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KJC3_003066-T1, KJC3_003066-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003066-T1
Unique NameKJC3_003066-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:393928..395106-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003066-T1 ID=KJC3_003066-T1|Name=KJC3_003066-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1179bp|location=Sequence derived from alignment at ch3:393928..395106- (Aspergillus niger KJC3)
CTTACACACTCACACCCTCAATTCTATTCAACCCTCTTTCTCTGAGTTAT
TATCCTTCCTCCCACATCTACAATGGTCATCAGAGGCACTCAATTAGATG
GCGTCGCTCTGGTCGTCGGCGTAAGAACCTTCCCTCTCCCCCACCACCTC
AAACAGATGGTTTCCTCCTCCCAAACTAACCTCCCATAAATCCAGTCTGG
TCGCGGCATCGGCCAACAAACCGCTTTCTCCCTAGCCGAAGCAGGCGCCC
GCGTCATCGTCTTCGCCGACATGAACACCGAAACAGCCACTGCCTCCGCC
GAAGAGAGCAAGCAATACGCCACAAACCCCGAATACCAATCCACCCACTT
CACCGTTAACGTGACCGATCAAGATGGCGTGCAAGCCATGGTTGACTTTG
TCGTCGAGAAGTTCGGACGGCTGGACTATGCCGTCAACGCTGCAGGAGTG
AGTCCCATCCACCATCATTATCCGTTAAGAATATTCCACAACAACCTAGC
GCATGGTTCTCTTCCCACCAAGCTAACTCAAAAAAATCCAACTAGGTCGA
CAACAGCGTACACACCCCCTTCGCCGACACCGACATCGACAACTTCGACC
GCGTCCAGACCATCAACGCCCGCGGTATGTTCCTCTGCTGCCGCGCCGAA
GCCGCCGCCATGCGCAAGCAGACCTCACGCACCTTCACTAGCCGCACCAG
CACCCGGGACATTGGTCGCGGCGCCATCGTGAACGTCTGCTCAGCCAACT
CCTTCGCCGGACTGCCCGGGAAGGGATCATATACCGTCTCCAAGCATGCC
TGCATAGCGGTGACGAAGATAGTTAGTATGTTTATCTCCTCCCCCAATAC
CTTATACACGATACTATCCTATTCAATCCAACTCCCGTTATAAACATATA
TAAATATTATCTAGTACAGGACTAGACCACTCCGCCGAAGGCATCCGCTG
CAACGCCGTATGTCCCATCCGGGTCCGCACCCCTCTCCTCGACGTCGAGT
TGGAGCGGAACCCGCAGGTGCGCGCGGAAATCGAGGCCGTTATACCCATT
AAGCGTGCGGCGGAGAGTGATGAGGTGGGAGATACGATTGTTTATTTGCT
TAGTCCGTCGGCGAGTTATGTTAATGCTACGAGTTTGTTGTTGGATGCGG
CGGTTACGGCGACGTTGAGGTTTCATTGA
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Coding sequence (CDS) from alignment at ch3:393928..395106-

>KJC3_003066-T1 ID=KJC3_003066-T1|Name=KJC3_003066-T1|organism=Aspergillus niger KJC3|type=CDS|length=3360bp|location=Sequence derived from alignment at ch3:393928..395106- (Aspergillus niger KJC3)
GACTAGACCACTCCGCCGAAGGCATCCGCTGCAACGCCGTATGTCCCATC
CGGGTCCGCACCCCTCTCCTCGACGTCGAGTTGGAGCGGAACCCGCAGGT
GCGCGCGGAAATCGAGGCCGTTATACCCATTAAGCGTGCGGCGGAGAGTG
ATGAGGTGGGAGATACGATTGTTTATTTGCTTAGTCCGTCGGCGAGTTAT
GTTAATGCTACGAGTTTGTTGTTGGATGCGGCGGTTACGGCGACGTTGAG
GTTTCATTGAGTCGACAACAGCGTACACACCCCCTTCGCCGACACCGACA
TCGACAACTTCGACCGCGTCCAGACCATCAACGCCCGCGGTATGTTCCTC
TGCTGCCGCGCCGAAGCCGCCGCCATGCGCAAGCAGACCTCACGCACCTT
CACTAGCCGCACCAGCACCCGGGACATTGGTCGCGGCGCCATCGTGAACG
TCTGCTCAGCCAACTCCTTCGCCGGACTGCCCGGGAAGGGATCATATACC
GTCTCCAAGCATGCCTGCATAGCGGTGACGAAGATAGTTATCTGGTCGCG
GCATCGGCCAACAAACCGCTTTCTCCCTAGCCGAAGCAGGCGCCCGCGTC
ATCGTCTTCGCCGACATGAACACCGAAACAGCCACTGCCTCCGCCGAAGA
GAGCAAGCAATACGCCACAAACCCCGAATACCAATCCACCCACTTCACCG
TTAACGTGACCGATCAAGATGGCGTGCAAGCCATGGTTGACTTTGTCGTC
GAGAAGTTCGGACGGCTGGACTATGCCGTCAACGCTGCAGGAATGGTCAT
CAGAGGCACTCAATTAGATGGCGTCGCTCTGGTCGTCGGCGACTAGACCA
CTCCGCCGAAGGCATCCGCTGCAACGCCGTATGTCCCATCCGGGTCCGCA
CCCCTCTCCTCGACGTCGAGTTGGAGCGGAACCCGCAGGTGCGCGCGGAA
ATCGAGGCCGTTATACCCATTAAGCGTGCGGCGGAGAGTGATGAGGTGGG
AGATACGATTGTTTATTTGCTTAGTCCGTCGGCGAGTTATGTTAATGCTA
