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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:991238..992546+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003135-T1 ID=KJC3_003135-T1|Name=KJC3_003135-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1309bp|location=Sequence derived from alignment at ch3:991238..992546+ (Aspergillus niger KJC3)
GCATCCCACAAACTCTCCTCTCCTGCTTCGACATGCCCAGGAAAATGTCT
AGACTCGAAAGGAGCTTCAATACCCAAAGTATGGTTCTCCAGAAGTCAAA
AATAAAATATTTATGTCCAAAGTGCCTCCAAGGTTTCTCCCGCTCCGACG
TTTTATACCAGCATTTCCGACAGAAGGCAGATGCAATCCATAAAGGGCTT
GATTCGAATAAAAGCAATTTCGCACTGTTCCTTTCAAGCTATCAGGGATG
TATGGGAGCTCTGATTCCAGCTGCAAAGCTACCAAAAGCGCCAGATTGTT
TTGATGTTTTTTTTGTGATTGAACACTATGGCGAAGAAACAGAAAGCCCA
AACATATCAGATTATGGTATGCAGTCTATATATATGTCCCAGTCCATGGA
CAATTCCCTTTACTAAAACAAGCATGCTTCAAGCCCAGTCCTATACGTCT
ACACCTTCTATGCATTCCCACAGCTGCAACTTTTCTGTTCCGCTTTACCA
TGATCGCCAGCCGCGTGGCTATGATCATGATTCACATGGAGGTACTGCAT
TGAGTACCGTGCCTGGTGAGGATCTGACTACTGTTTAGAGCGACTGCCAG
TTTGCTAAATATTACCGACAAAGTGCCTAAGCAGCATGTACGACACCTGC
AAATACTTCACGATGTAGAAGTGGAGGCTAAGATCTGTGCACTTCTACCT
CAAATGGATAACTGGTTAGATGGGACTTTGCCTCTTTCGGATCAGCCCCA
TCATGATTTTGGCGTTATTGTTCCGTCTGTGGATGTCAATAGGCCATTGA
TCCCAGTCCGAGACCTGCTATACAAAGGGGTAAGTTTCTAAAATATGTTT
GGTAAGTGTTCGTCGCTCATCATCAATAGTTCGGAACATTCACCCTCATA
CGCACATTCAAGGATGTTTTCTCGCCTCAAAACATCCCCGAGGCTGTCTA
TACGGTGCTCAGAGTAGACGGGCCGGGCCTAATCGGCAACCAGAAAGTGG
CCATAGGCGAGTCAATCTGGGTTAGCCATCAGACAACCTTATCCGCTGGT
CTGATCCTTCTGATTGGCGTTTTCCCAACGGTAGTAGTTGGACAGAAGGT
CTAGCACACAGATTGTCGCGGTGTACTTAATGTGGGAGAATTTACACATG
GATTGTTGTCATTGCGGGTGCGGGCTGGCTTGGTTGAAGGGGCTTCATTT
TGATTAATCATCACAGAGCGACAATCTGATCACAGTTATCTTCAGACCAA
TGCACGGTCGCATACAGGATAGTCTTGGCACGGACGTACATAGGATGGAG
ATATGCCCG back to topCoding sequence (CDS) from alignment at ch3:991238..992546+ >KJC3_003135-T1 ID=KJC3_003135-T1|Name=KJC3_003135-T1|organism=Aspergillus niger KJC3|type=CDS|length=4245bp|location=Sequence derived from alignment at ch3:991238..992546+ (Aspergillus niger KJC3)
ATGCCCAGGAAAATGTCTAGACTCGAAAGGAGCTTCAATACCCAAAGTAT
GGTTCTCCAGAAGTCAAAAATAAAATATTTATGTCCAAAGTGCCTCCAAG
ATGCAATCCATAAAGGGCTTGATTCGAATAAAAGCAATTTCGCACTGTTC
CTTTCAAGCTATCAGGGATGTATGGGAGCTCTGATTCCAGCTGCAAAGCT
