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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1108627..1110815- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003155-T1 ID=KJC3_003155-T1|Name=KJC3_003155-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2189bp|location=Sequence derived from alignment at ch3:1108627..1110815- (Aspergillus niger KJC3)
CAGACGTGCATGAAACGTTCGCGCCAACCGATGGCGTGATTCGCGTTGAT
CCTGCCAACTCTTCCCCTCTTTCTCATCCCTTCAGCCTCATTAACATCCA
CTCATTAACCTGAACAACTCTCATTAATTGCCCTCCATGTCTCCCCACGA
TCGGTCGGAGGAGGAGGGTGTTCGCCGCCCACTCCTGGCCGATTCCAGAG
GGACCGATGGGACCGAACCCGGGGCGGAGTCTACTTCCGCATTGGGCCCC
AAGTTCACCCGCAACCTCGGAGCCATCGAGGCATTCGGCATCGTCATCAG
CATCGTGATCGGTAGTGGTATCTTCACTTCACCCGGTTCTATCGACACAA
ATGTTCCATCCCCTGGAGTCGCGCTTATCGTGTGGCTGGTCGGAGGCATT
CTGGCCTGGACCGGTGCTAGCACCATGGCCGAGCTCGGCACTGCTATTCC
GGGAGAAGGTCGGTTCACTCTGCTGCCATCAGATATATCGACAGGATTGA
CTGTACAACAGGAGGCGTGCAGCCATATCTTCGATACATCTATGGGGATG
TTTTTGGCTTTCTTGCTGCTTGGACTTGGATCATCGCCGTGATGCCTGCA
ACGCTGGCCATTTTGAGCATCGTGTTCATTGAAAGCATCTTCTCCGCGGC
TGGCGTCACTGACCAGGCTGGAAGCCTTTCGCATAAGCTGCTCTCCATTC
TTGTATTGTTGGTGATCGGAGTGGCCAACTCCATCAGTACCAAGGTCAGC
ACCCGATTGAATGGATTCTCCGTCACGACCAAATTCATCGCCATCGCCGC
AATTGTTGTGGCCGGCCTAGTCGTCGTCATCCTGCAAGTTTCGGGAATCA
ACCGCGATGCTGGGTCCAATGACTGGCTCAAGCACTCTTGGTTTGGATCT
AGGAACACTTGGACTCCAGACGGTCGGGAGATCGACTGGAGCTCCATGCA
CGGATGGGAATCGCTGGGTTACTATTCAACCGCACTCTACGGTGCTCTCT
GGGCCTATTCGGGCTGGGATAAGGTGAGCATATAGCCTCTTTCTGATATA
ATTCGTCAAAACGCTCACCATGTTTTGGCAGGCTATCTACGTCAGCGCAG
AGCTCTCTGCTCCTGCCCGTCAGCTTCCACTGGCCATCAACACTGCCATT
CCCATCATCATTCTTTGCTTCCTTGCCGCTAATGCCGCGTACTACATCCT
TCTTCCATGGAAGATCGTTTCAACTACTGATAGCGTGGCCGTCGTACGTA
AAACACCTTCCTATTGATGGCTTGTGCTAATAGGATACAGACCGCAATCA
CCCATCTTCTAGGACCAGCATGCGGTATCCTTGCTGCCATAGTGATCTGC
CTCGTGGTCGCCGGCTCCCTGCTCGGAAACTCCTTTGTGGCCGGTCGCAT
GATTGTCGCCGCATCAAAGCTGGATTGGTTTCCGCGGTTCCTGGGCGTGC
TCGGACATGTGGGAATGCCTCCTGACCCGGAGCCTCCTTCTCAGTCGACC
CCGCGATCGGATGCGCCCATAAATGCCACGATCATGGCCACTCTGCTACC
