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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:237077..239000- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003034-T1 ID=KJC3_003034-T1|Name=KJC3_003034-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1924bp|location=Sequence derived from alignment at ch3:237077..239000- (Aspergillus niger KJC3)
ATGTATCCAACCCCAGTAACGGACTTCATCCACGACACCTTCGACTTCAT
CATCGTCGGCGGAGGCACCGCAGGCCTTGTCCTCGCTGCCCGTCTATCCG
AGGATCCCAACGTTCGCGTCGGGGTCATCGAAGCCGGGCTCTCGCGACTA
AATGATCTGAAGGTGGACACACCTACCGGAATGGCCATGATCCTGAAAGA
TCCAGAGTACGACTGGTGCTTCCAGACTTCACCACAGGTATGTCCTATCC
ACTATCAGACATCAGATGGTATCTAAGCTCACAATCAGCCAATTGTAGAG
CGGCGTAAACAACAAAACCTACGCCACCCATCGCGGCAAAATGCTCGGCG
GCTCCAGCGGCTTCAACTTTATGATGTCCGGGCGACCCACGGAAGAAGAG
ATAAATGACTGGGGCAAGGCCACAGGAGTAAAAGGGTGGGAGTGGTCTGA
TATACTGCCGTATTTCAAGAAACATGAAAGGTTAGAGGTGGATCAGCTGA
ATATTATGTCCCGAGATACAATTATCTGTCCGCTAGAACCTGGTCTACAT
GGGACTGATGGACCGATTCACCATTCGTTTGGGACTTGGCACGCGCCGTT
TGAGAAGGATCTTATACCTGCTCTTGACACTGTCTCGGGATTGTCGCGAC
CAGAGAATCCATATGCCGGAAACCACCTGGGGTTCTATCGCACGCTGTTC
ACGATCGATCGCACCGGCAAACCAGTACGCAGCTACGCTGCGAGCGGATA
CCTAGCTCCGAACGCCGGTCGTTCGAATTTACGGGTCCTGACAGACGCGC
TCGTATGCAAGGTCACGCTCGGGACGAACGAGCACAGCGAACGTCAGGCG
ACGGGCGTGGAATTCCTGCATCAGGGGACGTCGTATACCGTGCGTCCACG
CAAGGAAGTCATCCTCAGCGCAGGCACAGTACAGAGTCCACAGCTCCTAG
AGTTATCCGGGATAGGCGACCCGAATGTCCTAGGCCGGATCGGCATCCCC
TGCATCGTTCCGAACATGGACGTGGGAAATAATCTCCAAGAGCAGGCGCT
GTGCTCCGTCGTGTATGAACTAGCACCGGGGTATACGTCCGTCGACTCGC
TACTCCGTGATCATGCTATCTTCGCGGAACACCAGAAACTATATGAAGAG
GAACACACCGGTGCATTGTCCGGACCGTTGAGTATAACAGGCTACACTTC
CTACGCGACACAGATTGAGGAACAGGACCTCGATAAAACAGTCGCCTGTT
TCCTCGATCCCAAGAACGCGTCCACGAAACAGGACACTGTCCTCCAGAAT
AAACAACGGAAGATCATCGCAGCACGTATCCAGGACCCTACCTGTCCCTG
TATTCAGTACATGTGCGCGCCCGAGAACTCCGATACGGCCCGCGCGGTTG
ATAACCTCGGCGCAGTCATGCCCGGTCCGCCGTCTGGGTTTAATGACTGC
TACTCTATCACGACGAGCCAGATGCATCCTGTGTCTCGGGGACGGGTGCA
CGTTGTATCGGATGATCCGAAGCAAGCTCCAGATATTAGTCCGGGGCTGT
TGGCTCATCCGGCTGATGTGGATGTGCTTGCTGCGGGGGTCAAGTTTGCT
GATAGGGTGTTTCGGTCGGAGTTGATTGGGGATAAAGTTGCGAGGAGGGT
GAGACCGGATCCGGGGGTGGATGTTGGTGTTAGGGATCAAGCGAAGGAGT
TTGTGAGGGAGAATGCGGTTCCATTTCAGCATTTGGTTGGAACGTGTGCT
TTGGGGATGGTGGTGGATGAGAGGTTGAGGGTGAAGAGGGTCAAGGGGTT
GAGGGTTGTTGATGCGAGTGTTGTGCCTATGATGGTGAGTCCGTCGTTGG
