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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1093768..1095580- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003149-T1 ID=KJC3_003149-T1|Name=KJC3_003149-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1813bp|location=Sequence derived from alignment at ch3:1093768..1095580- (Aspergillus niger KJC3)
AGCGCTGAAGACTAGGCATTCACATAATTCGTTTGAACTGGCAATTTTTC
TGACGAGTGCGATTCCGGATCTTTCCGTAACTGACCCCTCCGTCCTATGT
TACACTGACACGTTGCAGGGTGGGTATTCCGAAGGCTCCGCACTCTCCAT
ACCTTTGCCTGGTATTTTCGACTGAATCTCGACATATTTTTGACTGAATC
TCGACATATTTTTGACTGATTATCCCCGTACATACGCTTGCGTTTTCAGC
ACTCAACCTACCAAAGGCTACCACACATCTGAAATGGCCCCTTTAACTCT
CGAGGACGCTCGTGCAAAGCTGCGAGAGGCATCCAAGGACATCCAGCGTC
GCGATGGACTGAAGGATTCCGAAGCCAAACGCGTAAGGGAAGCTGTCTCG
CTTCTCCAAGCCGGACTTCCAGATTCAGAAGTGAAAGTCTCGAAGCGTCA
ATCAAGATATCGAGGATTTTTGCAGAAAGTGCAAGGTGAAAACCCAGACA
ACGGGGATTCTATGGTAGTTCTTTGCGCCGTTGCCCTTGGGATATCAGTT
ATCGCCATTGCGAGGGATACAATACTGCTTAACTTGCCATTCACGATGAA
AGATGAGGCTGAACAACTTCTGCACCCTTGCCTTCACCGCCTTGCAAATC
AATACTTTGGCGCCTCCAATGCTCCGAGTAAGTAGTTGAAAACGATAACT
CAAGGGAATATCTTCTGATTTGACACTAAATTGAACAGGTTCTTCCCCTG
CAGCTGAACAACTACTGACAGCGCAAGGTTCGAGGCGTAAGTTATCTGAA
TTGAATATCCTTGTATAGCACTAACAGAGCGAGATCAGAAATTGACTACA
GGTGTTCTGCTGCACCAATAACTCAAATGCACCACCTAGGCGATCTTCTC
TTCAACGCAGTAAAATGCAGCAGACAGTGGGAATGGGAGAGGAATGTCGG
CGGGGGCGGAATAAAGGCGACAACAGACTGTCTGAACGTATTAGTTCCGG
AGGACCGCAATCAAGATATCTCTATCACATTACTTGTCGGTCACGAACAG
GGCCTGGCGTTGATCGAAAAGTTCCGACTCACATCTATGTGAATTTCACC
GTTGCACCAATCACCCTAACCCTGAACCCAGCGGGAACCTTGCTTGACCC
TTCCTTAAGAGCGTCATTGTGCTGCCAGTACGGAGGCGAATCCATAGCCG
CTCGAGGGTCGTATACCATGATCGATTTCCCTCGGCCAGTTATGCTCCTT
TCGTGGTCGACTGGTTCGAAGAGTTTCACGTTTATGTATTCCTCGGATCC
GGCAAGTGCCTGAGAACCTACCTACACAGGCCACGGGCTTAGCTCTGGTA
CTGTCCTTGGTTTCAGAGTTTTGACTTACTTCAGACATCCTTGATACACG
CTCTCTTGATTAAGTTGAAGAGCAGAAAAAATTGATCTGGAGGTTTCGAG
AATTAAAAGTCGTGTGTGCTGCTCAGGCTGGATACGTATGACGTCGGCGG
AATAATGATGACTTCATGTTGAGTGGTGCTGGACGACGACCACATGTGCA
AAAATTTGATCAAATACCCACGCCAACGGTCGATGGGAGGGGGAATTAGG
TAACATTCACACGTGACACAATGTTGGGCAACGAAGTGCGCTTCAATGAC
CTAGCTTTTAAGTCCTTAAATTAGTTAACGGATTCGCTGCCACGTGATCG
TGTTGATTTGCAAGAGTAGTCACATGACTAACGCACATGACAAATTGTTC
GAAAACTGTAGGTTTCAAATTTTTGCGCTGTATATTGGGATAATTTAATC
GACTTTTCGTCGA back to topCoding sequence (CDS) from alignment at ch3:1093768..1095580- >KJC3_003149-T1 ID=KJC3_003149-T1|Name=KJC3_003149-T1|organism=Aspergillus niger KJC3|type=CDS|length=2088bp|location=Sequence derived from alignment at ch3:1093768..1095580- (Aspergillus niger KJC3)
