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KJC3_003048-T1, KJC3_003048-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003048-T1
Unique NameKJC3_003048-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:272796..273358+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003048-T1 ID=KJC3_003048-T1|Name=KJC3_003048-T1|organism=Aspergillus niger KJC3|type=mRNA|length=563bp|location=Sequence derived from alignment at ch3:272796..273358+ (Aspergillus niger KJC3)
CGCTTTAGTAGTCAAATATAAGTAAACACTGCGAGGGTCTGATTTGAGAT
GAGGAGATAAGAAGAGAACTACCTACAGATTACAGTAACTCGCGGAACTC
TATACAATGCCAAAGGAACCAAACGAGCAGAAGTCACCCAAGTCCCCAAC
CTCACCCAAGAAGATGATGCGACAGAAACGAGACCGGCGCAAAAAGAGCC
TCTTACGAAAGGCCTACGAATACAGCAAGCTGTGTGATGCTGACGTCTGC
CTGGGTATTCGCATTCGAGAGTCTGGCCAAGTCACTACATTTCTCTCCGA
TTCGACAGGATTCTGGTCAGGCCTTTCCTCGCAACTAGTACGTTTTCAGC
ATGCTTGCTGTCGGTATGTAAACTAACACTAAATAGGAAATATACTATCC
ACGGCCGACTCAGAAAACGGAGAAGGATTTTGACTCCAATCCTACAACTG
ATGATGACTCAGCTGCAGCCGAAGACGTCAAAGGGGGAGAACAATGAGAA
GACCCATAACTATTTGTTATGATTAGACACACTGAGATGACCATCGGAAT
GCATGCACTGGCT
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Coding sequence (CDS) from alignment at ch3:272796..273358+

>KJC3_003048-T1 ID=KJC3_003048-T1|Name=KJC3_003048-T1|organism=Aspergillus niger KJC3|type=CDS|length=684bp|location=Sequence derived from alignment at ch3:272796..273358+ (Aspergillus niger KJC3)
ATGCCAAAGGAACCAAACGAGCAGAAGTCACCCAAGTCCCCAACCTCACC
CAAGAAGATGATGCGACAGAAACGAGACCGGCGCAAAAAGAGCCTCTTAC
GAAAGGCCTACGAATACAGCAAGCTGTGTGATGCTGACGTCTGCCTGGGT
ATTCGCATTCGAGAGTCTGGCCAAGTCACTACATTTCTCTCCGATTCGAC
AGGATTCTGGTCAGGCCTTTCCTCGCAACTAGAAATATACTATCCACGGC
CGACTCAGAAAACGGAGAAGGATTTTGACTCCAATCCTACAACTGATGAT
GACTCAGCTGCAGCCGAAGACGTCAAAGGGGGAGAACAATGAATGCCAAA
GGAACCAAACGAGCAGAAGTCACCCAAGTCCCCAACCTCACCCAAGAAGA
TGATGCGACAGAAACGAGACCGGCGCAAAAAGAGCCTCTTACGAAAGGCC
TACGAATACAGCAAGCTGTGTGATGCTGACGTCTGCCTGGGTATTCGCAT
TCGAGAGTCTGGCCAAGTCACTACATTTCTCTCCGATTCGACAGGATTCT
GGTCAGGCCTTTCCTCGCAACTAGAAATATACTATCCACGGCCGACTCAG
AAAACGGAGAAGGATTTTGACTCCAATCCTACAACTGATGATGACTCAGC
TGCAGCCGAAGACGTCAAAGGGGGAGAACAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003048KJC3_003048Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003048-T1.utr5p1KJC3_003048-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003048-T1.exon1KJC3_003048-T1.exon1Aspergillus niger KJC3exon
KJC3_003048-T1.exon2KJC3_003048-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003048-T1.cdsKJC3_003048-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003048-T1.utr3p1KJC3_003048-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003048-T1KJC3_003048-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036879
DBxrefInterPro:IPR002100
DBxrefPFAM:PF00319
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:272796..273358 +
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