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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1116057..1117601- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003159-T1 ID=KJC3_003159-T1|Name=KJC3_003159-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1545bp|location=Sequence derived from alignment at ch3:1116057..1117601- (Aspergillus niger KJC3)
CCACTTATCTAGCAGGCTTCACTGTTCAGCGATCAAAGTATGAAAGGAAC
TCCTCGGTCGGAGTTATCGATCTGAGAGGTCGTCTTTTCCCTCTATCTCC
CTCTCTTCCGGCCATGTCCTTAGACGGCTCACTATGGGCACGCTGAAATT
GACCCTGCCCAGCTCTCCTTCAGTCCAGGTATTTAAAAGAAACCGGCAGA
GAAAGTTACTTTATACGGGGCTATCATTGGTTTTTCTCCTCGTGTTGTGG
GGTACCTTATTCATAAGTTCTGGTGGACGGTATGCTGGGGTGCAGAGACT
CGGTTCATCAGACAGATTGAGTTTGGACACAATCAAGAATGAAACATTAG
GGGTAAGCTTTCATTGCAAAACATACCATACACCCGAGTATTAATCATGG
CGTAGTTCGAAAGGATATTTTGTATCAATCTTCCCAGTCGACCTGATAAA
CGGGATGCAATCACACTAGGCTCATCAGTCACGCAGTTCCGCGTGGACTG
GATCGATGGCGTATCTTCCGAGGATATGAGCCCAAAGGCTTATCCACCAG
TAAGATTCCTTCGGCTACTACACCTCAACCTATCCGCTAAGACCTCTCTC
TCTCAGCGATACGATGAACCCGATAGACCTCGCATGTTAGCCGGTGAAAT
CGGGAGCTGGCGAGCTCACCTGAACGCAATGCAACGGTAGCCATAACCCC
ACCAGTATCTAGACACATAACTGACATTCGCTCAGCATCGTCTCAGAGCG
CATATCCAGCGCCCTAATCCTCGAAGACGACGTCGACTGGGACGTGACAC
TAAAGAACCAACTACAAGAATTCGCACTAGGAACCCTCGCTCTCCAAGCC
GAATCCCACCCCGAGACCACACCCTATGGCGACGAGTGGGACATCCTCTG
GCTCGGCCACTGCGGGACGAAATGCCAAAAGAACATCCCTTTCTACATAC
TGAAGAACGACCCAACATCTATCCCCGTCTACGGCCTCCCACAATACTGG
GCCGGCCCAGCCGTCCACGAACTCGTCGACAACATCAAACATAACCGCAT
TATCTGCAAGACGTCGCTGGCAGTCTGCTCCAGCGCATATGCAGTATCTT
TCAACGCTGCACAGAAAATCCTCGCTGCGTTATCTGTCTCACCCGATGAT
GAGAGCATGCCGCCTGGTCAGAGCGTCGTTTATGATGTTATGCTAGGGAG
ATTGTGCGAGAGTGGGTACTTGAGGTGTATCTCGTCGCATCCTTCGCTTT
TTGGCAACTGGAAGGGCGCGGGATTGCCTTCTAAAGCGTCGGATATCCAG
TATAAGTATGATGGACCGAGGGAGCAGAAGACGTTTGAGGGGGCGAGTTT
CCAAGGGTTGGTTTATAGTACCATGTATAATTTGGGGACTTTGCTCGACG
GGGAGAGGGTAGTGGTGTCCAATGTTAATGATGTTATGAAGCCGAAATTG
GATCTTAAGAAAGTGAGAAGGGTGGAGGGTGGGTTGCATGTGCTGGATTA
