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KJC3_003115-T1, KJC3_003115-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003115-T1
Unique NameKJC3_003115-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:844113..845422-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003115-T1 ID=KJC3_003115-T1|Name=KJC3_003115-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1310bp|location=Sequence derived from alignment at ch3:844113..845422- (Aspergillus niger KJC3)
ATGGCTGTTCCTCATCGCCGGCACCGTGCATCACTGGAATCGGTAATCGT
TCCTGAACCGCAACACTTGACGGCAGAAGAGCATGGCAAAGCAATTGAGC
TCTTTAACACCATCATTCATTATTTCGAGCCTCTGCAGGAATCGACCAAG
GAATACAAGCCGATCACCCTTGTACGCCTCACGAAGGAAGAGATTTCTGT
TAAAGATGAGTTTCTTCTCTTATTTTTCACATTCATTGAGCGTGATCGAC
TTGGAATTTCAGAGGACGAGCAAAAGAAAATTTGCCTGGCTGAGACCCTT
TCGAACATGCAAAATTTTCAGAGATGGACGAATGAAGAACGACATGCGCT
TGGCCACAGTTTGGTTAAGTTTGCCATGTATCTAATAGATAATTTCTTTC
TACCACGTATGTCACTCACGCGTACCTGCACAATGGGATACTTACTCTTC
CTAGTCAAAGCATTGGCCACAAAGACTCCTCAACCTACGCCAGCATCTGT
TTCTCGACTTATGTCGTCAGAACCAGCTATTGGCACCCCGCAACGTGTCT
CTAATTTGCGGCATCTCTGCCTTGTGCGTGACCGACATCGATGCGTTATA
ACCCGAAAATTCGACGCTCTGGAGGGTGAAGCACGGTACAACATCCATGG
GGACCAATTGACGGATGATGAGGGGAATTCTTTACTGCCAGAAAGCAGCG
ATATGGCGCTCCTAGAAGTGGCGCATATCATTCCTCATTCTCTCATGTCT
CTTAGCAACATTGAAGGAGAGCCGAAACTTGTATGTTACTAATTATACAT
ATGATCTTTTGCTGACATATCTTTTTCTAGACCGAGCGAAAGCATATCGC
CCACAAAATCCTCAAAATGTTCAACTCTACAGCTTTCCACTTGATCGAGG
GAACTGATATTGACCGACCAATGAACGCACTCACTTTGACTCATGATCTT
CACCGCTTGTTTGGTAATTTTGAAGTTGCATTTGAACCGGTCCAGAACCA
AGAGCACACATACAGGATTGACTTCGTGAAGACTAAACGCATCTGGCGAG
CCTACAATCTCCCTGTTACCCGCGAGCTCTTCATCACTCCCGACCGAAAC
ATCGAGCCGCCTCTTCGTCAGCTTTTGGAAATACATCGTGCTATCGCACG
CATTCTTCATCTTAGTGCAGCAGGTGAACATATCGATCGAGTTATTCAGG
ACATGGAAAAATTAAAGGTGGAGCCAGTGTACTCGGACGGGTCTTCTCGC
ATTGGTGAATACATCAATTATAAACTTGCCCATCAACTTGGTTGGACACA
TGTTCATTAG
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Coding sequence (CDS) from alignment at ch3:844113..845422-

>KJC3_003115-T1 ID=KJC3_003115-T1|Name=KJC3_003115-T1|organism=Aspergillus niger KJC3|type=CDS|length=3636bp|location=Sequence derived from alignment at ch3:844113..845422- (Aspergillus niger KJC3)
ACCGAGCGAAAGCATATCGCCCACAAAATCCTCAAAATGTTCAACTCTAC
