You are here

KJC3_003039-T1, KJC3_003039-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003039-T1
Unique NameKJC3_003039-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:249998..250791+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003039-T1 ID=KJC3_003039-T1|Name=KJC3_003039-T1|organism=Aspergillus niger KJC3|type=mRNA|length=794bp|location=Sequence derived from alignment at ch3:249998..250791+ (Aspergillus niger KJC3)
ATGTGGCAGCGTTCTCTGTGTGAGGCCATCCACAGACAGCAGTTCGAAGC TTACGCTTCCTCTGGGGTGAACCGACAGAGCCGTAACAGCAAGCAAGTAC ACCCAACGCAAAGCCATGGTACGTTTGGTACCTTACACAGGGCTTCTGAA ACCTCTTTTCCCTTCCTTATTATAGTTATACATTTATAGCCTAGGCGCGC TCACCAGTCATAATCACTCAGACAGGACCCAAGAGCATAGAAATTCGTTG CATCAGGCCAGAAGATGAAGACACCGTCTATCTAAAGGCTGCTTTCTCTG AGCAATTGGACGTCAATATTCTCACGCAGAGGGGTCTCCAAAGGCTGGAA GGAATTCTGCTGCAGCGCAATGAGATACCCAAAACGTTCTACGATTCCGA TAGCGTTTCATACACAGTGCGCGATGTAGTCCGCCTAAGTATTGGGAAGA AAAGCGAAACCAAACTGTGGAGACAAGATTTCTACGTTTCCCTGAACGAC GATGAAGCGCGCTTGGATACCCAGTATGATGCGATTCTAGGGACTCAGTG CAGTGTCGGACGGTTCACGGATAAGAATGCCCTTCCAGTTGCTGTTACCC AGCTCGCATCGCAGAGTGCAAGTGAGTCTGTCTTGTTTTCTGTTTAGCCA ACGAAGAAGTGATGCAAACTGAACACTGTTCTAGATGATAAGGCGGCCCA GGAGAAAAAGAAGCGGGAGAAAGAGGAAGCTTTGGCGAAGAAGAACCAGC AGTTGCGTGAACAGCAGAAAAAGCAGGCTTCTCAGGGTAAATAA
back to top

Coding sequence (CDS) from alignment at ch3:249998..250791+

>KJC3_003039-T1 ID=KJC3_003039-T1|Name=KJC3_003039-T1|organism=Aspergillus niger KJC3|type=CDS|length=1872bp|location=Sequence derived from alignment at ch3:249998..250791+ (Aspergillus niger KJC3)
ATGTGGCAGCGTTCTCTGTGTGAGGCCATCCACAGACAGCAGTTCGAAGC
TTACGCTTCCTCTGGGGTGAACCGACAGAGCCGTAACAGCAAGCAAGTAC
ACCCAACGCAAAGCCATGGACCCAAGAGCATAGAAATTCGTTGCATCAGG
CCAGAAGATGAAGACACCGTCTATCTAAAGGCTGCTTTCTCTGAGCAATT
GGACGTCAATATTCTCACGCAGAGGGGTCTCCAAAGGCTGGAAGGAATTC
TGCTGCAGCGCAATGAGATACCCAAAACGTTCTACGATTCCGATAGCGTT
TCATACACAGTGCGCGATGTAGTCCGCCTAAGTATTGGGAAGAAAAGCGA
AACCAAACTGTGGAGACAAGATTTCTACGTTTCCCTGAACGACGATGAAG
CGCGCTTGGATACCCAGTATGATGCGATTCTAGGGACTCAGTGCAGTGTC
GGACGGTTCACGGATAAGAATGCCCTTCCAGTTGCTGTTACCCAGCTCGC
ATCGCAGAGTGCAAATGATAAGGCGGCCCAGGAGAAAAAGAAGCGGGAGA
AAGAGGAAGCTTTGGCGAAGAAGAACCAGCAGTTGCGTGAACAGCAGAAA
AAGCAGGCTTCTCAGGGTAAATAAATGTGGCAGCGTTCTCTGTGTGAGGC
CATCCACAGACAGCAGTTCGAAGCTTACGCTTCCTCTGGGGTGAACCGAC
AGAGCCGTAACAGCAAGCAAGTACACCCAACGCAAAGCCATGGACCCAAG
AGCATAGAAATTCGTTGCATCAGGCCAGAAGATGAAGACACCGTCTATCT
AAAGGCTGCTTTCTCTGAGCAATTGGACGTCAATATTCTCACGCAGAGGG
GTCTCCAAAGGCTGGAAGGAATTCTGCTGCAGCGCAATGAGATACCCAAA
ACGTTCTACGATTCCGATAGCGTTTCATACACAGTGCGCGATGTAGTCCG
CCTAAGTATTGGGAAGAAAAGCGAAACCAAACTGTGGAGACAAGATTTCT
ACGTTTCCCTGAACGACGATGAAGCGCGCTTGGATACCCAGTATGATGCG
ATTCTAGGGACTCAGTGCAGTGTCGGACGGTTCACGGATAAGAATGCCCT
TCCAGTTGCTGTTACCCAGCTCGCATCGCAGAGTGCAAATGATAAGGCGG
CCCAGGAGAAAAAGAAGCGGGAGAAAGAGGAAGCTTTGGCGAAGAAGAAC
CAGCAGTTGCGTGAACAGCAGAAAAAGCAGGCTTCTCAGGGTAAATAAAT
GTGGCAGCGTTCTCTGTGTGAGGCCATCCACAGACAGCAGTTCGAAGCTT
ACGCTTCCTCTGGGGTGAACCGACAGAGCCGTAACAGCAAGCAAGTACAC
CCAACGCAAAGCCATGGACCCAAGAGCATAGAAATTCGTTGCATCAGGCC
AGAAGATGAAGACACCGTCTATCTAAAGGCTGCTTTCTCTGAGCAATTGG
ACGTCAATATTCTCACGCAGAGGGGTCTCCAAAGGCTGGAAGGAATTCTG
CTGCAGCGCAATGAGATACCCAAAACGTTCTACGATTCCGATAGCGTTTC
ATACACAGTGCGCGATGTAGTCCGCCTAAGTATTGGGAAGAAAAGCGAAA
CCAAACTGTGGAGACAAGATTTCTACGTTTCCCTGAACGACGATGAAGCG
CGCTTGGATACCCAGTATGATGCGATTCTAGGGACTCAGTGCAGTGTCGG
ACGGTTCACGGATAAGAATGCCCTTCCAGTTGCTGTTACCCAGCTCGCAT
CGCAGAGTGCAAATGATAAGGCGGCCCAGGAGAAAAAGAAGCGGGAGAAA
GAGGAAGCTTTGGCGAAGAAGAACCAGCAGTTGCGTGAACAGCAGAAAAA
GCAGGCTTCTCAGGGTAAATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003039KJC3_003039Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003039-T1.exon1KJC3_003039-T1.exon1Aspergillus niger KJC3exon
KJC3_003039-T1.exon2KJC3_003039-T1.exon2Aspergillus niger KJC3exon
KJC3_003039-T1.exon3KJC3_003039-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003039-T1.cdsKJC3_003039-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003039-T1KJC3_003039-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:249998..250791 +