TGAGGAGATGGTTTTGAGTCGTGTAGGATAGTTAAACATATTGAG back to topCoding sequence (CDS) from alignment at ch3:1116057..1117601- >KJC3_003159-T1 ID=KJC3_003159-T1|Name=KJC3_003159-T1|organism=Aspergillus niger KJC3|type=CDS|length=4956bp|location=Sequence derived from alignment at ch3:1116057..1117601- (Aspergillus niger KJC3)
CATCGTCTCAGAGCGCATATCCAGCGCCCTAATCCTCGAAGACGACGTCG
ACTGGGACGTGACACTAAAGAACCAACTACAAGAATTCGCACTAGGAACC
CTCGCTCTCCAAGCCGAATCCCACCCCGAGACCACACCCTATGGCGACGA
GTGGGACATCCTCTGGCTCGGCCACTGCGGGACGAAATGCCAAAAGAACA
TCCCTTTCTACATACTGAAGAACGACCCAACATCTATCCCCGTCTACGGC
CTCCCACAATACTGGGCCGGCCCAGCCGTCCACGAACTCGTCGACAACAT
CAAACATAACCGCATTATCTGCAAGACGTCGCTGGCAGTCTGCTCCAGCG
CATATGCAGTATCTTTCAACGCTGCACAGAAAATCCTCGCTGCGTTATCT
GTCTCACCCGATGATGAGAGCATGCCGCCTGGTCAGAGCGTCGTTTATGA
TGTTATGCTAGGGAGATTGTGCGAGAGTGGGTACTTGAGGTGTATCTCGT
CGCATCCTTCGCTTTTTGGCAACTGGAAGGGCGCGGGATTGCCTTCTAAA
GCGTCGGATATCCAGTATAAGTATGATGGACCGAGGGAGCAGAAGACGTT
TGAGGGGGCGAGTTTCCAAGGGTTGGTTTATAGTACCATGTATAATTTGG
GGACTTTGCTCGACGGGGAGAGGGTAGTGGTGTCCAATGTTAATGATGTT
ATGAAGCCGAAATTGGATCTTAAGAAAGTGAGAAGGGTGGAGGGTGGGTT
GCATGTGCTGGATTATGAGGAGATGGTTTTGAGTCGTGTAGGATAGCGAT
ACGATGAACCCGATAGACCTCGCATGTTAGCCGGTGAAATCGGGAGCTGG
CGAGCTCACCTGAACGCAATGCAACGTTCGAAAGGATATTTTGTATCAAT
CTTCCCAGTCGACCTGATAAACGGGATGCAATCACACTAGGCTCATCAGT
CACGCAGTTCCGCGTGGACTGGATCGATGGCGTATCTTCCGAGGATATGA
GCCCAAAGGCTTATCCACCAATGGGCACGCTGAAATTGACCCTGCCCAGC
TCTCCTTCAGTCCAGGTATTTAAAAGAAACCGGCAGAGAAAGTTACTTTA
TACGGGGCTATCATTGGTTTTTCTCCTCGTGTTGTGGGGTACCTTATTCA
TAAGTTCTGGTGGACGGTATGCTGGGGTGCAGAGACTCGGTTCATCAGAC
AGATTGAGTTTGGACACAATCAAGAATGAAACATTAGGGCATCGTCTCAG
AGCGCATATCCAGCGCCCTAATCCTCGAAGACGACGTCGACTGGGACGTG
ACACTAAAGAACCAACTACAAGAATTCGCACTAGGAACCCTCGCTCTCCA
AGCCGAATCCCACCCCGAGACCACACCCTATGGCGACGAGTGGGACATCC
TCTGGCTCGGCCACTGCGGGACGAAATGCCAAAAGAACATCCCTTTCTAC
ATACTGAAGAACGACCCAACATCTATCCCCGTCTACGGCCTCCCACAATA
CTGGGCCGGCCCAGCCGTCCACGAACTCGTCGACAACATCAAACATAACC
GCATTATCTGCAAGACGTCGCTGGCAGTCTGCTCCAGCGCATATGCAGTA