AGCTTTCCACTTGATCGAGGGAACTGATATTGACCGACCAATGAACGCAC
TCACTTTGACTCATGATCTTCACCGCTTGTTTGGTAATTTTGAAGTTGCA
TTTGAACCGGTCCAGAACCAAGAGCACACATACAGGATTGACTTCGTGAA
GACTAAACGCATCTGGCGAGCCTACAATCTCCCTGTTACCCGCGAGCTCT
TCATCACTCCCGACCGAAACATCGAGCCGCCTCTTCGTCAGCTTTTGGAA
ATACATCGTGCTATCGCACGCATTCTTCATCTTAGTGCAGCAGGTGAACA
TATCGATCGAGTTATTCAGGACATGGAAAAATTAAAGGTGGAGCCAGTGT
ACTCGGACGGGTCTTCTCGCATTGGTGAATACATCAATTATAAACTTGCC
CATCAACTTGGTTGGACACATGTTCATTAGTCAAAGCATTGGCCACAAAG
ACTCCTCAACCTACGCCAGCATCTGTTTCTCGACTTATGTCGTCAGAACC
AGCTATTGGCACCCCGCAACGTGTCTCTAATTTGCGGCATCTCTGCCTTG
TGCGTGACCGACATCGATGCGTTATAACCCGAAAATTCGACGCTCTGGAG
GGTGAAGCACGGTACAACATCCATGGGGACCAATTGACGGATGATGAGGG
GAATTCTTTACTGCCAGAAAGCAGCGATATGGCGCTCCTAGAAGTGGCGC
ATATCATTCCTCATTCTCTCATGTCTCTTAGCAACATTGAAGGAGAGCCG
AAACTTATGGCTGTTCCTCATCGCCGGCACCGTGCATCACTGGAATCGGT
AATCGTTCCTGAACCGCAACACTTGACGGCAGAAGAGCATGGCAAAGCAA
TTGAGCTCTTTAACACCATCATTCATTATTTCGAGCCTCTGCAGGAATCG
ACCAAGGAATACAAGCCGATCACCCTTGTACGCCTCACGAAGGAAGAGAT
TTCTGTTAAAGATGAGTTTCTTCTCTTATTTTTCACATTCATTGAGCGTG
ATCGACTTGGAATTTCAGAGGACGAGCAAAAGAAAATTTGCCTGGCTGAG
ACCCTTTCGAACATGCAAAATTTTCAGAGATGGACGAATGAAGAACGACA
TGCGCTTGGCCACAGTTTGGTTAAGTTTGCCATGTATCTAATAGATAATT
TCTTTCTACCACACCGAGCGAAAGCATATCGCCCACAAAATCCTCAAAAT
GTTCAACTCTACAGCTTTCCACTTGATCGAGGGAACTGATATTGACCGAC
CAATGAACGCACTCACTTTGACTCATGATCTTCACCGCTTGTTTGGTAAT
TTTGAAGTTGCATTTGAACCGGTCCAGAACCAAGAGCACACATACAGGAT
TGACTTCGTGAAGACTAAACGCATCTGGCGAGCCTACAATCTCCCTGTTA
CCCGCGAGCTCTTCATCACTCCCGACCGAAACATCGAGCCGCCTCTTCGT
CAGCTTTTGGAAATACATCGTGCTATCGCACGCATTCTTCATCTTAGTGC
AGCAGGTGAACATATCGATCGAGTTATTCAGGACATGGAAAAATTAAAGG
TGGAGCCAGTGTACTCGGACGGGTCTTCTCGCATTGGTGAATACATCAAT
TATAAACTTGCCCATCAACTTGGTTGGACACATGTTCATTAGTCAAAGCA
TTGGCCACAAAGACTCCTCAACCTACGCCAGCATCTGTTTCTCGACTTAT
GTCGTCAGAACCAGCTATTGGCACCCCGCAACGTGTCTCTAATTTGCGGC
ATCTCTGCCTTGTGCGTGACCGACATCGATGCGTTATAACCCGAAAATTC
GACGCTCTGGAGGGTGAAGCACGGTACAACATCCATGGGGACCAATTGAC
GGATGATGAGGGGAATTCTTTACTGCCAGAAAGCAGCGATATGGCGCTCC
TAGAAGTGGCGCATATCATTCCTCATTCTCTCATGTCTCTTAGCAACATT
GAAGGAGAGCCGAAACTTATGGCTGTTCCTCATCGCCGGCACCGTGCATC
ACTGGAATCGGTAATCGTTCCTGAACCGCAACACTTGACGGCAGAAGAGC
ATGGCAAAGCAATTGAGCTCTTTAACACCATCATTCATTATTTCGAGCCT
