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KJC3_003175-T1, KJC3_003175-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003175-T1
Unique NameKJC3_003175-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1153306..1154573-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003175-T1 ID=KJC3_003175-T1|Name=KJC3_003175-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1268bp|location=Sequence derived from alignment at ch3:1153306..1154573- (Aspergillus niger KJC3)
CTCTTTCTAAGGCATTAATTTATCATCATACTCCTCTTCTATAATCAATC
AATCATGCCCACTCTCAGCCAGGTCCGTCAGTCCAACACGGCCCTGGGCG
CTCAGCGCCAAAAGATGGTCGCCGTCTTCGTGGGAGGCACCAGCGGCATA
GGAGAAGCGACAGCCAAGCAGATGGCGCTCGCTGTAAAACAACCAACCAT
CCACCTGGTTGGCCGGAATCCTGCATCCGGTTCCAGAGTCCTAGAGGAGC
TCCGGGCTTCCAATCCAAACGGATCATATAACTTCATTCAATCGGATGTC
TCACTTCTGCGCAGCGTCGACAAAGCCTGTGAGGAAATTACGGACAAGGA
AAAGCAAATTGATCTCCTCTTCATGTCCACCGGTCACCTATCTCTCTCCA
AGAACGGTACGTAGCTGAAACAGCCTCATCCTGGTCAGTCGGAACGGCTT
CAAACGCCACTGCGCCAACCCCAACACCCCTATACCTTACTAGTGCTGAC
AGGGGGATCCGCACACAGAAACCGACGAGGGACTAGACGACAACCATGCC
CTTCGTTACTACTCCCGCATGCGCTTCGTGCAGAATCTCATGCCCTTGCT
CAGTGCCTCCCCTGGTCCAGCCAGGGTCGTATCCATCCTAGCAGGCGGCC
AAGAAGGCACCATGGAAGAAGACAATTTCGACCTGACGAAATCTTGGAGT
TTTACGAAAGCAAACACATACGCCGCCACCTTAAACTCGCTAGCGATAGA
GCATCTAGCCACCGCCCATCCGACCGTAAGCTTTCTACACGTCTTCCCGG
GTATTGTACGGACTCCATTGATGAACGCCTCCTTCGGAAATTACGGCGGC
GCCATCCTGAGCTTTCTTTCTCGTCCGATTTCAATGTCCCCGGAGGAGAG
TGGCGAGCGTAATTTGTTTCTCTCGACGTCGGCAGCCTATCCACCAGCCA
CGCCGAAAGATCCATCCCAGCTGGGGGTTCCCTTGGTCAAAGGGGTGGAC
ACGGCGTCTGCATCAACTGGCAAAGTCGGCGGAGGTTCATATATTCTTAA
ATACGATGGGAGTAATGCAACCCGGGAGAAATTGATGGCTGATTATCGAG
CCAGGAGTTTCCCTAGCAAAGTTTGGGACCATACACTGGAGACATTCAAG
CGGGTGCTGCGGTCAGACTGATGATGACGTCTTTCATGGGGTTGTTTTCT
TTTTCTCTGTTTTTATTTCTTTATTTCTTTAATTAAATATTTAATTAAAT
TAATTATTATTGTTATAA
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Coding sequence (CDS) from alignment at ch3:1153306..1154573-

>KJC3_003175-T1 ID=KJC3_003175-T1|Name=KJC3_003175-T1|organism=Aspergillus niger KJC3|type=CDS|length=2010bp|location=Sequence derived from alignment at ch3:1153306..1154573- (Aspergillus niger KJC3)
AAACCGACGAGGGACTAGACGACAACCATGCCCTTCGTTACTACTCCCGC
ATGCGCTTCGTGCAGAATCTCATGCCCTTGCTCAGTGCCTCCCCTGGTCC
AGCCAGGGTCGTATCCATCCTAGCAGGCGGCCAAGAAGGCACCATGGAAG
AAGACAATTTCGACCTGACGAAATCTTGGAGTTTTACGAAAGCAAACACA
TACGCCGCCACCTTAAACTCGCTAGCGATAGAGCATCTAGCCACCGCCCA
TCCGACCGTAAGCTTTCTACACGTCTTCCCGGGTATTGTACGGACTCCAT
