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KJC3_003127-T2, KJC3_003127-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003127-T2
Unique NameKJC3_003127-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:926046..928116+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003127-T2 ID=KJC3_003127-T2|Name=KJC3_003127-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2071bp|location=Sequence derived from alignment at ch3:926046..928116+ (Aspergillus niger KJC3)
ATGACAGTTCTTGACGAGACACGAAGTTCGTCAGGAGAATAATAGTGAAG
CAACAACTCCACGGGGGGTATCCTGACGCACCATGTCTGCGGGTTTTGAT
ACCCTCAAAGCACTGTTGTCGCGGTAATTTACCTCGATCTTGGTATTGAG
ACATGGGTTAAGACATGATTTATAGCATGCGAGAGGATGGGAAGTTCTCA
GATCTCGCGGTCAAATGCCAATCTTCAACCTTCCACGTTCATTGTTGCAT
TGTGTGCCCACAGTCGCCATTTTTCGACAAGGCGGCAAATGGTAATTTCG
AGGTAAATGGGTTGGCGATATAACCCAAAGCCTGGTCGTTAACTTCCACC
TACATAGGAATCTGAATCCCGCGTCATCAACATTCACGATGACCCTTTCA
TCGTATCCAAGTTGTTTGATTTTCTTTACCGTGCGGACTACGATGACTCA
CCTGACAATACGGATGATCCAGCTGCGGATAATGAATCTGCTGCGAACGA
AGAGGAAATATTACCGACAGAGCGTATCTCCCAAGATGCTCTTTCAAGGC
AGTGGAGGCGTGCACAGACCAATGTGCAAATCTATATTATAGCCGATAAG
TATATGATTGAAGGATTGAAAGATATATCCAAAAGAAAGTTGAATTCCAA
CATGGAAAATAACTGGGACGACTGCGGATTTCTCACGGTTGTCAGCGATG
TGTATGGGTCTCAGTGTCCGCCAAGATCAGACCTACGTGAAATTATCATA
CGCTTTGCTCTTCGACATCTCGGTACGCTTCAGAAATTCCGGCAGTTTGA
TGACGCTCGAAAAGAATACCCCGAGTTTGTGTATGAACTGTCCACGGCTT
TGATAGAACGAGTTGTCGAATTGGAAAAGAGAACATGGTAGGGGTGCCTT
TGTCCAGAACCTCACCCGCCTAGACTGTAAGGCTTAGTAATTCTATTTAG
TGACAATCAGATTGTTAAGCCGAGTATCTTCCGCTCTGTTCCTGTTCCAT
CCGTGCGACAAACGCCCAGACGTTTCTACTGCGGGCTTTGTACTAGGTCT
TTCGAGAGCAGAACTGGCCTTCGGCAGCATGACAGCGCTGTACATAGCTG
GTGCACTGATTGTGGACAACCATTCCGGTCGCCCGAAAAAGCTCGAAAAC
ACCGCCTGAGCAGACATGGTGGGTTTTAGTGGGAAGAGAACTTGTCCATT
GTATTTAGTGTGGAAGGTACATCTGCTTCGTGGCACGGATGTCGCACGGT
CGTTGTTATGGTGCCCCTGGAAATTGAAACATACGGATCCTTCTGTAAAG
AATGGACGGCCAGCTGTCAGCAGCGCCCCTGTGGAGCAAGAATGACCAAT
AGGTTAGCCCCAGCTCGTGGGTCGGCCCCCCAGGGCGCATTGTTGGACAA
CTGAGAAGGTAGATCTGCAGTATGGCACCTGTTTAGCCGCACGCAATCGC
ACAGTGAGGTCCGTTTCTCGCCATCAAAGTCGCCGTGCTCACGGGCGCGA
TGCCTTGTTGCCTTGGGACAATCGGCACGCATTCGGATTTACTCATACTC
CGTCCCAGCGACTCTGGAAGACCATGGCAATGCGAGAGCTGCTTTTCCGC
TTACTAGCGTCTCATAGTAAGTATCCTTGTCACGACACATAAGGTGCGTC
TTTCTTGCGCTGTTATTCTTGTATCGGACAATGCTAACTCAGCAGATAGC
GGCTGTTGCAATTGAGGTTGAGGAGCGTAGGACGGCAATGTTTCTTAGTC
AGCACCTTGAAGGCTCTTCGGTGATCGTCTACAGGCTCAATGGTACTGGT
TTCCTCTTGCTGCCGATAGAGCCGGGCTGCAACCGATACGGTTCCTTCTC
CTGGAGTTGCAACTCCACTGCGCCGTTTGTCAGTCCGCAATCTGTTGCTC
AACTTTCGTGTATGACCCCTCCAGAGTAGGCAGTGGTCGCTGCTTTCCCA
TGCGTGACGGAAGGAAAAGGGCGCGGATTGGAAGCGGGCTTTTGACACCC