TCTTTCAACGCTGCACAGAAAATCCTCGCTGCGTTATCTGTCTCACCCGA
TGATGAGAGCATGCCGCCTGGTCAGAGCGTCGTTTATGATGTTATGCTAG
GGAGATTGTGCGAGAGTGGGTACTTGAGGTGTATCTCGTCGCATCCTTCG
CTTTTTGGCAACTGGAAGGGCGCGGGATTGCCTTCTAAAGCGTCGGATAT
CCAGTATAAGTATGATGGACCGAGGGAGCAGAAGACGTTTGAGGGGGCGA
GTTTCCAAGGGTTGGTTTATAGTACCATGTATAATTTGGGGACTTTGCTC
GACGGGGAGAGGGTAGTGGTGTCCAATGTTAATGATGTTATGAAGCCGAA
ATTGGATCTTAAGAAAGTGAGAAGGGTGGAGGGTGGGTTGCATGTGCTGG
ATTATGAGGAGATGGTTTTGAGTCGTGTAGGATAGCGATACGATGAACCC
GATAGACCTCGCATGTTAGCCGGTGAAATCGGGAGCTGGCGAGCTCACCT
GAACGCAATGCAACGTTCGAAAGGATATTTTGTATCAATCTTCCCAGTCG
ACCTGATAAACGGGATGCAATCACACTAGGCTCATCAGTCACGCAGTTCC
GCGTGGACTGGATCGATGGCGTATCTTCCGAGGATATGAGCCCAAAGGCT
TATCCACCAATGGGCACGCTGAAATTGACCCTGCCCAGCTCTCCTTCAGT
CCAGGTATTTAAAAGAAACCGGCAGAGAAAGTTACTTTATACGGGGCTAT
CATTGGTTTTTCTCCTCGTGTTGTGGGGTACCTTATTCATAAGTTCTGGT
GGACGGTATGCTGGGGTGCAGAGACTCGGTTCATCAGACAGATTGAGTTT
GGACACAATCAAGAATGAAACATTAGGGCATCGTCTCAGAGCGCATATCC
AGCGCCCTAATCCTCGAAGACGACGTCGACTGGGACGTGACACTAAAGAA
CCAACTACAAGAATTCGCACTAGGAACCCTCGCTCTCCAAGCCGAATCCC
ACCCCGAGACCACACCCTATGGCGACGAGTGGGACATCCTCTGGCTCGGC
CACTGCGGGACGAAATGCCAAAAGAACATCCCTTTCTACATACTGAAGAA
CGACCCAACATCTATCCCCGTCTACGGCCTCCCACAATACTGGGCCGGCC
CAGCCGTCCACGAACTCGTCGACAACATCAAACATAACCGCATTATCTGC
AAGACGTCGCTGGCAGTCTGCTCCAGCGCATATGCAGTATCTTTCAACGC
TGCACAGAAAATCCTCGCTGCGTTATCTGTCTCACCCGATGATGAGAGCA
TGCCGCCTGGTCAGAGCGTCGTTTATGATGTTATGCTAGGGAGATTGTGC
GAGAGTGGGTACTTGAGGTGTATCTCGTCGCATCCTTCGCTTTTTGGCAA
CTGGAAGGGCGCGGGATTGCCTTCTAAAGCGTCGGATATCCAGTATAAGT
ATGATGGACCGAGGGAGCAGAAGACGTTTGAGGGGGCGAGTTTCCAAGGG
TTGGTTTATAGTACCATGTATAATTTGGGGACTTTGCTCGACGGGGAGAG
GGTAGTGGTGTCCAATGTTAATGATGTTATGAAGCCGAAATTGGATCTTA
AGAAAGTGAGAAGGGTGGAGGGTGGGTTGCATGTGCTGGATTATGAGGAG
ATGGTTTTGAGTCGTGTAGGATAGCGATACGATGAACCCGATAGACCTCG
CATGTTAGCCGGTGAAATCGGGAGCTGGCGAGCTCACCTGAACGCAATGC
AACGTTCGAAAGGATATTTTGTATCAATCTTCCCAGTCGACCTGATAAAC
GGGATGCAATCACACTAGGCTCATCAGTCACGCAGTTCCGCGTGGACTGG