ACCAAAAGCGCCAGATTGTTTTGATGTTTTTTTTGTGATTGAACACTATG
GCGAAGAAACAGAAAGCCCAAACATATCAGATTATGCCCAGTCCTATACG
TCTACACCTTCTATGCATTCCCACAGCTGCAACTTTTCTGTTCCGCTTTA
CCATGATCGCCAGCCGCGTGGCTATGATCATGATTCACATGGAGGTACTG
CATTGAGTACCGTGCCTGTGCCTAAGCAGCATGTACGACACCTGCAAATA
CTTCACGATGTAGAAGTGGAGGCTAAGATCTGTGCACTTCTACCTCAAAT
GGATAACTGGTTAGATGGGACTTTGCCTCTTTCGGATCAGCCCCATCATG
ATTTTGGCGTTATTGTTCCGTCTGTGGATGTCAATAGGCCATTGATCCCA
GTCCGAGACCTGCTATACAAAGGGTTCGGAACATTCACCCTCATACGCAC
ATTCAAGGATGTTTTCTCGCCTCAAAACATCCCCGAGGCTGTCTATACGG
TGCTCAGAGTAGACGGGCCGGGCCTAATCGGCAACCAGAAAGTGGCCATA
GGCGAGTCAATCTGGGTTAGCCATCAGACAACCTTATCCGCTGGTCTGAT
CCTTCTGATTGGCGTTTTCCCAACGGTAGTAGTTGGACAGAAGGTCTAGA
TGCCCAGGAAAATGTCTAGACTCGAAAGGAGCTTCAATACCCAAAGTATG
GTTCTCCAGAAGTCAAAAATAAAATATTTATGTCCAAAGTGCCTCCAAGA
TGCAATCCATAAAGGGCTTGATTCGAATAAAAGCAATTTCGCACTGTTCC
TTTCAAGCTATCAGGGATGTATGGGAGCTCTGATTCCAGCTGCAAAGCTA
CCAAAAGCGCCAGATTGTTTTGATGTTTTTTTTGTGATTGAACACTATGG
CGAAGAAACAGAAAGCCCAAACATATCAGATTATGCCCAGTCCTATACGT
CTACACCTTCTATGCATTCCCACAGCTGCAACTTTTCTGTTCCGCTTTAC
CATGATCGCCAGCCGCGTGGCTATGATCATGATTCACATGGAGGTACTGC
ATTGAGTACCGTGCCTGTGCCTAAGCAGCATGTACGACACCTGCAAATAC
TTCACGATGTAGAAGTGGAGGCTAAGATCTGTGCACTTCTACCTCAAATG
GATAACTGGTTAGATGGGACTTTGCCTCTTTCGGATCAGCCCCATCATGA
TTTTGGCGTTATTGTTCCGTCTGTGGATGTCAATAGGCCATTGATCCCAG
TCCGAGACCTGCTATACAAAGGGTTCGGAACATTCACCCTCATACGCACA
TTCAAGGATGTTTTCTCGCCTCAAAACATCCCCGAGGCTGTCTATACGGT
GCTCAGAGTAGACGGGCCGGGCCTAATCGGCAACCAGAAAGTGGCCATAG
GCGAGTCAATCTGGGTTAGCCATCAGACAACCTTATCCGCTGGTCTGATC
CTTCTGATTGGCGTTTTCCCAACGGTAGTAGTTGGACAGAAGGTCTAGAT
GCCCAGGAAAATGTCTAGACTCGAAAGGAGCTTCAATACCCAAAGTATGG
TTCTCCAGAAGTCAAAAATAAAATATTTATGTCCAAAGTGCCTCCAAGAT
GCAATCCATAAAGGGCTTGATTCGAATAAAAGCAATTTCGCACTGTTCCT
TTCAAGCTATCAGGGATGTATGGGAGCTCTGATTCCAGCTGCAAAGCTAC
CAAAAGCGCCAGATTGTTTTGATGTTTTTTTTGTGATTGAACACTATGGC
GAAGAAACAGAAAGCCCAAACATATCAGATTATGCCCAGTCCTATACGTC
TACACCTTCTATGCATTCCCACAGCTGCAACTTTTCTGTTCCGCTTTACC
ATGATCGCCAGCCGCGTGGCTATGATCATGATTCACATGGAGGTACTGCA
TTGAGTACCGTGCCTGTGCCTAAGCAGCATGTACGACACCTGCAAATACT
TCACGATGTAGAAGTGGAGGCTAAGATCTGTGCACTTCTACCTCAAATGG
ATAACTGGTTAGATGGGACTTTGCCTCTTTCGGATCAGCCCCATCATGAT
TTTGGCGTTATTGTTCCGTCTGTGGATGTCAATAGGCCATTGATCCCAGT
CCGAGACCTGCTATACAAAGGGTTCGGAACATTCACCCTCATACGCACAT
