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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1064444..1065620- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003141-T1 ID=KJC3_003141-T1|Name=KJC3_003141-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1177bp|location=Sequence derived from alignment at ch3:1064444..1065620- (Aspergillus niger KJC3)
CAACAATAATCTTTTCTTTTATTTTCTATAGGATCCACCTTCTCCTATCT
GAATAGATCCACGAGCCCTTGATGAAGAAAGGAGGAAAAAAGAAAAGAAA
GTCGGCAGTATCTACCTCCGCTGATACAGCTGTTGTACCTACGGAGCCTG
TTTCTGCAAACGAACAAATTATCAGAAAAATGAAAGACCTGGTCCTTAGG
TTAGATACTACGGTTAGTAATCTTATCTCGTACAATTACTGATATCCAAA
TTAGTCAATTTCTCAATCCGAAGTACAGCGATTTGTCCATTAGTTGTGGT
GATGAAGTCTTTCCAGCCCATCGGAACATTCTCTGTCCCCAATCAAAGTA
TTTTGAGGTCGTTTGTAGTAGTCGCTTTAAGGTGAGATACTTGTCATACT
CCAGTTCTTTTCGGGTGCAATCATGAAATTGATATAGAAACTCGTAGGAA
AGCAACGGCGAGATCATCATCGAGAATTGTAATCCTGTGCTCATCAAAAA
GACACTCGAATTCTTGTACACGGGCGACTATACTTATGACGGTGCTCCAA
TTACCCAAGCCCACCTGAACTCGAAGAACAGTTCTGAATGTTCGCCCGAA
ACATGGGCAGAAAATAATTTTGAGCTAGATGCAGACACTGAACAATATCC
AAACCCATCACGAAAAACCAATTCTACTGATTCCCAAAATTGTCAGGCCT
TCTTCCACGCTCAAATGTACGCACAAGGTGATTATTTTCAGATCAACGAG
CTTAAGAAGAAAGCAAAGGATTACTTTATGAAATCTTTCCTGGAACATCC
CGACCAAGATTCATTCAGCTCCTCCGTCGTTGAAGTTTACAGTTCAACAG
GGGAGCACGACCGTGGGCTCAGAGATCTTGTTGTCCAGCTCACGACGGAT
AACCTCAAGATTCTGAGGAATGGGGATAATCCTATACTCTGTGACGGACT
TTTAGAGTCTGTTCCCAAATTTATGCTGGAGGTCTGTCTTTCGACCTTGG
ACAAGTGTGCTGAATATCAGAGGCAGCGGTATGGATACTACTAGAATGTT
CATTGTAATGCACGGAAGGGTCTCGAATAATGTGCAGCTGCTCAACTTTT
TGTTTGATATTCTACTTTATCTGTTTATAGTGAGACAATGCAGGGCTTCA
AGTACCAAAGAGGAGTGAGTAACGGTG back to topCoding sequence (CDS) from alignment at ch3:1064444..1065620- >KJC3_003141-T1 ID=KJC3_003141-T1|Name=KJC3_003141-T1|organism=Aspergillus niger KJC3|type=CDS|length=2556bp|location=Sequence derived from alignment at ch3:1064444..1065620- (Aspergillus niger KJC3)
GAAAGCAACGGCGAGATCATCATCGAGAATTGTAATCCTGTGCTCATCAA
AAAGACACTCGAATTCTTGTACACGGGCGACTATACTTATGACGGTGCTC
CAATTACCCAAGCCCACCTGAACTCGAAGAACAGTTCTGAATGTTCGCCC
GAAACATGGGCAGAAAATAATTTTGAGCTAGATGCAGACACTGAACAATA
TCCAAACCCATCACGAAAAACCAATTCTACTGATTCCCAAAATTGTCAGG
CCTTCTTCCACGCTCAAATGTACGCACAAGGTGATTATTTTCAGATCAAC
GAGCTTAAGAAGAAAGCAAAGGATTACTTTATGAAATCTTTCCTGGAACA
TCCCGACCAAGATTCATTCAGCTCCTCCGTCGTTGAAGTTTACAGTTCAA
CAGGGGAGCACGACCGTGGGCTCAGAGATCTTGTTGTCCAGCTCACGACG
GATAACCTCAAGATTCTGAGGAATGGGGATAATCCTATACTCTGTGACGG
ACTTTTAGAGTCTGTTCCCAAATTTATGCTGGAGGTCTGTCTTTCGACCT