CGGCAGTGGTGTATGCTGTTGCTGAGAAGGCGGCGGATTTGGTGAAGGAA
GATTGGGGTTTGGTTAATGGGTAG back to topCoding sequence (CDS) from alignment at ch3:237077..239000- >KJC3_003034-T1 ID=KJC3_003034-T1|Name=KJC3_003034-T1|organism=Aspergillus niger KJC3|type=CDS|length=3726bp|location=Sequence derived from alignment at ch3:237077..239000- (Aspergillus niger KJC3)
AGCGGCGTAAACAACAAAACCTACGCCACCCATCGCGGCAAAATGCTCGG
CGGCTCCAGCGGCTTCAACTTTATGATGTCCGGGCGACCCACGGAAGAAG
AGATAAATGACTGGGGCAAGGCCACAGGAGTAAAAGGGTGGGAGTGGTCT
GATATACTGCCGTATTTCAAGAAACATGAAAGGTTAGAGGTGGATCAGCT
GAATATTATGTCCCGAGATACAATTATCTGTCCGCTAGAACCTGGTCTAC
ATGGGACTGATGGACCGATTCACCATTCGTTTGGGACTTGGCACGCGCCG
TTTGAGAAGGATCTTATACCTGCTCTTGACACTGTCTCGGGATTGTCGCG
ACCAGAGAATCCATATGCCGGAAACCACCTGGGGTTCTATCGCACGCTGT
TCACGATCGATCGCACCGGCAAACCAGTACGCAGCTACGCTGCGAGCGGA
TACCTAGCTCCGAACGCCGGTCGTTCGAATTTACGGGTCCTGACAGACGC
GCTCGTATGCAAGGTCACGCTCGGGACGAACGAGCACAGCGAACGTCAGG
CGACGGGCGTGGAATTCCTGCATCAGGGGACGTCGTATACCGTGCGTCCA
CGCAAGGAAGTCATCCTCAGCGCAGGCACAGTACAGAGTCCACAGCTCCT
AGAGTTATCCGGGATAGGCGACCCGAATGTCCTAGGCCGGATCGGCATCC
CCTGCATCGTTCCGAACATGGACGTGGGAAATAATCTCCAAGAGCAGGCG
CTGTGCTCCGTCGTGTATGAACTAGCACCGGGGTATACGTCCGTCGACTC
GCTACTCCGTGATCATGCTATCTTCGCGGAACACCAGAAACTATATGAAG
AGGAACACACCGGTGCATTGTCCGGACCGTTGAGTATAACAGGCTACACT
TCCTACGCGACACAGATTGAGGAACAGGACCTCGATAAAACAGTCGCCTG
TTTCCTCGATCCCAAGAACGCGTCCACGAAACAGGACACTGTCCTCCAGA
ATAAACAACGGAAGATCATCGCAGCACGTATCCAGGACCCTACCTGTCCC
TGTATTCAGTACATGTGCGCGCCCGAGAACTCCGATACGGCCCGCGCGGT
TGATAACCTCGGCGCAGTCATGCCCGGTCCGCCGTCTGGGTTTAATGACT
GCTACTCTATCACGACGAGCCAGATGCATCCTGTGTCTCGGGGACGGGTG
CACGTTGTATCGGATGATCCGAAGCAAGCTCCAGATATTAGTCCGGGGCT
GTTGGCTCATCCGGCTGATGTGGATGTGCTTGCTGCGGGGGTCAAGTTTG
CTGATAGGGTGTTTCGGTCGGAGTTGATTGGGGATAAAGTTGCGAGGAGG
GTGAGACCGGATCCGGGGGTGGATGTTGGTGTTAGGGATCAAGCGAAGGA
GTTTGTGAGGGAGAATGCGGTTCCATTTCAGCATTTGGTTGGAACGTGTG
CTTTGGGGATGGTGGTGGATGAGAGGTTGAGGGTGAAGAGGGTCAAGGGG
TTGAGGGTTGTTGATGCGAGTGTTGTGCCTATGATGGTGAGTCCGTCGTT
GGCGGCAGTGGTGTATGCTGTTGCTGAGAAGGCGGCGGATTTGGTGAAGG
AAGATTGGGGTTTGGTTAATGGGTAGATGTATCCAACCCCAGTAACGGAC
TTCATCCACGACACCTTCGACTTCATCATCGTCGGCGGAGGCACCGCAGG
CCTTGTCCTCGCTGCCCGTCTATCCGAGGATCCCAACGTTCGCGTCGGGG
TCATCGAAGCCGGGCTCTCGCGACTAAATGATCTGAAGGTGGACACACCT
ACCGGAATGGCCATGATCCTGAAAGATCCAGAGTACGACTGGTGCTTCCA
GACTTCACCACAGAGCGGCGTAAACAACAAAACCTACGCCACCCATCGCG