TCAAGGATGTTTTCTCGCCTCAAAACATCCCCGAGGCTGTCTATACGGTG
CTCAGAGTAGACGGGCCGGGCCTAATCGGCAACCAGAAAGTGGCCATAGG
CGAGTCAATCTGGGTTAGCCATCAGACAACCTTATCCGCTGGTCTGATCC
TTCTGATTGGCGTTTTCCCAACGGTAGTAGTTGGACAGAAGGTCTAGATG
CCCAGGAAAATGTCTAGACTCGAAAGGAGCTTCAATACCCAAAGTATGGT
TCTCCAGAAGTCAAAAATAAAATATTTATGTCCAAAGTGCCTCCAAGATG
CAATCCATAAAGGGCTTGATTCGAATAAAAGCAATTTCGCACTGTTCCTT
TCAAGCTATCAGGGATGTATGGGAGCTCTGATTCCAGCTGCAAAGCTACC
AAAAGCGCCAGATTGTTTTGATGTTTTTTTTGTGATTGAACACTATGGCG
AAGAAACAGAAAGCCCAAACATATCAGATTATGCCCAGTCCTATACGTCT
ACACCTTCTATGCATTCCCACAGCTGCAACTTTTCTGTTCCGCTTTACCA
TGATCGCCAGCCGCGTGGCTATGATCATGATTCACATGGAGGTACTGCAT
TGAGTACCGTGCCTGTGCCTAAGCAGCATGTACGACACCTGCAAATACTT
CACGATGTAGAAGTGGAGGCTAAGATCTGTGCACTTCTACCTCAAATGGA
TAACTGGTTAGATGGGACTTTGCCTCTTTCGGATCAGCCCCATCATGATT
TTGGCGTTATTGTTCCGTCTGTGGATGTCAATAGGCCATTGATCCCAGTC
CGAGACCTGCTATACAAAGGGTTCGGAACATTCACCCTCATACGCACATT
CAAGGATGTTTTCTCGCCTCAAAACATCCCCGAGGCTGTCTATACGGTGC
TCAGAGTAGACGGGCCGGGCCTAATCGGCAACCAGAAAGTGGCCATAGGC
GAGTCAATCTGGGTTAGCCATCAGACAACCTTATCCGCTGGTCTGATCCT
TCTGATTGGCGTTTTCCCAACGGTAGTAGTTGGACAGAAGGTCTAGATGC
CCAGGAAAATGTCTAGACTCGAAAGGAGCTTCAATACCCAAAGTATGGTT
CTCCAGAAGTCAAAAATAAAATATTTATGTCCAAAGTGCCTCCAAGATGC
AATCCATAAAGGGCTTGATTCGAATAAAAGCAATTTCGCACTGTTCCTTT
CAAGCTATCAGGGATGTATGGGAGCTCTGATTCCAGCTGCAAAGCTACCA
AAAGCGCCAGATTGTTTTGATGTTTTTTTTGTGATTGAACACTATGGCGA
AGAAACAGAAAGCCCAAACATATCAGATTATGCCCAGTCCTATACGTCTA
CACCTTCTATGCATTCCCACAGCTGCAACTTTTCTGTTCCGCTTTACCAT
GATCGCCAGCCGCGTGGCTATGATCATGATTCACATGGAGGTACTGCATT
GAGTACCGTGCCTGTGCCTAAGCAGCATGTACGACACCTGCAAATACTTC
ACGATGTAGAAGTGGAGGCTAAGATCTGTGCACTTCTACCTCAAATGGAT
AACTGGTTAGATGGGACTTTGCCTCTTTCGGATCAGCCCCATCATGATTT
TGGCGTTATTGTTCCGTCTGTGGATGTCAATAGGCCATTGATCCCAGTCC
GAGACCTGCTATACAAAGGGTTCGGAACATTCACCCTCATACGCACATTC
AAGGATGTTTTCTCGCCTCAAAACATCCCCGAGGCTGTCTATACGGTGCT
CAGAGTAGACGGGCCGGGCCTAATCGGCAACCAGAAAGTGGCCATAGGCG
AGTCAATCTGGGTTAGCCATCAGACAACCTTATCCGCTGGTCTGATCCTT
CTGATTGGCGTTTTCCCAACGGTAGTAGTTGGACAGAAGGTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003135-T1.utr5p1 | KJC3_003135-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003135-T1.utr3p1 | KJC3_003135-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:991238..992546 + |
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