ATCTGGTCACAAGGTCCTTTCGCTCCGCTGGCTAAGGATCTTGACAAGTT
GCATTGTTTCTACCCATCGTT
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Coding sequence (CDS) from alignment at ch3:926046..928116+

>KJC3_003127-T2 ID=KJC3_003127-T2|Name=KJC3_003127-T2|organism=Aspergillus niger KJC3|type=CDS|length=1344bp|location=Sequence derived from alignment at ch3:926046..928116+ (Aspergillus niger KJC3)
ATGATTTATAGCATGCGAGAGGATGGGAAGTTCTCAGATCTCGCGGTCAA
ATGCCAATCTTCAACCTTCCACGTTCATTGTTGCATTGTGTGCCCACAGT
CGCCATTTTTCGACAAGGCGGCAAATGGTAATTTCGAGGAATCTGAATCC
CGCGTCATCAACATTCACGATGACCCTTTCATCGTATCCAAGTTGTTTGA
TTTTCTTTACCGTGCGGACTACGATGACTCACCTGACAATACGGATGATC
CAGCTGCGGATAATGAATCTGCTGCGAACGAAGAGGAAATATTACCGACA
GAGCGTATCTCCCAAGATGCTCTTTCAAGGCAGTGGAGGCGTGCACAGAC
CAATGTGCAAATCTATATTATAGCCGATAAGTATATGATTGAAGGATTGA
AAGATATATCCAAAAGAAAGTTGAATTCCAACATGGAAAATAACTGGGAC
GACTGCGGATTTCTCACGGTTGTCAGCGATGTGTATGGGTCTCAGTGTCC
GCCAAGATCAGACCTACGTGAAATTATCATACGCTTTGCTCTTCGACATC
TCGGTACGCTTCAGAAATTCCGGCAGTTTGATGACGCTCGAAAAGAATAC
CCCGAGTTTGTGTATGAACTGTCCACGGCTTTGATAGAACGAGTTGTCGA
ATTGGAAAAGAGAACATGGTAGATGATTTATAGCATGCGAGAGGATGGGA
AGTTCTCAGATCTCGCGGTCAAATGCCAATCTTCAACCTTCCACGTTCAT
TGTTGCATTGTGTGCCCACAGTCGCCATTTTTCGACAAGGCGGCAAATGG
TAATTTCGAGGAATCTGAATCCCGCGTCATCAACATTCACGATGACCCTT
TCATCGTATCCAAGTTGTTTGATTTTCTTTACCGTGCGGACTACGATGAC
TCACCTGACAATACGGATGATCCAGCTGCGGATAATGAATCTGCTGCGAA
CGAAGAGGAAATATTACCGACAGAGCGTATCTCCCAAGATGCTCTTTCAA
GGCAGTGGAGGCGTGCACAGACCAATGTGCAAATCTATATTATAGCCGAT
AAGTATATGATTGAAGGATTGAAAGATATATCCAAAAGAAAGTTGAATTC
CAACATGGAAAATAACTGGGACGACTGCGGATTTCTCACGGTTGTCAGCG
ATGTGTATGGGTCTCAGTGTCCGCCAAGATCAGACCTACGTGAAATTATC
ATACGCTTTGCTCTTCGACATCTCGGTACGCTTCAGAAATTCCGGCAGTT
TGATGACGCTCGAAAAGAATACCCCGAGTTTGTGTATGAACTGTCCACGG
CTTTGATAGAACGAGTTGTCGAATTGGAAAAGAGAACATGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003127KJC3_003127Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003127-T2.utr5p1KJC3_003127-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003127-T2.exon1KJC3_003127-T2.exon1Aspergillus niger KJC3exon
KJC3_003127-T2.exon2KJC3_003127-T2.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003127-T2.cdsKJC3_003127-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003127-T2.utr3p1KJC3_003127-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003127-T2KJC3_003127-T2-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011333
DBxrefInterPro:IPR000210
DBxrefPFAM:PF00651
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:926046..928116 +
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