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KJC3_003177-T1, KJC3_003177-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003177-T1
Unique NameKJC3_003177-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1159093..1160346+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003177-T1 ID=KJC3_003177-T1|Name=KJC3_003177-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1254bp|location=Sequence derived from alignment at ch3:1159093..1160346+ (Aspergillus niger KJC3)
CTCGATAGGCGTAAAGCACGCGACTAAAACAGCGCCGGTCGAGACTAAGC
CCAAACTTGTTCAATCTATACCATATATCCAGTCCTATCCACAGAGTGGC
CCAAATTCTCCATTCCATCGCCAATTCCTCACAACACCTCGACCATCACT
CCGCCCACTTCCGGCCAATCGATAAAAAATTAGTCCAAAGTTAAATCTAC
ACCATGGAATCTCCTAGCGCAGCCTGGACCGCCCAAATGGAGCGTATCAC
CGTCCTGGAACAAGACCGGTCGCTACTTAATCTAATGACCATCATCCGGG
ACGTGAATACCAATGATCGGGATTTCTCCGCTGCGGTGGAGAAGGTTGTT
CGCCGGTTGATTACGTCCGGTACGTATTACCCTAAATTCAACCATCAATT
TATGTTTGGAACGACGGCTCAAGTGAATGTATAGCATTGGGCCACGTCCC
CGCTGAAGAATACACTGTTACTACACCCATCAACAAGCCCTACACCGGAA
TCCGGTTCACGAAGGGTGTCTGCGGTGTCAGTATCCTCCGTGCTGGAGCT
TGCATGGAGCAGGCGCTGCGGGATACCTGGACGTGAGTGTTTCCTTCACG
TACTTGGGGAAGTGTTCAAGTGCACTAATTAGAAATGTACAGTGGTCCGC
TTAGTTTCGGTAAGCTGCTCATCCAGCGCGATGAGGAAACGAGCATCGCC
AAGATTTATTACTCGAAGCTGCCGGCGGGAATTACGGATGATGGTATGTT
TCGTCCCTTAGCAAATGATTTGTTGGTTAGCAGAAAAGGAAAACGCACTA
ACAATGATCAAGTTGTCCTGCTCCTGGAACCTATGCTCGCCACCGGCGGA
TCTGTGATCAAAGCTGTGGAGAACCTGACGAGCAATGGCGTTCCTGAGGA
ATCTATTGTGCTTGTCAATGTGGTGTCGTCGCAGAAGGGTCTAGATGTTA
TTTCCGGAAAGTTTCCGGGTCTGAAGGTTGTTGCTGCGGCGGTGGATGCG
GAGTTGACTGCTCAGAAGTAAGTGTGCTGAATGAAACTGAAGGTAGACCG
CTTGCTGACTATGCTATAGCTACATTAGCCCTGGTCTGGGAGACTTCGGT
GACAGGTACTATGGAACGACTCATTAGGAGTGGTCTTGGTTTCGTTTAGG
GTTTAGACTGTCTGTTGGGATGTACAGGTGATGGGTTGGGTCTGCGTGTT
CCAGGGATTTGTAAATATTCTTTCTGTTATATAAAGGATGGCTGCTTTGC
GTCG
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Coding sequence (CDS) from alignment at ch3:1159093..1160346+

>KJC3_003177-T1 ID=KJC3_003177-T1|Name=KJC3_003177-T1|organism=Aspergillus niger KJC3|type=CDS|length=3390bp|location=Sequence derived from alignment at ch3:1159093..1160346+ (Aspergillus niger KJC3)
