You are here

Home

KJC3_003156-T1, KJC3_003156-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003156-T1
Unique NameKJC3_003156-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1111592..1112626+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003156-T1 ID=KJC3_003156-T1|Name=KJC3_003156-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1035bp|location=Sequence derived from alignment at ch3:1111592..1112626+ (Aspergillus niger KJC3)
ATGCCACCCAACCCGGAGCATGGATTCCGCACCCTAAGAAGCATCGCAAA
GATAATGAAGACCCTAAAAAGTCGAGATGTCCTCAACTTTCTATCCCCTT
CTCTTTGCGAGGCAAACAACATAGTTCTGCTGCCCTTGGACCTCGAAGCT
GAGCACCATTATAAGGGTAATTCATCGACCACGCCCCTCCTCTTCGATCC
TCTCCCCATCGAAGCCTTGTACGCCTTTCCCATCGACCCGCACCCCTACG
CCTCAATAGACAAGCGTGAAGGCTCCTGTTTTTCGATTCACGACTACAAC
ACCATCAAGGACGATCCGTGCAAGTCCTATCCGCCTTTCCGTTTGAGAGA
ACTAGCCATCAAGCTAGAGAGATGGATCCATCTCGCTCCACGAACTCATC
GCTACAGCGCCCTCGCCTGTACTATGACGCATATTGGACCCTGGTATCCA
TCCAAGTGAGTACTTAGTACAACTCAATTCATCCATTAAATACATTCTCA
CAACCTAACATACCGATGACATGAACAGTACAATCGACAAATTATACGGC
CGGATATCGAACATTTACGACAAGCTCGGAGACTATCTGTATACCGTGAA
TCGAATTTACGAATGTATAGATTATGGGTACCCATATATTGTCATGATCA
CTCAGCATTGGTGCAAAGAAGCATGTCCCGAAGACTCTATGATGCGATTT
GAGCTCCTGGGCGTACTTCAGACGATGCGCACCCGACTAGAGAAAGATGA
AGAAGATTCGGAGGGGATGCTTCCTGTATGTCTTTGTGTCCCCTGTGACC
GTAGTCAAACGTCGCTAACTACTGACAACGATCATAGGTCCTAATGATTT
CATTCATGATACCCTCACATGCCCGGATCCTGCAGGCGCATATGCACAAT
GGAAAGCTGGTCGTGGCGCACAGTCGCATTTATAGCTTTGAAACTATGCG
TGAAGCGCCAATGGATTTGTTCACAAGATGGTTGCTGTCGAGCCCGGTTG
GACCGCGGAAGGCCAGTAATACGGACGAGGAGTAG
back to top