CTGCAGGAATCGACCAAGGAATACAAGCCGATCACCCTTGTACGCCTCAC
GAAGGAAGAGATTTCTGTTAAAGATGAGTTTCTTCTCTTATTTTTCACAT
TCATTGAGCGTGATCGACTTGGAATTTCAGAGGACGAGCAAAAGAAAATT
TGCCTGGCTGAGACCCTTTCGAACATGCAAAATTTTCAGAGATGGACGAA
TGAAGAACGACATGCGCTTGGCCACAGTTTGGTTAAGTTTGCCATGTATC
TAATAGATAATTTCTTTCTACCACACCGAGCGAAAGCATATCGCCCACAA
AATCCTCAAAATGTTCAACTCTACAGCTTTCCACTTGATCGAGGGAACTG
ATATTGACCGACCAATGAACGCACTCACTTTGACTCATGATCTTCACCGC
TTGTTTGGTAATTTTGAAGTTGCATTTGAACCGGTCCAGAACCAAGAGCA
CACATACAGGATTGACTTCGTGAAGACTAAACGCATCTGGCGAGCCTACA
ATCTCCCTGTTACCCGCGAGCTCTTCATCACTCCCGACCGAAACATCGAG
CCGCCTCTTCGTCAGCTTTTGGAAATACATCGTGCTATCGCACGCATTCT
TCATCTTAGTGCAGCAGGTGAACATATCGATCGAGTTATTCAGGACATGG
AAAAATTAAAGGTGGAGCCAGTGTACTCGGACGGGTCTTCTCGCATTGGT
GAATACATCAATTATAAACTTGCCCATCAACTTGGTTGGACACATGTTCA
TTAGTCAAAGCATTGGCCACAAAGACTCCTCAACCTACGCCAGCATCTGT
TTCTCGACTTATGTCGTCAGAACCAGCTATTGGCACCCCGCAACGTGTCT
CTAATTTGCGGCATCTCTGCCTTGTGCGTGACCGACATCGATGCGTTATA
ACCCGAAAATTCGACGCTCTGGAGGGTGAAGCACGGTACAACATCCATGG
GGACCAATTGACGGATGATGAGGGGAATTCTTTACTGCCAGAAAGCAGCG
ATATGGCGCTCCTAGAAGTGGCGCATATCATTCCTCATTCTCTCATGTCT
CTTAGCAACATTGAAGGAGAGCCGAAACTTATGGCTGTTCCTCATCGCCG
GCACCGTGCATCACTGGAATCGGTAATCGTTCCTGAACCGCAACACTTGA
CGGCAGAAGAGCATGGCAAAGCAATTGAGCTCTTTAACACCATCATTCAT
TATTTCGAGCCTCTGCAGGAATCGACCAAGGAATACAAGCCGATCACCCT
TGTACGCCTCACGAAGGAAGAGATTTCTGTTAAAGATGAGTTTCTTCTCT
TATTTTTCACATTCATTGAGCGTGATCGACTTGGAATTTCAGAGGACGAG
CAAAAGAAAATTTGCCTGGCTGAGACCCTTTCGAACATGCAAAATTTTCA
GAGATGGACGAATGAAGAACGACATGCGCTTGGCCACAGTTTGGTTAAGT
TTGCCATGTATCTAATAGATAATTTCTTTCTACCAC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003115KJC3_003115Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003115-T1KJC3_003115-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003115-T1.cdsKJC3_003115-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003115-T1.exon3KJC3_003115-T1.exon3Aspergillus niger KJC3exon
KJC3_003115-T1.exon2KJC3_003115-T1.exon2Aspergillus niger KJC3exon
KJC3_003115-T1.exon1KJC3_003115-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR003615
DBxrefPFAM:PF13391
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:844113..845422 -
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