ATGGAATCTCCTAGCGCAGCCTGGACCGCCCAAATGGAGCGTATCACCGT
CCTGGAACAAGACCGGTCGCTACTTAATCTAATGACCATCATCCGGGACG
TGAATACCAATGATCGGGATTTCTCCGCTGCGGTGGAGAAGGTTGTTCGC
CGGTTGATTACGTCCGCATTGGGCCACGTCCCCGCTGAAGAATACACTGT
TACTACACCCATCAACAAGCCCTACACCGGAATCCGGTTCACGAAGGGTG
TCTGCGGTGTCAGTATCCTCCGTGCTGGAGCTTGCATGGAGCAGGCGCTG
CGGGATACCTGGACTGGTCCGCTTAGTTTCGGTAAGCTGCTCATCCAGCG
CGATGAGGAAACGAGCATCGCCAAGATTTATTACTCGAAGCTGCCGGCGG
GAATTACGGATGATGTTGTCCTGCTCCTGGAACCTATGCTCGCCACCGGC
GGATCTGTGATCAAAGCTGTGGAGAACCTGACGAGCAATGGCGTTCCTGA
GGAATCTATTGTGCTTGTCAATGTGGTGTCGTCGCAGAAGGGTCTAGATG
TTATTTCCGGAAAGTTTCCGGGTCTGAAGGTTGTTGCTGCGGCGGTGGAT
GCGGAGTTGACTGCTCAGAACTACATTAGCCCTGGTCTGGGAGACTTCGG
TGACAGGTACTATGGAACGACTCATTAGATGGAATCTCCTAGCGCAGCCT
GGACCGCCCAAATGGAGCGTATCACCGTCCTGGAACAAGACCGGTCGCTA
CTTAATCTAATGACCATCATCCGGGACGTGAATACCAATGATCGGGATTT
CTCCGCTGCGGTGGAGAAGGTTGTTCGCCGGTTGATTACGTCCGCATTGG
GCCACGTCCCCGCTGAAGAATACACTGTTACTACACCCATCAACAAGCCC
TACACCGGAATCCGGTTCACGAAGGGTGTCTGCGGTGTCAGTATCCTCCG
TGCTGGAGCTTGCATGGAGCAGGCGCTGCGGGATACCTGGACTGGTCCGC
TTAGTTTCGGTAAGCTGCTCATCCAGCGCGATGAGGAAACGAGCATCGCC
AAGATTTATTACTCGAAGCTGCCGGCGGGAATTACGGATGATGTTGTCCT
GCTCCTGGAACCTATGCTCGCCACCGGCGGATCTGTGATCAAAGCTGTGG
AGAACCTGACGAGCAATGGCGTTCCTGAGGAATCTATTGTGCTTGTCAAT
GTGGTGTCGTCGCAGAAGGGTCTAGATGTTATTTCCGGAAAGTTTCCGGG
TCTGAAGGTTGTTGCTGCGGCGGTGGATGCGGAGTTGACTGCTCAGAACT
ACATTAGCCCTGGTCTGGGAGACTTCGGTGACAGGTACTATGGAACGACT
CATTAGATGGAATCTCCTAGCGCAGCCTGGACCGCCCAAATGGAGCGTAT
CACCGTCCTGGAACAAGACCGGTCGCTACTTAATCTAATGACCATCATCC
GGGACGTGAATACCAATGATCGGGATTTCTCCGCTGCGGTGGAGAAGGTT
GTTCGCCGGTTGATTACGTCCGCATTGGGCCACGTCCCCGCTGAAGAATA
CACTGTTACTACACCCATCAACAAGCCCTACACCGGAATCCGGTTCACGA
AGGGTGTCTGCGGTGTCAGTATCCTCCGTGCTGGAGCTTGCATGGAGCAG
GCGCTGCGGGATACCTGGACTGGTCCGCTTAGTTTCGGTAAGCTGCTCAT
CCAGCGCGATGAGGAAACGAGCATCGCCAAGATTTATTACTCGAAGCTGC
CGGCGGGAATTACGGATGATGTTGTCCTGCTCCTGGAACCTATGCTCGCC
ACCGGCGGATCTGTGATCAAAGCTGTGGAGAACCTGACGAGCAATGGCGT
TCCTGAGGAATCTATTGTGCTTGTCAATGTGGTGTCGTCGCAGAAGGGTC
TAGATGTTATTTCCGGAAAGTTTCCGGGTCTGAAGGTTGTTGCTGCGGCG