AATCCCGTACCTGCTGTTCGGAGATTTTCGCGCTCTACTCACCTTCAATG
GTCTGGGGGAATACTCGTTCTTCTTCTTGACCGTTTTGGGTGCCATTCTT
CTGCGATTCCGGCAGCCTGATCTCCATCGGCCGTACAAACCTTTCATTGC
AATTCCGCTGATATTTGCCCTTGTCAGTGGCTTTGTGGTGGTAAGGGGAG
CTGTTTTTGCGCCTCTCCAAGCGGTGATTCTGATTTCAGTCTGGATCATC
GGCATGGGGTTCTATTACCTCCGGGCTTACCTTCGAAGGGAAAGGGTGAC
TAGAAGAAGCGAGTAGACGGGTAGAAGTGGGTGCCCTGGCAGTTCCTACA
AAATTCGGGCACGCGTCTAGAGAAACTTTTCTCCTCGTCACAATTGGTTC
TTTAAGTCCTGATACACTATTTCAGCTGACACTTTCCAGACATGCGATGT
ACTTCATACAACACTGTGATTACATGACAAGGCTCCGTTGTGGAAACCGT
TATCCCTCATATTAATGCTGTGGGCATTAGGAAAGGGGGAAGGAACTGGA
GAATTCGATGTGCATAACTTTTGTCTGCGACGGCAGTAACAAATTTAAGT
TGATTAGAAGTTTTCGGTTGTGCAATCATGGTAAATGGC back to topCoding sequence (CDS) from alignment at ch3:1108627..1110815- >KJC3_003155-T1 ID=KJC3_003155-T1|Name=KJC3_003155-T1|organism=Aspergillus niger KJC3|type=CDS|length=6288bp|location=Sequence derived from alignment at ch3:1108627..1110815- (Aspergillus niger KJC3)
ACCGCAATCACCCATCTTCTAGGACCAGCATGCGGTATCCTTGCTGCCAT
AGTGATCTGCCTCGTGGTCGCCGGCTCCCTGCTCGGAAACTCCTTTGTGG
CCGGTCGCATGATTGTCGCCGCATCAAAGCTGGATTGGTTTCCGCGGTTC
CTGGGCGTGCTCGGACATGTGGGAATGCCTCCTGACCCGGAGCCTCCTTC
TCAGTCGACCCCGCGATCGGATGCGCCCATAAATGCCACGATCATGGCCA
CTCTGCTACCAATCCCGTACCTGCTGTTCGGAGATTTTCGCGCTCTACTC
ACCTTCAATGGTCTGGGGGAATACTCGTTCTTCTTCTTGACCGTTTTGGG
TGCCATTCTTCTGCGATTCCGGCAGCCTGATCTCCATCGGCCGTACAAAC
CTTTCATTGCAATTCCGCTGATATTTGCCCTTGTCAGTGGCTTTGTGGTG
GTAAGGGGAGCTGTTTTTGCGCCTCTCCAAGCGGTGATTCTGATTTCAGT
CTGGATCATCGGCATGGGGTTCTATTACCTCCGGGCTTACCTTCGAAGGG
AAAGGGTGACTAGAAGAAGCGAGTAGGCTATCTACGTCAGCGCAGAGCTC
TCTGCTCCTGCCCGTCAGCTTCCACTGGCCATCAACACTGCCATTCCCAT
CATCATTCTTTGCTTCCTTGCCGCTAATGCCGCGTACTACATCCTTCTTC
CATGGAAGATCGTTTCAACTACTGATAGCGTGGCCGTCGAGGCGTGCAGC
CATATCTTCGATACATCTATGGGGATGTTTTTGGCTTTCTTGCTGCTTGG
ACTTGGATCATCGCCGTGATGCCTGCAACGCTGGCCATTTTGAGCATCGT
GTTCATTGAAAGCATCTTCTCCGCGGCTGGCGTCACTGACCAGGCTGGAA
GCCTTTCGCATAAGCTGCTCTCCATTCTTGTATTGTTGGTGATCGGAGTG
GCCAACTCCATCAGTACCAAGGTCAGCACCCGATTGAATGGATTCTCCGT