TGGACAAGTGTGCTGAATATCAGAGGCAGCGGTATGGATACTACTAGTCA
ATTTCTCAATCCGAAGTACAGCGATTTGTCCATTAGTTGTGGTGATGAAG
TCTTTCCAGCCCATCGGAACATTCTCTGTCCCCAATCAAAGTATTTTGAG
GTCGTTTGTAGTAGTCGCTTTAAGATGAAGAAAGGAGGAAAAAAGAAAAG
AAAGTCGGCAGTATCTACCTCCGCTGATACAGCTGTTGTACCTACGGAGC
CTGTTTCTGCAAACGAACAAATTATCAGAAAAATGAAAGACCTGGTCCTT
AGGAAAGCAACGGCGAGATCATCATCGAGAATTGTAATCCTGTGCTCATC
AAAAAGACACTCGAATTCTTGTACACGGGCGACTATACTTATGACGGTGC
TCCAATTACCCAAGCCCACCTGAACTCGAAGAACAGTTCTGAATGTTCGC
CCGAAACATGGGCAGAAAATAATTTTGAGCTAGATGCAGACACTGAACAA
TATCCAAACCCATCACGAAAAACCAATTCTACTGATTCCCAAAATTGTCA
GGCCTTCTTCCACGCTCAAATGTACGCACAAGGTGATTATTTTCAGATCA
ACGAGCTTAAGAAGAAAGCAAAGGATTACTTTATGAAATCTTTCCTGGAA
CATCCCGACCAAGATTCATTCAGCTCCTCCGTCGTTGAAGTTTACAGTTC
AACAGGGGAGCACGACCGTGGGCTCAGAGATCTTGTTGTCCAGCTCACGA
CGGATAACCTCAAGATTCTGAGGAATGGGGATAATCCTATACTCTGTGAC
GGACTTTTAGAGTCTGTTCCCAAATTTATGCTGGAGGTCTGTCTTTCGAC
CTTGGACAAGTGTGCTGAATATCAGAGGCAGCGGTATGGATACTACTAGT
CAATTTCTCAATCCGAAGTACAGCGATTTGTCCATTAGTTGTGGTGATGA
AGTCTTTCCAGCCCATCGGAACATTCTCTGTCCCCAATCAAAGTATTTTG
AGGTCGTTTGTAGTAGTCGCTTTAAGATGAAGAAAGGAGGAAAAAAGAAA
AGAAAGTCGGCAGTATCTACCTCCGCTGATACAGCTGTTGTACCTACGGA
GCCTGTTTCTGCAAACGAACAAATTATCAGAAAAATGAAAGACCTGGTCC
TTAGGAAAGCAACGGCGAGATCATCATCGAGAATTGTAATCCTGTGCTCA
TCAAAAAGACACTCGAATTCTTGTACACGGGCGACTATACTTATGACGGT
GCTCCAATTACCCAAGCCCACCTGAACTCGAAGAACAGTTCTGAATGTTC
GCCCGAAACATGGGCAGAAAATAATTTTGAGCTAGATGCAGACACTGAAC
AATATCCAAACCCATCACGAAAAACCAATTCTACTGATTCCCAAAATTGT
CAGGCCTTCTTCCACGCTCAAATGTACGCACAAGGTGATTATTTTCAGAT
CAACGAGCTTAAGAAGAAAGCAAAGGATTACTTTATGAAATCTTTCCTGG
AACATCCCGACCAAGATTCATTCAGCTCCTCCGTCGTTGAAGTTTACAGT
TCAACAGGGGAGCACGACCGTGGGCTCAGAGATCTTGTTGTCCAGCTCAC
GACGGATAACCTCAAGATTCTGAGGAATGGGGATAATCCTATACTCTGTG
ACGGACTTTTAGAGTCTGTTCCCAAATTTATGCTGGAGGTCTGTCTTTCG
ACCTTGGACAAGTGTGCTGAATATCAGAGGCAGCGGTATGGATACTACTA
GTCAATTTCTCAATCCGAAGTACAGCGATTTGTCCATTAGTTGTGGTGAT
GAAGTCTTTCCAGCCCATCGGAACATTCTCTGTCCCCAATCAAAGTATTT
TGAGGTCGTTTGTAGTAGTCGCTTTAAGATGAAGAAAGGAGGAAAAAAGA
AAAGAAAGTCGGCAGTATCTACCTCCGCTGATACAGCTGTTGTACCTACG
GAGCCTGTTTCTGCAAACGAACAAATTATCAGAAAAATGAAAGACCTGGT
CCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003141-T1.utr3p1 | KJC3_003141-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003141-T1.utr5p1 | KJC3_003141-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011333 |
| DBxref | InterPro:IPR000210 |
| DBxref | PFAM:PF00651 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1064444..1065620 - |
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