TGATGAACGCCTCCTTCGGAAATTACGGCGGCGCCATCCTGAGCTTTCTT
TCTCGTCCGATTTCAATGTCCCCGGAGGAGAGTGGCGAGCGTAATTTGTT
TCTCTCGACGTCGGCAGCCTATCCACCAGCCACGCCGAAAGATCCATCCC
AGCTGGGGGTTCCCTTGGTCAAAGGGGTGGACACGGCGTCTGCATCAACT
GGCAAAGTCGGCGGAGGTTCATATATTCTTAAATACGATGGGAGTAATGC
AACCCGGGAGAAATTGATGGCTGATTATCGAGCCAGGAGTTTCCCTAGCA
AAGTTTGGGACCATACACTGGAGACATTCAAGCGGGTGCTGCGGTCAGAC
TGAATGCCCACTCTCAGCCAGGTCCGTCAGTCCAACACGGCCCTGGGCGC
TCAGCGCCAAAAGATGGTCGCCGTCTTCGTGGGAGGCACCAGCGGCATAG
GAGAAGCGACAGCCAAGCAGATGGCGCTCGCTGTAAAACAACCAACCATC
CACCTGGTTGGCCGGAATCCTGCATCCGGTTCCAGAGTCCTAGAGGAGCT
CCGGGCTTCCAATCCAAACGGATCATATAACTTCATTCAATCGGATGTCT
CACTTCTGCGCAGCGTCGACAAAGCCTGTGAGGAAATTACGGACAAGGAA
AAGCAAATTGATCTCCTCTTCATGTCCACCGGTCACCTATCTCTCTCCAA
GAACGAAACCGACGAGGGACTAGACGACAACCATGCCCTTCGTTACTACT
CCCGCATGCGCTTCGTGCAGAATCTCATGCCCTTGCTCAGTGCCTCCCCT
GGTCCAGCCAGGGTCGTATCCATCCTAGCAGGCGGCCAAGAAGGCACCAT
GGAAGAAGACAATTTCGACCTGACGAAATCTTGGAGTTTTACGAAAGCAA
ACACATACGCCGCCACCTTAAACTCGCTAGCGATAGAGCATCTAGCCACC
GCCCATCCGACCGTAAGCTTTCTACACGTCTTCCCGGGTATTGTACGGAC
TCCATTGATGAACGCCTCCTTCGGAAATTACGGCGGCGCCATCCTGAGCT
TTCTTTCTCGTCCGATTTCAATGTCCCCGGAGGAGAGTGGCGAGCGTAAT
TTGTTTCTCTCGACGTCGGCAGCCTATCCACCAGCCACGCCGAAAGATCC
ATCCCAGCTGGGGGTTCCCTTGGTCAAAGGGGTGGACACGGCGTCTGCAT
CAACTGGCAAAGTCGGCGGAGGTTCATATATTCTTAAATACGATGGGAGT
AATGCAACCCGGGAGAAATTGATGGCTGATTATCGAGCCAGGAGTTTCCC
TAGCAAAGTTTGGGACCATACACTGGAGACATTCAAGCGGGTGCTGCGGT
CAGACTGAATGCCCACTCTCAGCCAGGTCCGTCAGTCCAACACGGCCCTG
GGCGCTCAGCGCCAAAAGATGGTCGCCGTCTTCGTGGGAGGCACCAGCGG
CATAGGAGAAGCGACAGCCAAGCAGATGGCGCTCGCTGTAAAACAACCAA
CCATCCACCTGGTTGGCCGGAATCCTGCATCCGGTTCCAGAGTCCTAGAG
GAGCTCCGGGCTTCCAATCCAAACGGATCATATAACTTCATTCAATCGGA
TGTCTCACTTCTGCGCAGCGTCGACAAAGCCTGTGAGGAAATTACGGACA
AGGAAAAGCAAATTGATCTCCTCTTCATGTCCACCGGTCACCTATCTCTC
TCCAAGAACG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003175KJC3_003175Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003175-T1KJC3_003175-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003175-T1.cdsKJC3_003175-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003175-T1.utr3p1KJC3_003175-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003175-T1.exon2KJC3_003175-T1.exon2Aspergillus niger KJC3exon
KJC3_003175-T1.exon1KJC3_003175-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003175-T1.utr5p1KJC3_003175-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1153306..1154573 -
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