CACGACCAAATTCATCGCCATCGCCGCAATTGTTGTGGCCGGCCTAGTCG
TCGTCATCCTGCAAGTTTCGGGAATCAACCGCGATGCTGGGTCCAATGAC
TGGCTCAAGCACTCTTGGTTTGGATCTAGGAACACTTGGACTCCAGACGG
TCGGGAGATCGACTGGAGCTCCATGCACGGATGGGAATCGCTGGGTTACT
ATTCAACCGCACTCTACGGTGCTCTCTGGGCCTATTCGGGCTGGGATAAG
ATGTCTCCCCACGATCGGTCGGAGGAGGAGGGTGTTCGCCGCCCACTCCT
GGCCGATTCCAGAGGGACCGATGGGACCGAACCCGGGGCGGAGTCTACTT
CCGCATTGGGCCCCAAGTTCACCCGCAACCTCGGAGCCATCGAGGCATTC
GGCATCGTCATCAGCATCGTGATCGGTAGTGGTATCTTCACTTCACCCGG
TTCTATCGACACAAATGTTCCATCCCCTGGAGTCGCGCTTATCGTGTGGC
TGGTCGGAGGCATTCTGGCCTGGACCGGTGCTAGCACCATGGCCGAGCTC
GGCACTGCTATTCCGGGAGAAGACCGCAATCACCCATCTTCTAGGACCAG
CATGCGGTATCCTTGCTGCCATAGTGATCTGCCTCGTGGTCGCCGGCTCC
CTGCTCGGAAACTCCTTTGTGGCCGGTCGCATGATTGTCGCCGCATCAAA
GCTGGATTGGTTTCCGCGGTTCCTGGGCGTGCTCGGACATGTGGGAATGC
CTCCTGACCCGGAGCCTCCTTCTCAGTCGACCCCGCGATCGGATGCGCCC
ATAAATGCCACGATCATGGCCACTCTGCTACCAATCCCGTACCTGCTGTT
CGGAGATTTTCGCGCTCTACTCACCTTCAATGGTCTGGGGGAATACTCGT
TCTTCTTCTTGACCGTTTTGGGTGCCATTCTTCTGCGATTCCGGCAGCCT
GATCTCCATCGGCCGTACAAACCTTTCATTGCAATTCCGCTGATATTTGC
CCTTGTCAGTGGCTTTGTGGTGGTAAGGGGAGCTGTTTTTGCGCCTCTCC
AAGCGGTGATTCTGATTTCAGTCTGGATCATCGGCATGGGGTTCTATTAC
CTCCGGGCTTACCTTCGAAGGGAAAGGGTGACTAGAAGAAGCGAGTAGGC
TATCTACGTCAGCGCAGAGCTCTCTGCTCCTGCCCGTCAGCTTCCACTGG
CCATCAACACTGCCATTCCCATCATCATTCTTTGCTTCCTTGCCGCTAAT
GCCGCGTACTACATCCTTCTTCCATGGAAGATCGTTTCAACTACTGATAG
CGTGGCCGTCGAGGCGTGCAGCCATATCTTCGATACATCTATGGGGATGT
TTTTGGCTTTCTTGCTGCTTGGACTTGGATCATCGCCGTGATGCCTGCAA
CGCTGGCCATTTTGAGCATCGTGTTCATTGAAAGCATCTTCTCCGCGGCT
GGCGTCACTGACCAGGCTGGAAGCCTTTCGCATAAGCTGCTCTCCATTCT
TGTATTGTTGGTGATCGGAGTGGCCAACTCCATCAGTACCAAGGTCAGCA
CCCGATTGAATGGATTCTCCGTCACGACCAAATTCATCGCCATCGCCGCA
ATTGTTGTGGCCGGCCTAGTCGTCGTCATCCTGCAAGTTTCGGGAATCAA
CCGCGATGCTGGGTCCAATGACTGGCTCAAGCACTCTTGGTTTGGATCTA
GGAACACTTGGACTCCAGACGGTCGGGAGATCGACTGGAGCTCCATGCAC
GGATGGGAATCGCTGGGTTACTATTCAACCGCACTCTACGGTGCTCTCTG
GGCCTATTCGGGCTGGGATAAGATGTCTCCCCACGATCGGTCGGAGGAGG
AGGGTGTTCGCCGCCCACTCCTGGCCGATTCCAGAGGGACCGATGGGACC
