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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:251780..253325+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003040-T1 ID=KJC3_003040-T1|Name=KJC3_003040-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1546bp|location=Sequence derived from alignment at ch3:251780..253325+ (Aspergillus niger KJC3)
CCTTGGTGGGCTGAGCTGCATCCGCGGAAGGCCTCCCAGTGCTTCCATTC
CGTGTTCGAAACAGAACAGTAATACCCGAAGAGCCACTAATCGCTTGGGG
CCTATCGTCACATAAGGTCAGGCGCCAGGGATAGATTGTGTTGTGCCTGT
GCCACAAGCAAAACTTGTCTTTTGCTCCAGCCCTTCCCTGGCTTGACTGG
AAGGTGGTGACCCCCGCCTTCAAGCGAGGCTCAGGATTGATAACTCCCGC
GCCCGCCCGGGCATCGCGACCGCGACCGCCCATAATGGCTCCAGGTACTT
AGTCAACCTCTGTATATACTTGGGATTTCCTCAAGACTGATATCTCCATG
CCTGGCAATTACCCATGTAAGTGCTGCTCTTGTCAACCGTGGTCCTGCCC
TGCAATCTCCGCAACACGCAACACCCGACAAGGAATTGACCGGCTTTTAG
CCCCGAGACCGACGGCACCACGCGAGCGTGGCAAATGGAGGAAAAATGAG
AAAAATCATAAAATGGCCATGAGCCATGGCCACCACCAAAGTGGAAATAT
AAAAAGCCATGTATGTTCTGCGGCTTCATCTCAAACATACTTGGTGCTAA
AGTGCGAAGTAGGCCCTTCGGATTGCGCTAAAGGGGACAAAACACTTGTT
TCTCTTTCCCCTCTGGTCCACCCAAACGCACGGGCAACCGAAAGCGTCTC
TACCTTCGCCTCAGGATTACTATCCGTCAGAAAAGCGTCCACTTTCGCCA
GAGTATTGGGGTATAAAGGACTTTCAACGCTCTCAAATGCCTCTGGATGA
GCCATCTAAAAAGGAGGAGGTGTTGCATGAGACCCGCGAGGGCTTCCAGC
ACACCGAAGAGCGTGAGAGACTAACGGGAGTTCTGCAGACCGTGCTTGTC
AGTAATCCACCAAACCGCGATAACCAGCAGGATGTTCTAAATTGTGATTT
CATCTACGATATTCTCATATCCACTTTCGACAAGCCATTGAGACGACGCA
TGCTAGTGGACTTTGAAACAGAGGCTAATTTCATGGATCACGATGTCTTC
CAGAGAATGAATGTCCGCATGGACCCATATGATGGCCCGCCAACCCAACT
TACCACTCGGGGGGAATTGAGGCCCGTAGGTAAAGTGCAGGCAACATGGA
CTATTTGTGGCCACGAAAAGCCATATTGTGCCGATTTTTACGTTGTTCGA
GGTACCAGTTTTGATATCATCCTTGGCACCACTTCATGCCGGGATATCGG
TCTTTACCGTATGGATCCTATGGTTGCCAGACGACTCGGTAACCCGGAAC
AGACATAGCGACTACAATAATGTATTCATAGACAGGGTTTGTTTTATTTG
CTGGCGTTTACTGTATGTACATGTTTTGGGATAAAAGACTGGCTCTATCT
CATACAATATTTCGGAGAACACAGGAACGGGCTGATTGGAATAATATCAA
ACTGCTACCTGGCAGTGTTGCTACCCACGTATTTTAGAACTCAATAGTAG
AGTATGTGCTGGCCAATCTGCAGAGCTGCCCTATGCACTGAACGGC back to topCoding sequence (CDS) from alignment at ch3:251780..253325+ >KJC3_003040-T1 ID=KJC3_003040-T1|Name=KJC3_003040-T1|organism=Aspergillus niger KJC3|type=CDS|length=2475bp|location=Sequence derived from alignment at ch3:251780..253325+ (Aspergillus niger KJC3)
ATGCCTGGCAATTACCCATCCCCGAGACCGACGGCACCACGCGAGCGTGG
CAAATGGAGGAAAAATGAGAAAAATCATAAAATGGCCATGAGCCATGGCC
ACCACCAAAGTGGAAATATAAAAAGCCATGCCCTTCGGATTGCGCTAAAG
GGGACAAAACACTTGTTTCTCTTTCCCCTCTGGTCCACCCAAACGCACGG
GCAACCGAAAGCGTCTCTACCTTCGCCTCAGGATTACTATCCGTCAGAAA
AGCGTCCACTTTCGCCAGAGTATTGGGGTATAAAGGACTTTCAACGCTCT
