You are here

Home

KJC3_003148-T1, KJC3_003148-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003148-T1
Unique NameKJC3_003148-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1089196..1089755+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003148-T1 ID=KJC3_003148-T1|Name=KJC3_003148-T1|organism=Aspergillus niger KJC3|type=mRNA|length=560bp|location=Sequence derived from alignment at ch3:1089196..1089755+ (Aspergillus niger KJC3)
ATGACCTCCCTCCACGACTCCTCGAGACCTTTCGCCCATGTTTCGCCTCT
TTTATCGAAATTTGAAACAATCATGGTAAGTGGTTACCCTTATTCACATA
ACTTCACTAATGCCAATGGATAAGGCTCCCCACACTCTACTTCCGGAAGC
GATCCTGGTATTCCCGGCTCAATCAACCGTCAAGGCGGTACATATTTATT
TTCTGGGATTGATATACGGCTCGAATTTCGTGAACATATCCCGCTTGGAT
CAAAATGAAACGGTCTGTCGACATGTAGGAAGAGATCTCCAGCGACCTCA
CTCCAGACGCCTTACTAAAGCTGTCTCTCCTCACGTGGCATTTTGATGCA
AGAGGCGATTTCTCCCAAGAGCTCCTTCAATTCATTACCGAACTGGATGA
GTTTGAGGAAGTATGCCAGGTTATCTGGGAGCGGTATAGCGATCATTCGG
AGCATTATGTGTCATGCAAAGTCTTCACGGTTGAGATGCTAAGACTGATA
CGTTTTCTTGAAGGGTATGTTGCCAGAAGTTGGACCGAAACATGTGGTAG
GAGTGGCTAG
back to top

Coding sequence (CDS) from alignment at ch3:1089196..1089755+

>KJC3_003148-T1 ID=KJC3_003148-T1|Name=KJC3_003148-T1|organism=Aspergillus niger KJC3|type=CDS|length=1260bp|location=Sequence derived from alignment at ch3:1089196..1089755+ (Aspergillus niger KJC3)
ATGACCTCCCTCCACGACTCCTCGAGACCTTTCGCCCATGTTTCGCCTCT
TTTATCGAAATTTGAAACAATCATGGCTCCCCACACTCTACTTCCGGAAG
CGATCCTGGTATTCCCGGCTCAATCAACCGTCAAGGCGGAAGAGATCTCC
AGCGACCTCACTCCAGACGCCTTACTAAAGCTGTCTCTCCTCACGTGGCA
TTTTGATGCAAGAGGCGATTTCTCCCAAGAGCTCCTTCAATTCATTACCG
AACTGGATGAGTTTGAGGAAGTATGCCAGGTTATCTGGGAGCGGTATAGC
GATCATTCGGAGCATTATGTGTCATGCAAAGTCTTCACGGTTGAGATGCT
AAGACTGATACGTTTTCTTGAAGGGTATGTTGCCAGAAGTTGGACCGAAA
CATGTGGTAGGAGTGGCTAGATGACCTCCCTCCACGACTCCTCGAGACCT
TTCGCCCATGTTTCGCCTCTTTTATCGAAATTTGAAACAATCATGGCTCC
CCACACTCTACTTCCGGAAGCGATCCTGGTATTCCCGGCTCAATCAACCG
TCAAGGCGGAAGAGATCTCCAGCGACCTCACTCCAGACGCCTTACTAAAG
CTGTCTCTCCTCACGTGGCATTTTGATGCAAGAGGCGATTTCTCCCAAGA
GCTCCTTCAATTCATTACCGAACTGGATGAGTTTGAGGAAGTATGCCAGG
TTATCTGGGAGCGGTATAGCGATCATTCGGAGCATTATGTGTCATGCAAA
GTCTTCACGGTTGAGATGCTAAGACTGATACGTTTTCTTGAAGGGTATGT
TGCCAGAAGTTGGACCGAAACATGTGGTAGGAGTGGCTAGATGACCTCCC
TCCACGACTCCTCGAGACCTTTCGCCCATGTTTCGCCTCTTTTATCGAAA
TTTGAAACAATCATGGCTCCCCACACTCTACTTCCGGAAGCGATCCTGGT
ATTCCCGGCTCAATCAACCGTCAAGGCGGAAGAGATCTCCAGCGACCTCA
CTCCAGACGCCTTACTAAAGCTGTCTCTCCTCACGTGGCATTTTGATGCA
AGAGGCGATTTCTCCCAAGAGCTCCTTCAATTCATTACCGAACTGGATGA
GTTTGAGGAAGTATGCCAGGTTATCTGGGAGCGGTATAGCGATCATTCGG
AGCATTATGTGTCATGCAAAGTCTTCACGGTTGAGATGCTAAGACTGATA
CGTTTTCTTGAAGGGTATGTTGCCAGAAGTTGGACCGAAACATGTGGTAG
GAGTGGCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003148KJC3_003148Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003148-T1.exon1KJC3_003148-T1.exon1Aspergillus niger KJC3exon
KJC3_003148-T1.exon2KJC3_003148-T1.exon2Aspergillus niger KJC3exon
KJC3_003148-T1.exon3KJC3_003148-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003148-T1.cdsKJC3_003148-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003148-T1KJC3_003148-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1089196..1089755 +
Powered by Drupal