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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1138156..1139395+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003167-T1 ID=KJC3_003167-T1|Name=KJC3_003167-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1240bp|location=Sequence derived from alignment at ch3:1138156..1139395+ (Aspergillus niger KJC3)
CCCCGTGCGTGGAATTATCCAACCCTTGAACGGCCAACATGCCATGGTAA
GCACTAAAATGTCTAGGCTACTACTAGCTCACCACTAAGCGTAGCTTTGA
CTGGAAGATCGATATAGTCTAACTAACAGCTCACAGCCTTGCCTTCCCAT
TCTCTCTTTGTCTTTCCAAACGCTACCCCACCCTTGTGGACGCGAGTATA
AGTATTTCCCCAAACACTCTCAGCCCTTCTGCTTTTTCTAATCACACTTC
ATCTCATCCCCAATTTCCTACCTATCACACAATAGCCATGTCTACCTCCA
AGCCCGTGATCCTCCTCATCCCAGGAGGCTGGCACACCCCAAACTCATAC
GACAAGCTCACAAACCTCCTCAAGTCATCTGGCCACGAAGTCCACGTCCC
CGCGCTACACTCAATGAACGGTGCACGGCCTCCAACAGCCGATCTAGAAA
CCGACACAGCTGTCTTCCGCGAATACACTCAGAACCTCGCCGACGCCGGC
AAGAATATCATTGTGATCACACATTCCTACAGCGGCCAAGTAGCTACCAA
CGGTCTTTCGGACCTGGCAATCTCAAACCGCAGCAAGCAAGGCCTACCAG
GCGGAGTAGTGCATCTTGTTTCCCTGTCCGCCTTCACCATTACCGAAGGA
CGAAGCATGTTTGACATCGTGGACCAGTTCGGTCACGCGTCGTTGATGCC
CATGGCGTTTGATTTCGCCGAGGATGGGACGTGCGTGGACCGCGATCCTA
AGGGATTACTTGTTACGCCCGGTCCGGAGGAGGCTGAGTCCGAGGTGGAA
TGGTATCTGGGGACCCTCCAGCGGTGGAATGGCAAGTGCATGTACCAACC
TATTACTGCGAACCGGGCTGCTTGGAGGGATATCCCTGTGACATATGTCT
TGTCAACTAGGGATATGACGGTTCCTGTTGACTATCAGAGGTGGATGGTG
GATATGATGAGAAAGGAGGGGGCTGAGGTTGAGGATTTTGAGTTGGACTC
CGGCCATTCGGTTGATTTTAGTAGAGCGAAGGAGGTGTCTGAGATTGTGA
ATAACGTGGTGGCTCGCTATGTAGGGAAGTGATACGATTGCAATTATAGA
TGATCAAGTGGCACAATTCGCTTCAAAAAGTCATAGAGCGGTCTTTGATA
AACGAAAATAGCTTTTCATCTTTGGGTTTAGTTGGCTTCAACTGGAACAT
GCCTTGTACGCGTCTAGAACACCTGATAAAGCTGTTGGGC back to topCoding sequence (CDS) from alignment at ch3:1138156..1139395+ >KJC3_003167-T1 ID=KJC3_003167-T1|Name=KJC3_003167-T1|organism=Aspergillus niger KJC3|type=CDS|length=795bp|location=Sequence derived from alignment at ch3:1138156..1139395+ (Aspergillus niger KJC3)
ATGTCTACCTCCAAGCCCGTGATCCTCCTCATCCCAGGAGGCTGGCACAC
CCCAAACTCATACGACAAGCTCACAAACCTCCTCAAGTCATCTGGCCACG
AAGTCCACGTCCCCGCGCTACACTCAATGAACGGTGCACGGCCTCCAACA
GCCGATCTAGAAACCGACACAGCTGTCTTCCGCGAATACACTCAGAACCT
CGCCGACGCCGGCAAGAATATCATTGTGATCACACATTCCTACAGCGGCC
AAGTAGCTACCAACGGTCTTTCGGACCTGGCAATCTCAAACCGCAGCAAG
CAAGGCCTACCAGGCGGAGTAGTGCATCTTGTTTCCCTGTCCGCCTTCAC
CATTACCGAAGGACGAAGCATGTTTGACATCGTGGACCAGTTCGGTCACG
CGTCGTTGATGCCCATGGCGTTTGATTTCGCCGAGGATGGGACGTGCGTG
GACCGCGATCCTAAGGGATTACTTGTTACGCCCGGTCCGGAGGAGGCTGA
GTCCGAGGTGGAATGGTATCTGGGGACCCTCCAGCGGTGGAATGGCAAGT
GCATGTACCAACCTATTACTGCGAACCGGGCTGCTTGGAGGGATATCCCT
GTGACATATGTCTTGTCAACTAGGGATATGACGGTTCCTGTTGACTATCA
GAGGTGGATGGTGGATATGATGAGAAAGGAGGGGGCTGAGGTTGAGGATT
TTGAGTTGGACTCCGGCCATTCGGTTGATTTTAGTAGAGCGAAGGAGGTG
TCTGAGATTGTGAATAACGTGGTGGCTCGCTATGTAGGGAAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003167-T1.utr5p1 | KJC3_003167-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003167-T1.utr3p1 | KJC3_003167-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000073 |
| DBxref | InterPro:IPR029058 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1138156..1139395 + |
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