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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:222282..223679+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003026-T1 ID=KJC3_003026-T1|Name=KJC3_003026-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1398bp|location=Sequence derived from alignment at ch3:222282..223679+ (Aspergillus niger KJC3)
CATCATCCCTCCAACCAGGCAGGTTAACTCCATTGCCATTTACCTCTCAC
CATTTATAACATCCCTATCGATATCCCGATAACAACAGGTTGGCCCTCCC
CCCTCATCCACATCTACACCCCCTCCCCTGCTCACCATGCAAGACAAAGC
CAACATCCTGCTAATTGGCTGTGGTGGCATCGGCACTATCGCTGCGCTGA
ACCTGGAACTTGGAGGCAAAGCTATTGTCACTGCTGTTCTGCGTTCAAAT
TACGAGCATGTCAAAGCTCACGGCTTCTCCATCAGGTCGATCGATCACGG
CGAAGTGAAGGGCTTCCGACCGTCAATCCGTATGCAGCCAACTTTTACAT
CAGCAGATTCCCACTGACAGTCGCCTTGACAGTACGAAATACCATCCCAG
ACGTTGAGAAAGAAAATCTCCCCCCGTACAGTTACATCGTCGTCACCACC
AAGAACTACGCCGATGTGCCCCCGACCGTAGCAGAGATCATCCGCCCCGC
CGTCACCCGGGGCTACACACGCATCGCTCTCGTCCAGAATGGCCTGAACA
TAGAAAAGCCCCTCATTGCGGCCTTCCCAGAAAATATCATCCTCTCGGGC
GTCAGCTTCTGTGGCTCCCATCAGGTCTCCATAGGAGAGATCGTCCACGA
AGACGATGACGAACTCTACGTGGGAGCCTTCCGCAATCCAAACCTGAATC
CCGACGAAGAGGACGCAGCCGCCAAAGAATACTGTGAGATCTATGGGGCA
GGTGGCAAGTGCAATCCTCAGTTTAACCCCAACGTCGGCTTCAGTCGCTG
GCGGAAGCTGCTGTACAATGCCTGCTTGAACACCATCTGTGCCGTCACGG
ATCTCGACACCGGTCGGATTCAGCTGGCAGACGGCGCCATTGAAAATCTG
GTCCGACCGGCCATGGAGGAGATTCGCGCTGGTGCCAAGGCATGTGGACA
TGAGTTGCCACCCGAGCTGGTGGACTTTATGATCACGATGGATCCCATTA
CCATGTACAATCCACCCAGCATGCAGGTGGACATACGCAATGGCCGGTTC
TGTGAGTATGAGAACATTGTGGGAGAGGCATTAAAGGAAGGCAAAGCCAG
AGGGGTCCCAATGCCGACATTAACGGTATTGTATGGCCTTCTCAAGGCCA
TCCAGTGGCGGACCAAGGAGAGGAAAGGGCTGGTGGAGATTCCAGAGCCG
GAGGACCACACCATCAAGAAGTGATATAGTAATGAATGATAGAAACCAAA
TTAGTCCCTTTATGCTAGCATAGCTGGCCTCTGCCTGAAATGACATAAGC
AGGAGTTTGGGCTGAGATGGCATAATGCGACGATAATGTTGTGAGAACGT
TACTAAGAGTGCCCCAAATCGCTAGTCGGAGAGCTGTATCTATAGTCT back to topCoding sequence (CDS) from alignment at ch3:222282..223679+ >KJC3_003026-T1 ID=KJC3_003026-T1|Name=KJC3_003026-T1|organism=Aspergillus niger KJC3|type=CDS|length=2070bp|location=Sequence derived from alignment at ch3:222282..223679+ (Aspergillus niger KJC3)
ATGCAAGACAAAGCCAACATCCTGCTAATTGGCTGTGGTGGCATCGGCAC
TATCGCTGCGCTGAACCTGGAACTTGGAGGCAAAGCTATTGTCACTGCTG
TTCTGCGTTCAAATTACGAGCATGTCAAAGCTCACGGCTTCTCCATCAGG
TCGATCGATCACGGCGAAGTGAAGGGCTTCCGACCGTCAATCCTACGAAA
TACCATCCCAGACGTTGAGAAAGAAAATCTCCCCCCGTACAGTTACATCG
TCGTCACCACCAAGAACTACGCCGATGTGCCCCCGACCGTAGCAGAGATC
ATCCGCCCCGCCGTCACCCGGGGCTACACACGCATCGCTCTCGTCCAGAA
TGGCCTGAACATAGAAAAGCCCCTCATTGCGGCCTTCCCAGAAAATATCA
