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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:303400..305391- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003053-T1 ID=KJC3_003053-T1|Name=KJC3_003053-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1992bp|location=Sequence derived from alignment at ch3:303400..305391- (Aspergillus niger KJC3)
GGCGCTTTCAGGTCTCAATATTTATTATCGAGTCCGCCCACATTTGCTCA
CACCTGCCCGTCCCTGCTCACATCCGCCCGTCTCTGCTCACATCTGTCCG
TCCCTGCTCACACCTGCCTATCTGCCTTCATCTGCGTTGCTGGCACGTAT
TCAACGCACCATGAAATCCGCCAATCAGCATACAGTCTCTTTACTTGAAG
CGGAGAGAAGAAAGTTTGATGGTAAAGACTACACCCCACCTCCTCGTCTC
ATGCAGCGATGCAAAGCTGCTTTTCGACTATTGAAAAGCGATCTCTCCAA
GCAGCCAAGGCAGACACGTCAACGGAATACCAACGCTCAAAAAAATCTGG
CCGCAATTTTCGAGAAGAGCGTGGATATTTTTGTTCTCCGCTCTTTGACT
TCAACATTGTCCCAGCTTGGCTCGAAGCGCGAGTATGGACTCGCCCCGAT
ATTGATCAGATGGTGGACTGGCGTGCAACATCCGCAGAGTCTCAGCAATA
TATCACGGGACCTCTGCGCGGAGTTCGGCCTGCAATACCTGGAAAACGCA
AATATCTCAAAGACGACTTATCAGGATGCCAGAGTTCCTGAAGTCTCAAG
CAGTGATGGGCTGGACCTGGTTACAACAGGAATGGGTTCTAACGACGACA
ATCTGTTTCATGAAGGTGAAAATGTAGAAGACTCTCCCAGAGAAGGCTTT
CCAACCACCCGCCACCCGTTCGGTATGGCAAGATTTCTGGATTCTGAATA
TGGAAATGGAAGAATGCCGGATCAATACCATGCTCAATTGGACCGGCGAG
ACGAGAATCCTCTACAAGTGACCACTCCAAGAAGTGCACACGGTATGTTT
ATAGTACATCCATCCTATGAAGCATGACTAACCGCTATTTAGATATGAAT
CAACTGCCCCGCCCGGAAAACCAGCCTTTGCAATCGATCCTTCCCTTCCA
GAAGTTCGAATTGCTCGAGTTCTTTGATTCTCCGGAAAATTCTTGGGGAA
GAAGCACACTTTCAAGTGTTCTTCCTTCTGCTCGTCAGGACCTAAGGTTG
CTTATGCCTTGGAGTGGTACACCTCTTCCTTGCCTGGAAGTCAAACTGGA
AGTGCCAATAGAATTCAGTGAAGCATTTATGAAATTCCGCCAATCTAGAC
TTGGCGTCGGAAATATCGAACAGAAGGCTGCCCATAAAAACGACAACTCT
GGCCTTGCCTTAGAACAATGAGCCACCATTCAGTGCCCCGATCCGGACCT
GTCATCATAATGTCCAACTCATTTCCGTGAACATACACGGCGCCCACTCC
GCCGTCTATCTGAACAAGAACTGCACAAGCCGTATTCCAATTAACAGAAT
CCAAATCATGTACCTCGGCAGTTGTTGCAGACACTGTCACGTCTTCGCCC
GTCAACTCCTTCACTTTGGCCTTAAGAAGCACATCATCATGCGCGATATC
ATCCACTCGAACCTTTTGTTCTTGTTTTGTCTCGCGCGTTCCGTCCGGTC
CCCCAGCCATGGCCGCAACAAACGGGTTTGTTAATAGGGCGCAGAGTGCA
GATAACGAAGCGGTCATATGTTCGATATGGCAGGGAAGGAGTGCGGAACT
TTTGAATGATTGGGCCCCTGCATTATGGAGTTAGTCAGTAGAGAACCCGA
GTTTTCTTGACATATTGTGGGGACAATAGTCTCACTAGTGATAATTTTGC
GACTGCAATATTCTCTTTGGTATCTCTGATCTCGTCTTGCAAGTTCGCCA
ACATGAGCATCAAGACATCTTCAAATACCAAGATAATTTGAACGAGAAGA
CTGTTTGCGGTGAGAAATACTCAAAATGCTGTTGGGCATCCATACATCAT
TTTTCAGACGAGATAGGATAGGGTGAACTTGCCTAGAGCCTTCGACAAGC
GGGAATTAGGAGGGGTAGGTAACGTGACATTGAAACCTGCCGGTTACTTC