GCAAAATGCTCGGCGGCTCCAGCGGCTTCAACTTTATGATGTCCGGGCGA
CCCACGGAAGAAGAGATAAATGACTGGGGCAAGGCCACAGGAGTAAAAGG
GTGGGAGTGGTCTGATATACTGCCGTATTTCAAGAAACATGAAAGGTTAG
AGGTGGATCAGCTGAATATTATGTCCCGAGATACAATTATCTGTCCGCTA
GAACCTGGTCTACATGGGACTGATGGACCGATTCACCATTCGTTTGGGAC
TTGGCACGCGCCGTTTGAGAAGGATCTTATACCTGCTCTTGACACTGTCT
CGGGATTGTCGCGACCAGAGAATCCATATGCCGGAAACCACCTGGGGTTC
TATCGCACGCTGTTCACGATCGATCGCACCGGCAAACCAGTACGCAGCTA
CGCTGCGAGCGGATACCTAGCTCCGAACGCCGGTCGTTCGAATTTACGGG
TCCTGACAGACGCGCTCGTATGCAAGGTCACGCTCGGGACGAACGAGCAC
AGCGAACGTCAGGCGACGGGCGTGGAATTCCTGCATCAGGGGACGTCGTA
TACCGTGCGTCCACGCAAGGAAGTCATCCTCAGCGCAGGCACAGTACAGA
GTCCACAGCTCCTAGAGTTATCCGGGATAGGCGACCCGAATGTCCTAGGC
CGGATCGGCATCCCCTGCATCGTTCCGAACATGGACGTGGGAAATAATCT
CCAAGAGCAGGCGCTGTGCTCCGTCGTGTATGAACTAGCACCGGGGTATA
CGTCCGTCGACTCGCTACTCCGTGATCATGCTATCTTCGCGGAACACCAG
AAACTATATGAAGAGGAACACACCGGTGCATTGTCCGGACCGTTGAGTAT
AACAGGCTACACTTCCTACGCGACACAGATTGAGGAACAGGACCTCGATA
AAACAGTCGCCTGTTTCCTCGATCCCAAGAACGCGTCCACGAAACAGGAC
ACTGTCCTCCAGAATAAACAACGGAAGATCATCGCAGCACGTATCCAGGA
CCCTACCTGTCCCTGTATTCAGTACATGTGCGCGCCCGAGAACTCCGATA
CGGCCCGCGCGGTTGATAACCTCGGCGCAGTCATGCCCGGTCCGCCGTCT
GGGTTTAATGACTGCTACTCTATCACGACGAGCCAGATGCATCCTGTGTC
TCGGGGACGGGTGCACGTTGTATCGGATGATCCGAAGCAAGCTCCAGATA
TTAGTCCGGGGCTGTTGGCTCATCCGGCTGATGTGGATGTGCTTGCTGCG
GGGGTCAAGTTTGCTGATAGGGTGTTTCGGTCGGAGTTGATTGGGGATAA
AGTTGCGAGGAGGGTGAGACCGGATCCGGGGGTGGATGTTGGTGTTAGGG
ATCAAGCGAAGGAGTTTGTGAGGGAGAATGCGGTTCCATTTCAGCATTTG
GTTGGAACGTGTGCTTTGGGGATGGTGGTGGATGAGAGGTTGAGGGTGAA
GAGGGTCAAGGGGTTGAGGGTTGTTGATGCGAGTGTTGTGCCTATGATGG
TGAGTCCGTCGTTGGCGGCAGTGGTGTATGCTGTTGCTGAGAAGGCGGCG
GATTTGGTGAAGGAAGATTGGGGTTTGGTTAATGGGTAGATGTATCCAAC
CCCAGTAACGGACTTCATCCACGACACCTTCGACTTCATCATCGTCGGCG
GAGGCACCGCAGGCCTTGTCCTCGCTGCCCGTCTATCCGAGGATCCCAAC
GTTCGCGTCGGGGTCATCGAAGCCGGGCTCTCGCGACTAAATGATCTGAA
GGTGGACACACCTACCGGAATGGCCATGATCCTGAAAGATCCAGAGTACG
ACTGGTGCTTCCAGACTTCACCACAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.3 |
| Note | CAZy:AA3_3 |
| Note | CAZy:AA3 |
| Note | CAZy:AA3_2 |
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR000172 |
| DBxref | InterPro:IPR012132 |
| DBxref | InterPro:IPR007867 |
| DBxref | PFAM:PF00732 |
| DBxref | PFAM:PF05199 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:237077..239000 - |
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