Coding sequence (CDS) from alignment at ch3:1111592..1112626+

>KJC3_003156-T1 ID=KJC3_003156-T1|Name=KJC3_003156-T1|organism=Aspergillus niger KJC3|type=CDS|length=2700bp|location=Sequence derived from alignment at ch3:1111592..1112626+ (Aspergillus niger KJC3)
ATGCCACCCAACCCGGAGCATGGATTCCGCACCCTAAGAAGCATCGCAAA
GATAATGAAGACCCTAAAAAGTCGAGATGTCCTCAACTTTCTATCCCCTT
CTCTTTGCGAGGCAAACAACATAGTTCTGCTGCCCTTGGACCTCGAAGCT
GAGCACCATTATAAGGGTAATTCATCGACCACGCCCCTCCTCTTCGATCC
TCTCCCCATCGAAGCCTTGTACGCCTTTCCCATCGACCCGCACCCCTACG
CCTCAATAGACAAGCGTGAAGGCTCCTGTTTTTCGATTCACGACTACAAC
ACCATCAAGGACGATCCGTGCAAGTCCTATCCGCCTTTCCGTTTGAGAGA
ACTAGCCATCAAGCTAGAGAGATGGATCCATCTCGCTCCACGAACTCATC
GCTACAGCGCCCTCGCCTGTACTATGACGCATATTGGACCCTGGTATCCA
TCCAATACAATCGACAAATTATACGGCCGGATATCGAACATTTACGACAA
GCTCGGAGACTATCTGTATACCGTGAATCGAATTTACGAATGTATAGATT
ATGGGTACCCATATATTGTCATGATCACTCAGCATTGGTGCAAAGAAGCA
TGTCCCGAAGACTCTATGATGCGATTTGAGCTCCTGGGCGTACTTCAGAC
GATGCGCACCCGACTAGAGAAAGATGAAGAAGATTCGGAGGGGATGCTTC
CTGTCCTAATGATTTCATTCATGATACCCTCACATGCCCGGATCCTGCAG
GCGCATATGCACAATGGAAAGCTGGTCGTGGCGCACAGTCGCATTTATAG
CTTTGAAACTATGCGTGAAGCGCCAATGGATTTGTTCACAAGATGGTTGC
TGTCGAGCCCGGTTGGACCGCGGAAGGCCAGTAATACGGACGAGGAGTAG
ATGCCACCCAACCCGGAGCATGGATTCCGCACCCTAAGAAGCATCGCAAA
GATAATGAAGACCCTAAAAAGTCGAGATGTCCTCAACTTTCTATCCCCTT
CTCTTTGCGAGGCAAACAACATAGTTCTGCTGCCCTTGGACCTCGAAGCT
GAGCACCATTATAAGGGTAATTCATCGACCACGCCCCTCCTCTTCGATCC
TCTCCCCATCGAAGCCTTGTACGCCTTTCCCATCGACCCGCACCCCTACG
CCTCAATAGACAAGCGTGAAGGCTCCTGTTTTTCGATTCACGACTACAAC
ACCATCAAGGACGATCCGTGCAAGTCCTATCCGCCTTTCCGTTTGAGAGA
ACTAGCCATCAAGCTAGAGAGATGGATCCATCTCGCTCCACGAACTCATC
GCTACAGCGCCCTCGCCTGTACTATGACGCATATTGGACCCTGGTATCCA
TCCAATACAATCGACAAATTATACGGCCGGATATCGAACATTTACGACAA
GCTCGGAGACTATCTGTATACCGTGAATCGAATTTACGAATGTATAGATT
ATGGGTACCCATATATTGTCATGATCACTCAGCATTGGTGCAAAGAAGCA
TGTCCCGAAGACTCTATGATGCGATTTGAGCTCCTGGGCGTACTTCAGAC
GATGCGCACCCGACTAGAGAAAGATGAAGAAGATTCGGAGGGGATGCTTC
CTGTCCTAATGATTTCATTCATGATACCCTCACATGCCCGGATCCTGCAG
GCGCATATGCACAATGGAAAGCTGGTCGTGGCGCACAGTCGCATTTATAG
CTTTGAAACTATGCGTGAAGCGCCAATGGATTTGTTCACAAGATGGTTGC
TGTCGAGCCCGGTTGGACCGCGGAAGGCCAGTAATACGGACGAGGAGTAG
ATGCCACCCAACCCGGAGCATGGATTCCGCACCCTAAGAAGCATCGCAAA
GATAATGAAGACCCTAAAAAGTCGAGATGTCCTCAACTTTCTATCCCCTT
CTCTTTGCGAGGCAAACAACATAGTTCTGCTGCCCTTGGACCTCGAAGCT
GAGCACCATTATAAGGGTAATTCATCGACCACGCCCCTCCTCTTCGATCC
TCTCCCCATCGAAGCCTTGTACGCCTTTCCCATCGACCCGCACCCCTACG
CCTCAATAGACAAGCGTGAAGGCTCCTGTTTTTCGATTCACGACTACAAC
ACCATCAAGGACGATCCGTGCAAGTCCTATCCGCCTTTCCGTTTGAGAGA
ACTAGCCATCAAGCTAGAGAGATGGATCCATCTCGCTCCACGAACTCATC
GCTACAGCGCCCTCGCCTGTACTATGACGCATATTGGACCCTGGTATCCA
TCCAATACAATCGACAAATTATACGGCCGGATATCGAACATTTACGACAA
GCTCGGAGACTATCTGTATACCGTGAATCGAATTTACGAATGTATAGATT
ATGGGTACCCATATATTGTCATGATCACTCAGCATTGGTGCAAAGAAGCA
TGTCCCGAAGACTCTATGATGCGATTTGAGCTCCTGGGCGTACTTCAGAC
GATGCGCACCCGACTAGAGAAAGATGAAGAAGATTCGGAGGGGATGCTTC
CTGTCCTAATGATTTCATTCATGATACCCTCACATGCCCGGATCCTGCAG
GCGCATATGCACAATGGAAAGCTGGTCGTGGCGCACAGTCGCATTTATAG
CTTTGAAACTATGCGTGAAGCGCCAATGGATTTGTTCACAAGATGGTTGC
TGTCGAGCCCGGTTGGACCGCGGAAGGCCAGTAATACGGACGAGGAGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003156KJC3_003156Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003156-T1.exon1KJC3_003156-T1.exon1Aspergillus niger KJC3exon
KJC3_003156-T1.exon2KJC3_003156-T1.exon2Aspergillus niger KJC3exon
KJC3_003156-T1.exon3KJC3_003156-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003156-T1.cdsKJC3_003156-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003156-T1KJC3_003156-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1111592..1112626 +
Powered by Drupal