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KJC3_003085-T1, KJC3_003085-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003085-T1
Unique NameKJC3_003085-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:658169..659462+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003085-T1 ID=KJC3_003085-T1|Name=KJC3_003085-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1294bp|location=Sequence derived from alignment at ch3:658169..659462+ (Aspergillus niger KJC3)
ATGGCCCAGCATCGACATCAGTCATCCTTAGAATCTGTGTTGGATTTCTC
TCCTACACTTCTCTTAACACCTCAACAAAAACAAAAGGCTCATGCACTCC
TGCATCTCTTCATTCAGGATTATGGCCTCAGCCAAACCGTACAGAGGGGT
TACAGACCCGCAAAACTCATTTTGGAGATGTTTGACCGGGTAATTTCCAA
AGACGCCTTTATAAGACTCTTCTTTTTATATATTTATGAGAGCCTTAAAG
CTACCGGTGAAACTGCTGATAACGATATGGCTACTGCCCTGTCTTACCTT
GACTCCTTCGCTGAAGACGGAAGTATGGATCCAAGCAAATCGATGCGTAT
AAAGAGCGCTCTTGAAAGTTTTGCTGAGTATATCGTCGACAATTTCCTTC
TCCCACGTATGATTACCCCCTGTCCTTTACGATTATTTGCTAATGAGGCC
AATTAGTTAGGGCTTCATCAGTTAAAACACCACAAGCAACACCTACAGCA
TTGTCCTTGACTCAGACACCTACACAAGTGGGCACAAGACAGCGTGTCTC
TGCCTTACGGAAAGCCTGCCTTGTACGTGATCACCATCGGTGCGTGATAT
CCCGCAAGTTTGATATCGTCGAAGCCAGGAAGCGCAGCGCAGAGGATAGG
GATAACTGTAAAGACGACGATGGAAATCTACTGAGCAGTGAAGCACGGGG
CGGATTCCAGTATCTGGAAGTTGCGCACATCCTCCCACACAGCTTGACAA
CAGTGGCACAGGGAGAGTCAGAGCTGGTGCGTTATCGCCGACAATTGTCC
ATTAGCTGCGTACTAACCTTCCCAAGAGCGAGTCAAAAACGAATGTGTTC
CGTATACTTGATATGTTTGACCCTGGGCTCAGTCACCGTCTTGATGGAGC
GAATATCGATAGACCTGTTAATGCTCTTACGCTGACGCTTGAATATCATC
GACTATTTGGTGAATTTCAAATCTATTTCGAACCCACAGGGAGACCACAT
GAGTATAAGATTGAATCTCTTGAAGACAGTCCCTTCCTGCGCGATCCGTT
ATTTCCCGTCACTCGTACTCTGAGCCTTAGTCCCAACCGAACAATCGATC
CACCAGACTCCAGACTTCTCCGTGTCCACTGTGCCATTGCACATATTATG
AAACTCAGCGGGGCAGCAGAACATATCGAGAGTGTCCTTCGGGACATGGA
AGAGGTGGACGTTAAAGCTGATGGCTCAACAAATTTAGGTTATATGATGG
GTTTACGACTCAACGGTTGGGTAAACACTTTGTCAGTGTTTTAA
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Coding sequence (CDS) from alignment at ch3:658169..659462+

>KJC3_003085-T1 ID=KJC3_003085-T1|Name=KJC3_003085-T1|organism=Aspergillus niger KJC3|type=CDS|length=3582bp|location=Sequence derived from alignment at ch3:658169..659462+ (Aspergillus niger KJC3)