TCCTCTCGGGCGTCAGCTTCTGTGGCTCCCATCAGGTCTCCATAGGAGAG
ATCGTCCACGAAGACGATGACGAACTCTACGTGGGAGCCTTCCGCAATCC
AAACCTGAATCCCGACGAAGAGGACGCAGCCGCCAAAGAATACTGTGAGA
TCTATGGGGCAGGTGGCAAGTGCAATCCTCAGTTTAACCCCAACGTCGGC
TTCAGTCGCTGGCGGAAGCTGCTGTACAATGCCTGCTTGAACACCATCTG
TGCCGTCACGGATCTCGACACCGGTCGGATTCAGCTGGCAGACGGCGCCA
TTGAAAATCTGGTCCGACCGGCCATGGAGGAGATTCGCGCTGGTGCCAAG
GCATGTGGACATGAGTTGCCACCCGAGCTGGTGGACTTTATGATCACGAT
GGATCCCATTACCATGTACAATCCACCCAGCATGCAGGTGGACATACGCA
ATGGCCGGTTCTGTGAGTATGAGAACATTGTGGGAGAGGCATTAAAGGAA
GGCAAAGCCAGAGGGGTCCCAATGCCGACATTAACGGTATTGTATGGCCT
TCTCAAGGCCATCCAGTGGCGGACCAAGGAGAGGAAAGGGCTGGTGGAGA
TTCCAGAGCCGGAGGACCACACCATCAAGAAGTGAATGCAAGACAAAGCC
AACATCCTGCTAATTGGCTGTGGTGGCATCGGCACTATCGCTGCGCTGAA
CCTGGAACTTGGAGGCAAAGCTATTGTCACTGCTGTTCTGCGTTCAAATT
ACGAGCATGTCAAAGCTCACGGCTTCTCCATCAGGTCGATCGATCACGGC
GAAGTGAAGGGCTTCCGACCGTCAATCCTACGAAATACCATCCCAGACGT
TGAGAAAGAAAATCTCCCCCCGTACAGTTACATCGTCGTCACCACCAAGA
ACTACGCCGATGTGCCCCCGACCGTAGCAGAGATCATCCGCCCCGCCGTC
ACCCGGGGCTACACACGCATCGCTCTCGTCCAGAATGGCCTGAACATAGA
AAAGCCCCTCATTGCGGCCTTCCCAGAAAATATCATCCTCTCGGGCGTCA
GCTTCTGTGGCTCCCATCAGGTCTCCATAGGAGAGATCGTCCACGAAGAC
GATGACGAACTCTACGTGGGAGCCTTCCGCAATCCAAACCTGAATCCCGA
CGAAGAGGACGCAGCCGCCAAAGAATACTGTGAGATCTATGGGGCAGGTG
GCAAGTGCAATCCTCAGTTTAACCCCAACGTCGGCTTCAGTCGCTGGCGG
AAGCTGCTGTACAATGCCTGCTTGAACACCATCTGTGCCGTCACGGATCT
CGACACCGGTCGGATTCAGCTGGCAGACGGCGCCATTGAAAATCTGGTCC
GACCGGCCATGGAGGAGATTCGCGCTGGTGCCAAGGCATGTGGACATGAG
TTGCCACCCGAGCTGGTGGACTTTATGATCACGATGGATCCCATTACCAT
GTACAATCCACCCAGCATGCAGGTGGACATACGCAATGGCCGGTTCTGTG
AGTATGAGAACATTGTGGGAGAGGCATTAAAGGAAGGCAAAGCCAGAGGG
GTCCCAATGCCGACATTAACGGTATTGTATGGCCTTCTCAAGGCCATCCA
GTGGCGGACCAAGGAGAGGAAAGGGCTGGTGGAGATTCCAGAGCCGGAGG
ACCACACCATCAAGAAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008677 | 2-dehydropantoate 2-reductase activity |
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015940 | pantothenate biosynthetic process |
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003026-T1.utr5p1 | KJC3_003026-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003026-T1.utr3p1 | KJC3_003026-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.3 |
| DBxref | InterPro:IPR008927 |
| DBxref | InterPro:IPR003710 |
| DBxref | InterPro:IPR013752 |
| DBxref | InterPro:IPR013328 |
| DBxref | InterPro:IPR013332 |
| DBxref | PFAM:PF08546 |
| DBxref | PFAM:PF02558 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:222282..223679 + |
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