GAACCCGGGGCGGAGTCTACTTCCGCATTGGGCCCCAAGTTCACCCGCAA
CCTCGGAGCCATCGAGGCATTCGGCATCGTCATCAGCATCGTGATCGGTA
GTGGTATCTTCACTTCACCCGGTTCTATCGACACAAATGTTCCATCCCCT
GGAGTCGCGCTTATCGTGTGGCTGGTCGGAGGCATTCTGGCCTGGACCGG
TGCTAGCACCATGGCCGAGCTCGGCACTGCTATTCCGGGAGAAGACCGCA
ATCACCCATCTTCTAGGACCAGCATGCGGTATCCTTGCTGCCATAGTGAT
CTGCCTCGTGGTCGCCGGCTCCCTGCTCGGAAACTCCTTTGTGGCCGGTC
GCATGATTGTCGCCGCATCAAAGCTGGATTGGTTTCCGCGGTTCCTGGGC
GTGCTCGGACATGTGGGAATGCCTCCTGACCCGGAGCCTCCTTCTCAGTC
GACCCCGCGATCGGATGCGCCCATAAATGCCACGATCATGGCCACTCTGC
TACCAATCCCGTACCTGCTGTTCGGAGATTTTCGCGCTCTACTCACCTTC
AATGGTCTGGGGGAATACTCGTTCTTCTTCTTGACCGTTTTGGGTGCCAT
TCTTCTGCGATTCCGGCAGCCTGATCTCCATCGGCCGTACAAACCTTTCA
TTGCAATTCCGCTGATATTTGCCCTTGTCAGTGGCTTTGTGGTGGTAAGG
GGAGCTGTTTTTGCGCCTCTCCAAGCGGTGATTCTGATTTCAGTCTGGAT
CATCGGCATGGGGTTCTATTACCTCCGGGCTTACCTTCGAAGGGAAAGGG
TGACTAGAAGAAGCGAGTAGGCTATCTACGTCAGCGCAGAGCTCTCTGCT
CCTGCCCGTCAGCTTCCACTGGCCATCAACACTGCCATTCCCATCATCAT
TCTTTGCTTCCTTGCCGCTAATGCCGCGTACTACATCCTTCTTCCATGGA
AGATCGTTTCAACTACTGATAGCGTGGCCGTCGAGGCGTGCAGCCATATC
TTCGATACATCTATGGGGATGTTTTTGGCTTTCTTGCTGCTTGGACTTGG
ATCATCGCCGTGATGCCTGCAACGCTGGCCATTTTGAGCATCGTGTTCAT
TGAAAGCATCTTCTCCGCGGCTGGCGTCACTGACCAGGCTGGAAGCCTTT
CGCATAAGCTGCTCTCCATTCTTGTATTGTTGGTGATCGGAGTGGCCAAC
TCCATCAGTACCAAGGTCAGCACCCGATTGAATGGATTCTCCGTCACGAC
CAAATTCATCGCCATCGCCGCAATTGTTGTGGCCGGCCTAGTCGTCGTCA
TCCTGCAAGTTTCGGGAATCAACCGCGATGCTGGGTCCAATGACTGGCTC
AAGCACTCTTGGTTTGGATCTAGGAACACTTGGACTCCAGACGGTCGGGA
GATCGACTGGAGCTCCATGCACGGATGGGAATCGCTGGGTTACTATTCAA
CCGCACTCTACGGTGCTCTCTGGGCCTATTCGGGCTGGGATAAGATGTCT
CCCCACGATCGGTCGGAGGAGGAGGGTGTTCGCCGCCCACTCCTGGCCGA
TTCCAGAGGGACCGATGGGACCGAACCCGGGGCGGAGTCTACTTCCGCAT
TGGGCCCCAAGTTCACCCGCAACCTCGGAGCCATCGAGGCATTCGGCATC
GTCATCAGCATCGTGATCGGTAGTGGTATCTTCACTTCACCCGGTTCTAT
CGACACAAATGTTCCATCCCCTGGAGTCGCGCTTATCGTGTGGCTGGTCG
GAGGCATTCTGGCCTGGACCGGTGCTAGCACCATGGCCGAGCTCGGCACT
GCTATTCCGGGAGAAGACCGCAATCACCCATCTTCTAGGACCAGCATGCG
GTATCCTTGCTGCCATAGTGATCTGCCTCGTGGTCGCCGGCTCCCTGCTC
