAGGA
GTGGAAGGGTTATATGGAGGGTGCAGTGCGCAGTGGGAAGAGGGGGGCGG
TGGAGGCTGTTAAGGGGCTGACGAGGAGTCAATTGTGATATCTATAGAGT
AGGTATAGTAATAGCTATCTTCTAGAGAATTTAACTGTGAATGGGCA back to topCoding sequence (CDS) from alignment at ch3:212730..214676- >KJC3_003021-T1 ID=KJC3_003021-T1|Name=KJC3_003021-T1|organism=Aspergillus niger KJC3|type=CDS|length=3588bp|location=Sequence derived from alignment at ch3:212730..214676- (Aspergillus niger KJC3) ATAACCCCCCAGATTGTCAAAGAAATAGAAGCCATCCGCGACACCGCCGA ACAAGACTGCCAATCCCTTTCTACCAGTCGTCCCCAGAGTCCCGATCTCG ACTCTCTCTCCTTCCTCGCCTATCTGCATTCCCGCAACGCCAGCCCCATC GCCGTTGCCAACGCCTCCGTCTGGACTCGCGCCATGCTCGGCCAGGAGCC CCAGGACATCTCCGCCCTCTACTTTCTCAATTACTGCAAGTCCGGCGGCG GATTACTCCAGATGCGCTCGGATCGGAAACACGGCGCGCAGTATCTGCGT GTGCGACAGGGGACGCAGATATTTGCGAAGACTTTGGCGGAGACTTTGCC TACGGATACAATTCGGTTCGGTCAGAGAGTGGTAGGGATAACGCAGGTGC AGAAAGGGGTGAATTACGTGCAGACGGAGAAGGGATTGGTGGTCAAGGCT CGGAAGGTGATTTGTTCTGTGCCGACACCTGTCCTCAAGACCATCAAGTT CGAGCCGCAACTACCTGCTGCCAAGCAGCTGCTGGTCGATTCTTTCAGAT ATGGCTACTACACTAAGGTGATGTTGTCGTTCCGTACAGCGTGGTGGGCG GACCGTGGGTTCTGTGGACTGGCGCAGTCGTTTGTTGGTCCTGCATCGAT TTATCGCGATACGAGTAGCCCAGAGGATGGGAAGTGGGTGCTAACGGCGT TTTTGGCGGGTGATGCTGGGAGGAACTGGTCTGCGTTGGGGAGTCAAAGG GAGCGTGAATTGGCGTTGTTGGAGCAGTTGGGGGCTATCTATGGCGATAA GGATCTGCCTAAGAGGGATTTTGTCGAGGCTCTCGGTCATGAGTGGTCTA CTGAGGAGCTTTCTGGCTGGGGCTGTCCTTGTCCGGCACTGCCGCCGGGC GTATTGACGCTGGCTGGTGATGCCCTTCGAGAACCCTTCCGGGATGTGCA TTTCGTGGGGACAGAGACGGCAGAGGAGTGGAAGGGTTATATGGAGGGTG CAGTGCGCAGTGGGAAGAGGGGGGCGGTGGAGGCTGTTAAGGGGCTGACG AGGAGTCAATTGTGAATGGCTCCAGCACCTGTCCTGGCCACCTCCGCCTA CTACGCTCCCGGCGTGGTGTCATCCGCCTCCAAATATCTCCATGTCTCGG GCCAACCAGGCACCATTGAAGGCACTGCCCCCGCCGACTACAATTCGCAG ATCCATCTTGCCCTGGTGAATTTGCATCGTGTGCTAGCCGCCACCGGCGT TACACCCCGCGATGTAGTCAAACTCACCCTCTACATCGTCAACTATGACC CCAACAACCGCCTGCACACTCGACCCCTGCAGACATGGCTAGCTGGCCAC AAACCAGCCATTACTCTTGTTCCGGTACCTCAACTAGCAGTTCCGGACTG GAAATTCGAAATCGAAGCCACCGTCGCGGTGCCTGACTCCATTCCAGCTT CGCTTTCTCTTCCTTCCCCCACAGAAACGACCGATGTTCTCGTCATTGGC GCCGGCCTGTCTGGCCTCATGGCCGCCGAAACCATCCTCCAGTCCGGCCA CTCGTGCATCGTGCTCGAAGGCCGCGACCGCGTGGGCGGCAAGACGTGGA CTTGTCCTCTGCCGAGTGGCACAGGAGTGGTTGATCTCGGCGCCGCCTGG ATCAACGATACCAACCAGAGCATGATGTATGAGTTGGCGCGACGGGCAGG GGCCGATTTGATCGAGCAGAACACCACGGGCAACTGTCTTTTGCAGCGGG AGGACGGTGCCATTACTGCTTTTCCTTACGGGCAGACTCCATGCATAACC CCCCAGATTGTCAAAGAAATAGAAGCCATCCGCGACACCGCCGAACAAGA CTGCCAATCCCTTTCTACCAGTCGTCCCCAGAGTCCCGATCTCGACTCTC