CAAATGCCTCTGGATGAGCCATCTAAAAAGGAGGAGGTGTTGCATGAGAC
CCGCGAGGGCTTCCAGCACACCGAAGAGCGTGAGAGACTAACGGGAGTTC
TGCAGACCGTGCTTGTCAGTAATCCACCAAACCGCGATAACCAGCAGGAT
GTTCTAAATTGTGATTTCATCTACGATATTCTCATATCCACTTTCGACAA
GCCATTGAGACGACGCATGCTAGTGGACTTTGAAACAGAGGCTAATTTCA
TGGATCACGATGTCTTCCAGAGAATGAATGTCCGCATGGACCCATATGAT
GGCCCGCCAACCCAACTTACCACTCGGGGGGAATTGAGGCCCGTAGGTAA
AGTGCAGGCAACATGGACTATTTGTGGCCACGAAAAGCCATATTGTGCCG
ATTTTTACGTTGTTCGAGGTACCAGTTTTGATATCATCCTTGGCACCACT
TCATGCCGGGATATCGGTCTTTACCGTATGGATCCTATGGTTGCCAGACG
ACTCGGTAACCCGGAACAGACATAGATGCCTGGCAATTACCCATCCCCGA
GACCGACGGCACCACGCGAGCGTGGCAAATGGAGGAAAAATGAGAAAAAT
CATAAAATGGCCATGAGCCATGGCCACCACCAAAGTGGAAATATAAAAAG
CCATGCCCTTCGGATTGCGCTAAAGGGGACAAAACACTTGTTTCTCTTTC
CCCTCTGGTCCACCCAAACGCACGGGCAACCGAAAGCGTCTCTACCTTCG
CCTCAGGATTACTATCCGTCAGAAAAGCGTCCACTTTCGCCAGAGTATTG
GGGTATAAAGGACTTTCAACGCTCTCAAATGCCTCTGGATGAGCCATCTA
AAAAGGAGGAGGTGTTGCATGAGACCCGCGAGGGCTTCCAGCACACCGAA
GAGCGTGAGAGACTAACGGGAGTTCTGCAGACCGTGCTTGTCAGTAATCC
ACCAAACCGCGATAACCAGCAGGATGTTCTAAATTGTGATTTCATCTACG
ATATTCTCATATCCACTTTCGACAAGCCATTGAGACGACGCATGCTAGTG
GACTTTGAAACAGAGGCTAATTTCATGGATCACGATGTCTTCCAGAGAAT
GAATGTCCGCATGGACCCATATGATGGCCCGCCAACCCAACTTACCACTC
GGGGGGAATTGAGGCCCGTAGGTAAAGTGCAGGCAACATGGACTATTTGT
GGCCACGAAAAGCCATATTGTGCCGATTTTTACGTTGTTCGAGGTACCAG
TTTTGATATCATCCTTGGCACCACTTCATGCCGGGATATCGGTCTTTACC
GTATGGATCCTATGGTTGCCAGACGACTCGGTAACCCGGAACAGACATAG
ATGCCTGGCAATTACCCATCCCCGAGACCGACGGCACCACGCGAGCGTGG
CAAATGGAGGAAAAATGAGAAAAATCATAAAATGGCCATGAGCCATGGCC
ACCACCAAAGTGGAAATATAAAAAGCCATGCCCTTCGGATTGCGCTAAAG
GGGACAAAACACTTGTTTCTCTTTCCCCTCTGGTCCACCCAAACGCACGG
GCAACCGAAAGCGTCTCTACCTTCGCCTCAGGATTACTATCCGTCAGAAA
AGCGTCCACTTTCGCCAGAGTATTGGGGTATAAAGGACTTTCAACGCTCT
CAAATGCCTCTGGATGAGCCATCTAAAAAGGAGGAGGTGTTGCATGAGAC
CCGCGAGGGCTTCCAGCACACCGAAGAGCGTGAGAGACTAACGGGAGTTC
TGCAGACCGTGCTTGTCAGTAATCCACCAAACCGCGATAACCAGCAGGAT
GTTCTAAATTGTGATTTCATCTACGATATTCTCATATCCACTTTCGACAA
GCCATTGAGACGACGCATGCTAGTGGACTTTGAAACAGAGGCTAATTTCA
TGGATCACGATGTCTTCCAGAGAATGAATGTCCGCATGGACCCATATGAT
GGCCCGCCAACCCAACTTACCACTCGGGGGGAATTGAGGCCCGTAGGTAA
AGTGCAGGCAACATGGACTATTTGTGGCCACGAAAAGCCATATTGTGCCG
ATTTTTACGTTGTTCGAGGTACCAGTTTTGATATCATCCTTGGCACCACT
TCATGCCGGGATATCGGTCTTTACCGTATGGATCCTATGGTTGCCAGACG
ACTCGGTAACCCGGAACAGACATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003040-T1.utr5p1 | KJC3_003040-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003040-T1.utr3p1 | KJC3_003040-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021109 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:251780..253325 + |
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