ATCGATGGCGTATCTTCCGAGGATATGAGCCCAAAGGCTTATCCACCAAT
GGGCACGCTGAAATTGACCCTGCCCAGCTCTCCTTCAGTCCAGGTATTTA
AAAGAAACCGGCAGAGAAAGTTACTTTATACGGGGCTATCATTGGTTTTT
CTCCTCGTGTTGTGGGGTACCTTATTCATAAGTTCTGGTGGACGGTATGC
TGGGGTGCAGAGACTCGGTTCATCAGACAGATTGAGTTTGGACACAATCA
AGAATGAAACATTAGGGCATCGTCTCAGAGCGCATATCCAGCGCCCTAAT
CCTCGAAGACGACGTCGACTGGGACGTGACACTAAAGAACCAACTACAAG
AATTCGCACTAGGAACCCTCGCTCTCCAAGCCGAATCCCACCCCGAGACC
ACACCCTATGGCGACGAGTGGGACATCCTCTGGCTCGGCCACTGCGGGAC
GAAATGCCAAAAGAACATCCCTTTCTACATACTGAAGAACGACCCAACAT
CTATCCCCGTCTACGGCCTCCCACAATACTGGGCCGGCCCAGCCGTCCAC
GAACTCGTCGACAACATCAAACATAACCGCATTATCTGCAAGACGTCGCT
GGCAGTCTGCTCCAGCGCATATGCAGTATCTTTCAACGCTGCACAGAAAA
TCCTCGCTGCGTTATCTGTCTCACCCGATGATGAGAGCATGCCGCCTGGT
CAGAGCGTCGTTTATGATGTTATGCTAGGGAGATTGTGCGAGAGTGGGTA
CTTGAGGTGTATCTCGTCGCATCCTTCGCTTTTTGGCAACTGGAAGGGCG
CGGGATTGCCTTCTAAAGCGTCGGATATCCAGTATAAGTATGATGGACCG
AGGGAGCAGAAGACGTTTGAGGGGGCGAGTTTCCAAGGGTTGGTTTATAG
TACCATGTATAATTTGGGGACTTTGCTCGACGGGGAGAGGGTAGTGGTGT
CCAATGTTAATGATGTTATGAAGCCGAAATTGGATCTTAAGAAAGTGAGA
AGGGTGGAGGGTGGGTTGCATGTGCTGGATTATGAGGAGATGGTTTTGAG
TCGTGTAGGATAGCGATACGATGAACCCGATAGACCTCGCATGTTAGCCG
GTGAAATCGGGAGCTGGCGAGCTCACCTGAACGCAATGCAACGTTCGAAA
GGATATTTTGTATCAATCTTCCCAGTCGACCTGATAAACGGGATGCAATC
ACACTAGGCTCATCAGTCACGCAGTTCCGCGTGGACTGGATCGATGGCGT
ATCTTCCGAGGATATGAGCCCAAAGGCTTATCCACCAATGGGCACGCTGA
AATTGACCCTGCCCAGCTCTCCTTCAGTCCAGGTATTTAAAAGAAACCGG
CAGAGAAAGTTACTTTATACGGGGCTATCATTGGTTTTTCTCCTCGTGTT
GTGGGGTACCTTATTCATAAGTTCTGGTGGACGGTATGCTGGGGTGCAGA
GACTCGGTTCATCAGACAGATTGAGTTTGGACACAATCAAGAATGAAACA
TTAGGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003159-T1.utr3p1 | KJC3_003159-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003159-T1.utr5p1 | KJC3_003159-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT25 |
| DBxref | InterPro:IPR002654 |
| DBxref | PFAM:PF01755 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1116057..1117601 - |
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