ATGGCCCAGCATCGACATCAGTCATCCTTAGAATCTGTGTTGGATTTCTC
TCCTACACTTCTCTTAACACCTCAACAAAAACAAAAGGCTCATGCACTCC
TGCATCTCTTCATTCAGGATTATGGCCTCAGCCAAACCGTACAGAGGGGT
TACAGACCCGCAAAACTCATTTTGGAGATGTTTGACCGGGTAATTTCCAA
AGACGCCTTTATAAGACTCTTCTTTTTATATATTTATGAGAGCCTTAAAG
CTACCGGTGAAACTGCTGATAACGATATGGCTACTGCCCTGTCTTACCTT
GACTCCTTCGCTGAAGACGGAAGTATGGATCCAAGCAAATCGATGCGTAT
AAAGAGCGCTCTTGAAAGTTTTGCTGAGTATATCGTCGACAATTTCCTTC
TCCCACTTAGGGCTTCATCAGTTAAAACACCACAAGCAACACCTACAGCA
TTGTCCTTGACTCAGACACCTACACAAGTGGGCACAAGACAGCGTGTCTC
TGCCTTACGGAAAGCCTGCCTTGTACGTGATCACCATCGGTGCGTGATAT
CCCGCAAGTTTGATATCGTCGAAGCCAGGAAGCGCAGCGCAGAGGATAGG
GATAACTGTAAAGACGACGATGGAAATCTACTGAGCAGTGAAGCACGGGG
CGGATTCCAGTATCTGGAAGTTGCGCACATCCTCCCACACAGCTTGACAA
CAGTGGCACAGGGAGAGTCAGAGCTGAGCGAGTCAAAAACGAATGTGTTC
CGTATACTTGATATGTTTGACCCTGGGCTCAGTCACCGTCTTGATGGAGC
GAATATCGATAGACCTGTTAATGCTCTTACGCTGACGCTTGAATATCATC
GACTATTTGGTGAATTTCAAATCTATTTCGAACCCACAGGGAGACCACAT
GAGTATAAGATTGAATCTCTTGAAGACAGTCCCTTCCTGCGCGATCCGTT
ATTTCCCGTCACTCGTACTCTGAGCCTTAGTCCCAACCGAACAATCGATC
CACCAGACTCCAGACTTCTCCGTGTCCACTGTGCCATTGCACATATTATG
AAACTCAGCGGGGCAGCAGAACATATCGAGAGTGTCCTTCGGGACATGGA
AGAGGTGGACGTTAAAGCTGATGGCTCAACAAATTTAGGTTATATGATGG
GTTTACGACTCAACGGTTGGGTAAACACTTTGTCAGTGTTTTAAATGGCC
CAGCATCGACATCAGTCATCCTTAGAATCTGTGTTGGATTTCTCTCCTAC
ACTTCTCTTAACACCTCAACAAAAACAAAAGGCTCATGCACTCCTGCATC
TCTTCATTCAGGATTATGGCCTCAGCCAAACCGTACAGAGGGGTTACAGA
CCCGCAAAACTCATTTTGGAGATGTTTGACCGGGTAATTTCCAAAGACGC
CTTTATAAGACTCTTCTTTTTATATATTTATGAGAGCCTTAAAGCTACCG
GTGAAACTGCTGATAACGATATGGCTACTGCCCTGTCTTACCTTGACTCC
TTCGCTGAAGACGGAAGTATGGATCCAAGCAAATCGATGCGTATAAAGAG
CGCTCTTGAAAGTTTTGCTGAGTATATCGTCGACAATTTCCTTCTCCCAC
TTAGGGCTTCATCAGTTAAAACACCACAAGCAACACCTACAGCATTGTCC
TTGACTCAGACACCTACACAAGTGGGCACAAGACAGCGTGTCTCTGCCTT
ACGGAAAGCCTGCCTTGTACGTGATCACCATCGGTGCGTGATATCCCGCA
AGTTTGATATCGTCGAAGCCAGGAAGCGCAGCGCAGAGGATAGGGATAAC
TGTAAAGACGACGATGGAAATCTACTGAGCAGTGAAGCACGGGGCGGATT
CCAGTATCTGGAAGTTGCGCACATCCTCCCACACAGCTTGACAACAGTGG
CACAGGGAGAGTCAGAGCTGAGCGAGTCAAAAACGAATGTGTTCCGTATA
CTTGATATGTTTGACCCTGGGCTCAGTCACCGTCTTGATGGAGCGAATAT
CGATAGACCTGTTAATGCTCTTACGCTGACGCTTGAATATCATCGACTAT
TTGGTGAATTTCAAATCTATTTCGAACCCACAGGGAGACCACATGAGTAT
