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KJC3_003170-T1, KJC3_003170-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003170-T1
Unique NameKJC3_003170-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1144678..1146193-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003170-T1 ID=KJC3_003170-T1|Name=KJC3_003170-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1516bp|location=Sequence derived from alignment at ch3:1144678..1146193- (Aspergillus niger KJC3)
CTCGAACCTGTTCATGTTTCTTTCGCCAGATATTGTAAATCTTTAACGAT
CGAGGCCTTAGATTGGGCAGGAGCTTTACCTCTACATATGTATGGTTACA
TTTCCCCCTACTACGGCCTCCTCTCTCGCCCTTTGTCTTGTATTTTGAGA
GCCACCTTCACTGCACATCTTATTTGGCTCAGAGATATACTCACGACCTT
ACCTTCGTTGACATATCCAACACGTCTCTTGTTCCATATTCAAATTCTAA
TATCAGCTACTATTTGTGTTTTCATTTTGCTTTACAGGAAGGCACAGGTG
AAACCCCACCCGCGATATATAAATCCGGCGTCATGTACCGATTCCCACTT
CATATCGTTCGTCGGGCCCCACGACTCACCCCTACATTACAAACCCCAAT
CAAGCAATACTACCATGATCGCAAGCAATCATCCCATCCACATACCATAA
AGCCATCAAAGACCGAACTATCAAATAAGCAACTCACGCCACAAAACCTC
GAAACAGCCATCCACTCCCTCTTCCACGACGGTCTAGTCATAGTCGAAAA
CGCCATCCCCCACGACCCCCTCGACCAGCTTAACGCAAAAATGATCCAAG
ACGCCTACACCCTGCAAGCCAGAAACGAAAACAGCCCTTACAACTACAAC
CCAGGAAACATCCAGCAAGACCCACCCCCAACAAGAGAATACTTCTCCAA
AGATATCTTCCTGAGTACGTGATTGTGCCCCCAAGCCACGGTTTCCACCA
CCACTCAAGTACTAAAATAATCGACCACAGACCCCCTCGCCATCCAAATC
ACCTCAACAGCCCTAGGCCCCCGTCCTAAATGGACCTTCTGCTCAGGTAA
CACCGCCATGCCACCAACCAGTACCTGTCCCCCCACTTCGCAGCCCGTAC
ACACCGACGCGGATTTCGATCATCCCTCGCATCCATTCGCCTACGTTATC
AACGTCCCTCTGGTTACTATGACGCCTGAGAATGGATCCACGGAAATTTG
GCTCGGCACGCACGCGGACTCAGGTCTGCATGTGCAAGAGGGAGCGCATG
GCGCGGATCGCGCTAGTGGACGGATTAAGGTGCAGGAGTTGGAGAAACGT
CGTGCTGTGAGAATGCCCTGCCAGCCTGTTGTGCCGAAGGGGTCATTGGT
CATTCGAGATTTGAGGCTTTGGCATGCGGGCATGGGGAATTGGACGGGGA
ATGTAAGGGTCATGTTGGCCATGAGTGAGTAGTCCTTTTTCCTTTGGGAT
TTGGTGGTTGTGGTAGGCTGGCGTTGACTAACGTTGTCGTGTAGTTCATT
TTGCGCCGTGGTATAGGAATAGGATGAGGTTGGAACTTGCGGAGGAGTTG
AGGCCCATGGTTGAGAGGGAGACTGGGTTGGAGATTCCGGTTGATTGGGT
GTTCGAGGAGGAGGCGTTGGCGCGGTACTTGAATCGGGGATTCGGAAATG
AGTATGATTTTAGTCAGGAGCCGTAGAAGTAAGAAGTGGTTTGGGATAGA
AAAATATTGTCGCGGG
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Coding sequence (CDS) from alignment at ch3:1144678..1146193-

>KJC3_003170-T1 ID=KJC3_003170-T1|Name=KJC3_003170-T1|organism=Aspergillus niger KJC3|type=CDS|length=3024bp|location=Sequence derived from alignment at ch3:1144678..1146193- (Aspergillus niger KJC3)
TTCATTTTGCGCCGTGGTATAGGAATAGGATGAGGTTGGAACTTGCGGAG
GAGTTGAGGCCCATGGTTGAGAGGGAGACTGGGTTGGAGATTCCGGTTGA
TTGGGTGTTCGAGGAGGAGGCGTTGGCGCGGTACTTGAATCGGGGATTCG
GAAATGAGTATGATTTTAGTCAGGAGCCGTAGACCCCCTCGCCATCCAAA
TCACCTCAACAGCCCTAGGCCCCCGTCCTAAATGGACCTTCTGCTCAGGT
AACACCGCCATGCCACCAACCAGTACCTGTCCCCCCACTTCGCAGCCCGT
ACACACCGACGCGGATTTCGATCATCCCTCGCATCCATTCGCCTACGTTA
TCAACGTCCCTCTGGTTACTATGACGCCTGAGAATGGATCCACGGAAATT
TGGCTCGGCACGCACGCGGACTCAGGTCTGCATGTGCAAGAGGGAGCGCA
TGGCGCGGATCGCGCTAGTGGACGGATTAAGGTGCAGGAGTTGGAGAAAC
GTCGTGCTGTGAGAATGCCCTGCCAGCCTGTTGTGCCGAAGGGGTCATTG
GTCATTCGAGATTTGAGGCTTTGGCATGCGGGCATGGGGAATTGGACGGG
GAATGTAAGGGTCATGTTGGCCATGAATGTACCGATTCCCACTTCATATC
GTTCGTCGGGCCCCACGACTCACCCCTACATTACAAACCCCAATCAAGCA
ATACTACCATGATCGCAAGCAATCATCCCATCCACATACCATAAAGCCAT