CGGAAAGACGGGGGAGACCGGGATAGTACGTTTTTATATCAC back to topCoding sequence (CDS) from alignment at ch3:303400..305391- >KJC3_003053-T1 ID=KJC3_003053-T1|Name=KJC3_003053-T1|organism=Aspergillus niger KJC3|type=CDS|length=2022bp|location=Sequence derived from alignment at ch3:303400..305391- (Aspergillus niger KJC3)
ATATGAATCAACTGCCCCGCCCGGAAAACCAGCCTTTGCAATCGATCCTT
CCCTTCCAGAAGTTCGAATTGCTCGAGTTCTTTGATTCTCCGGAAAATTC
TTGGGGAAGAAGCACACTTTCAAGTGTTCTTCCTTCTGCTCGTCAGGACC
TAAGGTTGCTTATGCCTTGGAGTGGTACACCTCTTCCTTGCCTGGAAGTC
AAACTGGAAGTGCCAATAGAATTCAGTGAAGCATTTATGAAATTCCGCCA
ATCTAGACTTGGCGTCGGAAATATCGAACAGAAGGCTGCCCATAAAAACG
ACAACTCTGGCCTTGCCTTAGAACAATGAATGAAATCCGCCAATCAGCAT
ACAGTCTCTTTACTTGAAGCGGAGAGAAGAAAGTTTGATGGTAAAGACTA
CACCCCACCTCCTCGTCTCATGCAGCGATGCAAAGCTGCTTTTCGACTAT
TGAAAAGCGATCTCTCCAAGCAGCCAAGGCAGACACGTCAACGGAATACC
AACGCTCAAAAAAATCTGGCCGCAATTTTCGAGAAGAGCGTGGATATTTT
TGTTCTCCGCTCTTTGACTTCAACATTGTCCCAGCTTGGCTCGAAGCGCG
AGTATGGACTCGCCCCGATATTGATCAGATGGTGGACTGGCGTGCAACAT
CCGCAGAGTCTCAGCAATATATCACGGGACCTCTGCGCGGAGTTCGGCCT
GCAATACCTGGAAAACGCAAATATCTCAAAGACGACTTATCAGGATGCCA
GAGTTCCTGAAGTCTCAAGCAGTGATGGGCTGGACCTGGTTACAACAGGA
ATGGGTTCTAACGACGACAATCTGTTTCATGAAGGTGAAAATGTAGAAGA
CTCTCCCAGAGAAGGCTTTCCAACCACCCGCCACCCGTTCGGTATGGCAA
GATTTCTGGATTCTGAATATGGAAATGGAAGAATGCCGGATCAATACCAT
GCTCAATTGGACCGGCGAGACGAGAATCCTCTACAAGTGACCACTCCAAG
AAGTGCACACGATATGAATCAACTGCCCCGCCCGGAAAACCAGCCTTTGC
AATCGATCCTTCCCTTCCAGAAGTTCGAATTGCTCGAGTTCTTTGATTCT
CCGGAAAATTCTTGGGGAAGAAGCACACTTTCAAGTGTTCTTCCTTCTGC
TCGTCAGGACCTAAGGTTGCTTATGCCTTGGAGTGGTACACCTCTTCCTT
GCCTGGAAGTCAAACTGGAAGTGCCAATAGAATTCAGTGAAGCATTTATG
AAATTCCGCCAATCTAGACTTGGCGTCGGAAATATCGAACAGAAGGCTGC
CCATAAAAACGACAACTCTGGCCTTGCCTTAGAACAATGAATGAAATCCG
CCAATCAGCATACAGTCTCTTTACTTGAAGCGGAGAGAAGAAAGTTTGAT
GGTAAAGACTACACCCCACCTCCTCGTCTCATGCAGCGATGCAAAGCTGC
TTTTCGACTATTGAAAAGCGATCTCTCCAAGCAGCCAAGGCAGACACGTC
AACGGAATACCAACGCTCAAAAAAATCTGGCCGCAATTTTCGAGAAGAGC
GTGGATATTTTTGTTCTCCGCTCTTTGACTTCAACATTGTCCCAGCTTGG
CTCGAAGCGCGAGTATGGACTCGCCCCGATATTGATCAGATGGTGGACTG
GCGTGCAACATCCGCAGAGTCTCAGCAATATATCACGGGACCTCTGCGCG
GAGTTCGGCCTGCAATACCTGGAAAACGCAAATATCTCAAAGACGACTTA
TCAGGATGCCAGAGTTCCTGAAGTCTCAAGCAGTGATGGGCTGGACCTGG
TTACAACAGGAATGGGTTCTAACGACGACAATCTGTTTCATGAAGGTGAA
AATGTAGAAGACTCTCCCAGAGAAGGCTTTCCAACCACCCGCCACCCGTT
CGGTATGGCAAGATTTCTGGATTCTGAATATGGAAATGGAAGAATGCCGG
ATCAATACCATGCTCAATTGGACCGGCGAGACGAGAATCCTCTACAAGTG
ACCACTCCAAGAAGTGCACACG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003053-T1.utr3p1 | KJC3_003053-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003053-T1.utr5p1 | KJC3_003053-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:303400..305391 - |
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