CGAGTTTGTTGTTGGATGCGGCGGTTACGGCGACGTTGAGGTTTCATTGA
GTCGACAACAGCGTACACACCCCCTTCGCCGACACCGACATCGACAACTT
CGACCGCGTCCAGACCATCAACGCCCGCGGTATGTTCCTCTGCTGCCGCG
CCGAAGCCGCCGCCATGCGCAAGCAGACCTCACGCACCTTCACTAGCCGC
ACCAGCACCCGGGACATTGGTCGCGGCGCCATCGTGAACGTCTGCTCAGC
CAACTCCTTCGCCGGACTGCCCGGGAAGGGATCATATACCGTCTCCAAGC
ATGCCTGCATAGCGGTGACGAAGATAGTTATCTGGTCGCGGCATCGGCCA
ACAAACCGCTTTCTCCCTAGCCGAAGCAGGCGCCCGCGTCATCGTCTTCG
CCGACATGAACACCGAAACAGCCACTGCCTCCGCCGAAGAGAGCAAGCAA
TACGCCACAAACCCCGAATACCAATCCACCCACTTCACCGTTAACGTGAC
CGATCAAGATGGCGTGCAAGCCATGGTTGACTTTGTCGTCGAGAAGTTCG
GACGGCTGGACTATGCCGTCAACGCTGCAGGAATGGTCATCAGAGGCACT
CAATTAGATGGCGTCGCTCTGGTCGTCGGCGACTAGACCACTCCGCCGAA
GGCATCCGCTGCAACGCCGTATGTCCCATCCGGGTCCGCACCCCTCTCCT
CGACGTCGAGTTGGAGCGGAACCCGCAGGTGCGCGCGGAAATCGAGGCCG
TTATACCCATTAAGCGTGCGGCGGAGAGTGATGAGGTGGGAGATACGATT
GTTTATTTGCTTAGTCCGTCGGCGAGTTATGTTAATGCTACGAGTTTGTT
GTTGGATGCGGCGGTTACGGCGACGTTGAGGTTTCATTGAGTCGACAACA
GCGTACACACCCCCTTCGCCGACACCGACATCGACAACTTCGACCGCGTC
CAGACCATCAACGCCCGCGGTATGTTCCTCTGCTGCCGCGCCGAAGCCGC
CGCCATGCGCAAGCAGACCTCACGCACCTTCACTAGCCGCACCAGCACCC
GGGACATTGGTCGCGGCGCCATCGTGAACGTCTGCTCAGCCAACTCCTTC
GCCGGACTGCCCGGGAAGGGATCATATACCGTCTCCAAGCATGCCTGCAT
AGCGGTGACGAAGATAGTTATCTGGTCGCGGCATCGGCCAACAAACCGCT
TTCTCCCTAGCCGAAGCAGGCGCCCGCGTCATCGTCTTCGCCGACATGAA
CACCGAAACAGCCACTGCCTCCGCCGAAGAGAGCAAGCAATACGCCACAA
ACCCCGAATACCAATCCACCCACTTCACCGTTAACGTGACCGATCAAGAT
GGCGTGCAAGCCATGGTTGACTTTGTCGTCGAGAAGTTCGGACGGCTGGA
CTATGCCGTCAACGCTGCAGGAATGGTCATCAGAGGCACTCAATTAGATG
GCGTCGCTCTGGTCGTCGGCGACTAGACCACTCCGCCGAAGGCATCCGCT
GCAACGCCGTATGTCCCATCCGGGTCCGCACCCCTCTCCTCGACGTCGAG
TTGGAGCGGAACCCGCAGGTGCGCGCGGAAATCGAGGCCGTTATACCCAT
TAAGCGTGCGGCGGAGAGTGATGAGGTGGGAGATACGATTGTTTATTTGC
TTAGTCCGTCGGCGAGTTATGTTAATGCTACGAGTTTGTTGTTGGATGCG
GCGGTTACGGCGACGTTGAGGTTTCATTGAGTCGACAACAGCGTACACAC
CCCCTTCGCCGACACCGACATCGACAACTTCGACCGCGTCCAGACCATCA
ACGCCCGCGGTATGTTCCTCTGCTGCCGCGCCGAAGCCGCCGCCATGCGC
AAGCAGACCTCACGCACCTTCACTAGCCGCACCAGCACCCGGGACATTGG
TCGCGGCGCCATCGTGAACGTCTGCTCAGCCAACTCCTTCGCCGGACTGC
CCGGGAAGGGATCATATACCGTCTCCAAGCATGCCTGCATAGCGGTGACG
AAGATAGTTATCTGGTCGCGGCATCGGCCAACAAACCGCTTTCTCCCTAG
CCGAAGCAGGCGCCCGCGTCATCGTCTTCGCCGACATGAACACCGAAACA
GCCACTGCCTCCGCCGAAGAGAGCAAGCAATACGCCACAAACCCCGAATA
CCAATCCACCCACTTCACCGTTAACGTGACCGATCAAGATGGCGTGCAAG
CCATGGTTGACTTTGTCGTCGAGAAGTTCGGACGGCTGGACTATGCCGTC
AACGCTGCAGGAATGGTCATCAGAGGCACTCAATTAGATGGCGTCGCTCT
GGTCGTCGGC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003066KJC3_003066Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003066-T1KJC3_003066-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003066-T1.cdsKJC3_003066-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003066-T1.exon4KJC3_003066-T1.exon4Aspergillus niger KJC3exon
KJC3_003066-T1.exon3KJC3_003066-T1.exon3Aspergillus niger KJC3exon
KJC3_003066-T1.exon2KJC3_003066-T1.exon2Aspergillus niger KJC3exon
KJC3_003066-T1.exon1KJC3_003066-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003066-T1.utr5p1KJC3_003066-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:393928..395106 -
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