CAAAGACCGAACTATCAAATAAGCAACTCACGCCACAAAACCTCGAAACA
GCCATCCACTCCCTCTTCCACGACGGTCTAGTCATAGTCGAAAACGCCAT
CCCCCACGACCCCCTCGACCAGCTTAACGCAAAAATGATCCAAGACGCCT
ACACCCTGCAAGCCAGAAACGAAAACAGCCCTTACAACTACAACCCAGGA
AACATCCAGCAAGACCCACCCCCAACAAGAGAATACTTCTCCAAAGATAT
CTTCCTGATTCATTTTGCGCCGTGGTATAGGAATAGGATGAGGTTGGAAC
TTGCGGAGGAGTTGAGGCCCATGGTTGAGAGGGAGACTGGGTTGGAGATT
CCGGTTGATTGGGTGTTCGAGGAGGAGGCGTTGGCGCGGTACTTGAATCG
GGGATTCGGAAATGAGTATGATTTTAGTCAGGAGCCGTAGACCCCCTCGC
CATCCAAATCACCTCAACAGCCCTAGGCCCCCGTCCTAAATGGACCTTCT
GCTCAGGTAACACCGCCATGCCACCAACCAGTACCTGTCCCCCCACTTCG
CAGCCCGTACACACCGACGCGGATTTCGATCATCCCTCGCATCCATTCGC
CTACGTTATCAACGTCCCTCTGGTTACTATGACGCCTGAGAATGGATCCA
CGGAAATTTGGCTCGGCACGCACGCGGACTCAGGTCTGCATGTGCAAGAG
GGAGCGCATGGCGCGGATCGCGCTAGTGGACGGATTAAGGTGCAGGAGTT
GGAGAAACGTCGTGCTGTGAGAATGCCCTGCCAGCCTGTTGTGCCGAAGG
GGTCATTGGTCATTCGAGATTTGAGGCTTTGGCATGCGGGCATGGGGAAT
TGGACGGGGAATGTAAGGGTCATGTTGGCCATGAATGTACCGATTCCCAC
TTCATATCGTTCGTCGGGCCCCACGACTCACCCCTACATTACAAACCCCA
ATCAAGCAATACTACCATGATCGCAAGCAATCATCCCATCCACATACCAT
AAAGCCATCAAAGACCGAACTATCAAATAAGCAACTCACGCCACAAAACC
TCGAAACAGCCATCCACTCCCTCTTCCACGACGGTCTAGTCATAGTCGAA
AACGCCATCCCCCACGACCCCCTCGACCAGCTTAACGCAAAAATGATCCA
AGACGCCTACACCCTGCAAGCCAGAAACGAAAACAGCCCTTACAACTACA
ACCCAGGAAACATCCAGCAAGACCCACCCCCAACAAGAGAATACTTCTCC
AAAGATATCTTCCTGATTCATTTTGCGCCGTGGTATAGGAATAGGATGAG
GTTGGAACTTGCGGAGGAGTTGAGGCCCATGGTTGAGAGGGAGACTGGGT
TGGAGATTCCGGTTGATTGGGTGTTCGAGGAGGAGGCGTTGGCGCGGTAC
TTGAATCGGGGATTCGGAAATGAGTATGATTTTAGTCAGGAGCCGTAGAC
CCCCTCGCCATCCAAATCACCTCAACAGCCCTAGGCCCCCGTCCTAAATG
GACCTTCTGCTCAGGTAACACCGCCATGCCACCAACCAGTACCTGTCCCC
CCACTTCGCAGCCCGTACACACCGACGCGGATTTCGATCATCCCTCGCAT
CCATTCGCCTACGTTATCAACGTCCCTCTGGTTACTATGACGCCTGAGAA
TGGATCCACGGAAATTTGGCTCGGCACGCACGCGGACTCAGGTCTGCATG
TGCAAGAGGGAGCGCATGGCGCGGATCGCGCTAGTGGACGGATTAAGGTG
CAGGAGTTGGAGAAACGTCGTGCTGTGAGAATGCCCTGCCAGCCTGTTGT
GCCGAAGGGGTCATTGGTCATTCGAGATTTGAGGCTTTGGCATGCGGGCA
TGGGGAATTGGACGGGGAATGTAAGGGTCATGTTGGCCATGAATGTACCG
ATTCCCACTTCATATCGTTCGTCGGGCCCCACGACTCACCCCTACATTAC
AAACCCCAATCAAGCAATACTACCATGATCGCAAGCAATCATCCCATCCA
CATACCATAAAGCCATCAAAGACCGAACTATCAAATAAGCAACTCACGCC
ACAAAACCTCGAAACAGCCATCCACTCCCTCTTCCACGACGGTCTAGTCA
TAGTCGAAAACGCCATCCCCCACGACCCCCTCGACCAGCTTAACGCAAAA
ATGATCCAAGACGCCTACACCCTGCAAGCCAGAAACGAAAACAGCCCTTA
CAACTACAACCCAGGAAACATCCAGCAAGACCCACCCCCAACAAGAGAAT
ACTTCTCCAAAGATATCTTCCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003170KJC3_003170Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003170-T1KJC3_003170-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003170-T1.cdsKJC3_003170-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003170-T1.utr3p1KJC3_003170-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003170-T1.exon3KJC3_003170-T1.exon3Aspergillus niger KJC3exon
KJC3_003170-T1.exon2KJC3_003170-T1.exon2Aspergillus niger KJC3exon
KJC3_003170-T1.exon1KJC3_003170-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003170-T1.utr5p1KJC3_003170-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008775
DBxrefPFAM:PF05721
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1144678..1146193 -
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