AAATTGACTACAGGTGTTCTGCTGCACCAATAACTCAAATGCACCACCTA
GGCGATCTTCTCTTCAACGCAGTAAAATGCAGCAGACAGTGGGAATGGGA
GAGGAATGTCGGCGGGGGCGGAATAAAGGCGACAACAGACTGTCTGAACG
TATTAGTTCCGGAGGACCGCAATCAAGATATCTCTATCACATTACTTGTC
GGTCACGAACAGGGCCTGGCGTTGATCGAAAAGTTCCGACTCACATCTAT
GTGAGTTCTTCCCCTGCAGCTGAACAACTACTGACAGCGCAAGGTTCGAG
GCATGGCCCCTTTAACTCTCGAGGACGCTCGTGCAAAGCTGCGAGAGGCA
TCCAAGGACATCCAGCGTCGCGATGGACTGAAGGATTCCGAAGCCAAACG
CGTAAGGGAAGCTGTCTCGCTTCTCCAAGCCGGACTTCCAGATTCAGAAG
TGAAAGTCTCGAAGCGTCAATCAAGATATCGAGGATTTTTGCAGAAAGTG
CAAGGTGAAAACCCAGACAACGGGGATTCTATGGTAGTTCTTTGCGCCGT
TGCCCTTGGGATATCAGTTATCGCCATTGCGAGGGATACAATACTGCTTA
ACTTGCCATTCACGATGAAAGATGAGGCTGAACAACTTCTGCACCCTTGC
CTTCACCGCCTTGCAAATCAATACTTTGGCGCCTCCAATGCTCCGAAAAT
TGACTACAGGTGTTCTGCTGCACCAATAACTCAAATGCACCACCTAGGCG
ATCTTCTCTTCAACGCAGTAAAATGCAGCAGACAGTGGGAATGGGAGAGG
AATGTCGGCGGGGGCGGAATAAAGGCGACAACAGACTGTCTGAACGTATT
AGTTCCGGAGGACCGCAATCAAGATATCTCTATCACATTACTTGTCGGTC
ACGAACAGGGCCTGGCGTTGATCGAAAAGTTCCGACTCACATCTATGTGA
GTTCTTCCCCTGCAGCTGAACAACTACTGACAGCGCAAGGTTCGAGGCAT
GGCCCCTTTAACTCTCGAGGACGCTCGTGCAAAGCTGCGAGAGGCATCCA
AGGACATCCAGCGTCGCGATGGACTGAAGGATTCCGAAGCCAAACGCGTA
AGGGAAGCTGTCTCGCTTCTCCAAGCCGGACTTCCAGATTCAGAAGTGAA
AGTCTCGAAGCGTCAATCAAGATATCGAGGATTTTTGCAGAAAGTGCAAG
GTGAAAACCCAGACAACGGGGATTCTATGGTAGTTCTTTGCGCCGTTGCC
CTTGGGATATCAGTTATCGCCATTGCGAGGGATACAATACTGCTTAACTT
GCCATTCACGATGAAAGATGAGGCTGAACAACTTCTGCACCCTTGCCTTC
ACCGCCTTGCAAATCAATACTTTGGCGCCTCCAATGCTCCGAAAATTGAC
TACAGGTGTTCTGCTGCACCAATAACTCAAATGCACCACCTAGGCGATCT
TCTCTTCAACGCAGTAAAATGCAGCAGACAGTGGGAATGGGAGAGGAATG
TCGGCGGGGGCGGAATAAAGGCGACAACAGACTGTCTGAACGTATTAGTT
CCGGAGGACCGCAATCAAGATATCTCTATCACATTACTTGTCGGTCACGA
ACAGGGCCTGGCGTTGATCGAAAAGTTCCGACTCACATCTATGTGAGTTC
TTCCCCTGCAGCTGAACAACTACTGACAGCGCAAGGTTCGAGGCATGGCC
CCTTTAACTCTCGAGGACGCTCGTGCAAAGCTGCGAGAGGCATCCAAGGA
CATCCAGCGTCGCGATGGACTGAAGGATTCCGAAGCCAAACGCGTAAGGG
AAGCTGTCTCGCTTCTCCAAGCCGGACTTCCAGATTCAGAAGTGAAAGTC
TCGAAGCGTCAATCAAGATATCGAGGATTTTTGCAGAAAGTGCAAGGTGA
AAACCCAGACAACGGGGATTCTATGGTAGTTCTTTGCGCCGTTGCCCTTG
GGATATCAGTTATCGCCATTGCGAGGGATACAATACTGCTTAACTTGCCA
TTCACGATGAAAGATGAGGCTGAACAACTTCTGCACCCTTGCCTTCACCG
CCTTGCAAATCAATACTTTGGCGCCTCCAATGCTCCGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003149-T1.utr3p1 | KJC3_003149-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003149-T1.utr5p1 | KJC3_003149-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1093768..1095580 - |
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