TCTCCTTCCTCGCCTATCTGCATTCCCGCAACGCCAGCCCCATCGCCGTT GCCAACGCCTCCGTCTGGACTCGCGCCATGCTCGGCCAGGAGCCCCAGGA CATCTCCGCCCTCTACTTTCTCAATTACTGCAAGTCCGGCGGCGGATTAC TCCAGATGCGCTCGGATCGGAAACACGGCGCGCAGTATCTGCGTGTGCGA CAGGGGACGCAGATATTTGCGAAGACTTTGGCGGAGACTTTGCCTACGGA TACAATTCGGTTCGGTCAGAGAGTGGTAGGGATAACGCAGGTGCAGAAAG GGGTGAATTACGTGCAGACGGAGAAGGGATTGGTGGTCAAGGCTCGGAAG GTGATTTGTTCTGTGCCGACACCTGTCCTCAAGACCATCAAGTTCGAGCC GCAACTACCTGCTGCCAAGCAGCTGCTGGTCGATTCTTTCAGATATGGCT ACTACACTAAGGTGATGTTGTCGTTCCGTACAGCGTGGTGGGCGGACCGT GGGTTCTGTGGACTGGCGCAGTCGTTTGTTGGTCCTGCATCGATTTATCG CGATACGAGTAGCCCAGAGGATGGGAAGTGGGTGCTAACGGCGTTTTTGG CGGGTGATGCTGGGAGGAACTGGTCTGCGTTGGGGAGTCAAAGGGAGCGT GAATTGGCGTTGTTGGAGCAGTTGGGGGCTATCTATGGCGATAAGGATCT GCCTAAGAGGGATTTTGTCGAGGCTCTCGGTCATGAGTGGTCTACTGAGG AGCTTTCTGGCTGGGGCTGTCCTTGTCCGGCACTGCCGCCGGGCGTATTG ACGCTGGCTGGTGATGCCCTTCGAGAACCCTTCCGGGATGTGCATTTCGT GGGGACAGAGACGGCAGAGGAGTGGAAGGGTTATATGGAGGGTGCAGTGC GCAGTGGGAAGAGGGGGGCGGTGGAGGCTGTTAAGGGGCTGACGAGGAGT CAATTGTGAATGGCTCCAGCACCTGTCCTGGCCACCTCCGCCTACTACGC TCCCGGCGTGGTGTCATCCGCCTCCAAATATCTCCATGTCTCGGGCCAAC CAGGCACCATTGAAGGCACTGCCCCCGCCGACTACAATTCGCAGATCCAT CTTGCCCTGGTGAATTTGCATCGTGTGCTAGCCGCCACCGGCGTTACACC CCGCGATGTAGTCAAACTCACCCTCTACATCGTCAACTATGACCCCAACA ACCGCCTGCACACTCGACCCCTGCAGACATGGCTAGCTGGCCACAAACCA GCCATTACTCTTGTTCCGGTACCTCAACTAGCAGTTCCGGACTGGAAATT CGAAATCGAAGCCACCGTCGCGGTGCCTGACTCCATTCCAGCTTCGCTTT CTCTTCCTTCCCCCACAGAAACGACCGATGTTCTCGTCATTGGCGCCGGC CTGTCTGGCCTCATGGCCGCCGAAACCATCCTCCAGTCCGGCCACTCGTG CATCGTGCTCGAAGGCCGCGACCGCGTGGGCGGCAAGACGTGGACTTGTC CTCTGCCGAGTGGCACAGGAGTGGTTGATCTCGGCGCCGCCTGGATCAAC GATACCAACCAGAGCATGATGTATGAGTTGGCGCGACGGGCAGGGGCCGA TTTGATCGAGCAGAACACCACGGGCAACTGTCTTTTGCAGCGGGAGGACG GTGCCATTACTGCTTTTCCTTACGGGCAGACTCCATGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
Term | Definition |
GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_003021-T1.utr3p1 | KJC3_003021-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_003021-T1.utr5p1 | KJC3_003021-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | antiSMASH:Cluster_3.3 |
DBxref | InterPro:IPR006175 |
DBxref | InterPro:IPR035959 |
DBxref | InterPro:IPR036188 |
DBxref | InterPro:IPR002937 |
DBxref | InterPro:IPR001613 |
DBxref | PFAM:PF01042 |
DBxref | PFAM:PF13450 |
DBxref | PFAM:PF01593 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch3 | supercontig | ch3:212730..214676 - |
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