AAGATTGAATCTCTTGAAGACAGTCCCTTCCTGCGCGATCCGTTATTTCC
CGTCACTCGTACTCTGAGCCTTAGTCCCAACCGAACAATCGATCCACCAG
ACTCCAGACTTCTCCGTGTCCACTGTGCCATTGCACATATTATGAAACTC
AGCGGGGCAGCAGAACATATCGAGAGTGTCCTTCGGGACATGGAAGAGGT
GGACGTTAAAGCTGATGGCTCAACAAATTTAGGTTATATGATGGGTTTAC
GACTCAACGGTTGGGTAAACACTTTGTCAGTGTTTTAAATGGCCCAGCAT
CGACATCAGTCATCCTTAGAATCTGTGTTGGATTTCTCTCCTACACTTCT
CTTAACACCTCAACAAAAACAAAAGGCTCATGCACTCCTGCATCTCTTCA
TTCAGGATTATGGCCTCAGCCAAACCGTACAGAGGGGTTACAGACCCGCA
AAACTCATTTTGGAGATGTTTGACCGGGTAATTTCCAAAGACGCCTTTAT
AAGACTCTTCTTTTTATATATTTATGAGAGCCTTAAAGCTACCGGTGAAA
CTGCTGATAACGATATGGCTACTGCCCTGTCTTACCTTGACTCCTTCGCT
GAAGACGGAAGTATGGATCCAAGCAAATCGATGCGTATAAAGAGCGCTCT
TGAAAGTTTTGCTGAGTATATCGTCGACAATTTCCTTCTCCCACTTAGGG
CTTCATCAGTTAAAACACCACAAGCAACACCTACAGCATTGTCCTTGACT
CAGACACCTACACAAGTGGGCACAAGACAGCGTGTCTCTGCCTTACGGAA
AGCCTGCCTTGTACGTGATCACCATCGGTGCGTGATATCCCGCAAGTTTG
ATATCGTCGAAGCCAGGAAGCGCAGCGCAGAGGATAGGGATAACTGTAAA
GACGACGATGGAAATCTACTGAGCAGTGAAGCACGGGGCGGATTCCAGTA
TCTGGAAGTTGCGCACATCCTCCCACACAGCTTGACAACAGTGGCACAGG
GAGAGTCAGAGCTGAGCGAGTCAAAAACGAATGTGTTCCGTATACTTGAT
ATGTTTGACCCTGGGCTCAGTCACCGTCTTGATGGAGCGAATATCGATAG
ACCTGTTAATGCTCTTACGCTGACGCTTGAATATCATCGACTATTTGGTG
AATTTCAAATCTATTTCGAACCCACAGGGAGACCACATGAGTATAAGATT
GAATCTCTTGAAGACAGTCCCTTCCTGCGCGATCCGTTATTTCCCGTCAC
TCGTACTCTGAGCCTTAGTCCCAACCGAACAATCGATCCACCAGACTCCA
GACTTCTCCGTGTCCACTGTGCCATTGCACATATTATGAAACTCAGCGGG
GCAGCAGAACATATCGAGAGTGTCCTTCGGGACATGGAAGAGGTGGACGT
TAAAGCTGATGGCTCAACAAATTTAGGTTATATGATGGGTTTACGACTCA
ACGGTTGGGTAAACACTTTGTCAGTGTTTTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003085KJC3_003085Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003085-T1.exon1KJC3_003085-T1.exon1Aspergillus niger KJC3exon
KJC3_003085-T1.exon2KJC3_003085-T1.exon2Aspergillus niger KJC3exon
KJC3_003085-T1.exon3KJC3_003085-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003085-T1.cdsKJC3_003085-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003085-T1KJC3_003085-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003615
DBxrefPFAM:PF13391
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:658169..659462 +
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