GGAAACTCCTTTGTGGCCGGTCGCATGATTGTCGCCGCATCAAAGCTGGA
TTGGTTTCCGCGGTTCCTGGGCGTGCTCGGACATGTGGGAATGCCTCCTG
ACCCGGAGCCTCCTTCTCAGTCGACCCCGCGATCGGATGCGCCCATAAAT
GCCACGATCATGGCCACTCTGCTACCAATCCCGTACCTGCTGTTCGGAGA
TTTTCGCGCTCTACTCACCTTCAATGGTCTGGGGGAATACTCGTTCTTCT
TCTTGACCGTTTTGGGTGCCATTCTTCTGCGATTCCGGCAGCCTGATCTC
CATCGGCCGTACAAACCTTTCATTGCAATTCCGCTGATATTTGCCCTTGT
CAGTGGCTTTGTGGTGGTAAGGGGAGCTGTTTTTGCGCCTCTCCAAGCGG
TGATTCTGATTTCAGTCTGGATCATCGGCATGGGGTTCTATTACCTCCGG
GCTTACCTTCGAAGGGAAAGGGTGACTAGAAGAAGCGAGTAGGCTATCTA
CGTCAGCGCAGAGCTCTCTGCTCCTGCCCGTCAGCTTCCACTGGCCATCA
ACACTGCCATTCCCATCATCATTCTTTGCTTCCTTGCCGCTAATGCCGCG
TACTACATCCTTCTTCCATGGAAGATCGTTTCAACTACTGATAGCGTGGC
CGTCGAGGCGTGCAGCCATATCTTCGATACATCTATGGGGATGTTTTTGG
CTTTCTTGCTGCTTGGACTTGGATCATCGCCGTGATGCCTGCAACGCTGG
CCATTTTGAGCATCGTGTTCATTGAAAGCATCTTCTCCGCGGCTGGCGTC
ACTGACCAGGCTGGAAGCCTTTCGCATAAGCTGCTCTCCATTCTTGTATT
GTTGGTGATCGGAGTGGCCAACTCCATCAGTACCAAGGTCAGCACCCGAT
TGAATGGATTCTCCGTCACGACCAAATTCATCGCCATCGCCGCAATTGTT
GTGGCCGGCCTAGTCGTCGTCATCCTGCAAGTTTCGGGAATCAACCGCGA
TGCTGGGTCCAATGACTGGCTCAAGCACTCTTGGTTTGGATCTAGGAACA
CTTGGACTCCAGACGGTCGGGAGATCGACTGGAGCTCCATGCACGGATGG
GAATCGCTGGGTTACTATTCAACCGCACTCTACGGTGCTCTCTGGGCCTA
TTCGGGCTGGGATAAGATGTCTCCCCACGATCGGTCGGAGGAGGAGGGTG
TTCGCCGCCCACTCCTGGCCGATTCCAGAGGGACCGATGGGACCGAACCC
GGGGCGGAGTCTACTTCCGCATTGGGCCCCAAGTTCACCCGCAACCTCGG
AGCCATCGAGGCATTCGGCATCGTCATCAGCATCGTGATCGGTAGTGGTA
TCTTCACTTCACCCGGTTCTATCGACACAAATGTTCCATCCCCTGGAGTC
GCGCTTATCGTGTGGCTGGTCGGAGGCATTCTGGCCTGGACCGGTGCTAG
CACCATGGCCGAGCTCGGCACTGCTATTCCGGGAGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003155-T1.utr3p1 | KJC3_003155-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003155-T1.utr5p1 | KJC3_003155-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002293 |
| DBxref | PFAM:PF13520 |
| DBxref | PFAM:PF00324 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1108627..1110815 - |
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