GTGGATGCGGAGTTGACTGCTCAGAACTACATTAGCCCTGGTCTGGGAGA
CTTCGGTGACAGGTACTATGGAACGACTCATTAGATGGAATCTCCTAGCG
CAGCCTGGACCGCCCAAATGGAGCGTATCACCGTCCTGGAACAAGACCGG
TCGCTACTTAATCTAATGACCATCATCCGGGACGTGAATACCAATGATCG
GGATTTCTCCGCTGCGGTGGAGAAGGTTGTTCGCCGGTTGATTACGTCCG
CATTGGGCCACGTCCCCGCTGAAGAATACACTGTTACTACACCCATCAAC
AAGCCCTACACCGGAATCCGGTTCACGAAGGGTGTCTGCGGTGTCAGTAT
CCTCCGTGCTGGAGCTTGCATGGAGCAGGCGCTGCGGGATACCTGGACTG
GTCCGCTTAGTTTCGGTAAGCTGCTCATCCAGCGCGATGAGGAAACGAGC
ATCGCCAAGATTTATTACTCGAAGCTGCCGGCGGGAATTACGGATGATGT
TGTCCTGCTCCTGGAACCTATGCTCGCCACCGGCGGATCTGTGATCAAAG
CTGTGGAGAACCTGACGAGCAATGGCGTTCCTGAGGAATCTATTGTGCTT
GTCAATGTGGTGTCGTCGCAGAAGGGTCTAGATGTTATTTCCGGAAAGTT
TCCGGGTCTGAAGGTTGTTGCTGCGGCGGTGGATGCGGAGTTGACTGCTC
AGAACTACATTAGCCCTGGTCTGGGAGACTTCGGTGACAGGTACTATGGA
ACGACTCATTAGATGGAATCTCCTAGCGCAGCCTGGACCGCCCAAATGGA
GCGTATCACCGTCCTGGAACAAGACCGGTCGCTACTTAATCTAATGACCA
TCATCCGGGACGTGAATACCAATGATCGGGATTTCTCCGCTGCGGTGGAG
AAGGTTGTTCGCCGGTTGATTACGTCCGCATTGGGCCACGTCCCCGCTGA
AGAATACACTGTTACTACACCCATCAACAAGCCCTACACCGGAATCCGGT
TCACGAAGGGTGTCTGCGGTGTCAGTATCCTCCGTGCTGGAGCTTGCATG
GAGCAGGCGCTGCGGGATACCTGGACTGGTCCGCTTAGTTTCGGTAAGCT
GCTCATCCAGCGCGATGAGGAAACGAGCATCGCCAAGATTTATTACTCGA
AGCTGCCGGCGGGAATTACGGATGATGTTGTCCTGCTCCTGGAACCTATG
CTCGCCACCGGCGGATCTGTGATCAAAGCTGTGGAGAACCTGACGAGCAA
TGGCGTTCCTGAGGAATCTATTGTGCTTGTCAATGTGGTGTCGTCGCAGA
AGGGTCTAGATGTTATTTCCGGAAAGTTTCCGGGTCTGAAGGTTGTTGCT
GCGGCGGTGGATGCGGAGTTGACTGCTCAGAACTACATTAGCCCTGGTCT
GGGAGACTTCGGTGACAGGTACTATGGAACGACTCATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009116nucleoside metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003177KJC3_003177Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003177-T1KJC3_003177-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003177-T1.utr5p1KJC3_003177-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003177-T1.exon1KJC3_003177-T1.exon1Aspergillus niger KJC3exon
KJC3_003177-T1.exon2KJC3_003177-T1.exon2Aspergillus niger KJC3exon
KJC3_003177-T1.exon3KJC3_003177-T1.exon3Aspergillus niger KJC3exon
KJC3_003177-T1.exon4KJC3_003177-T1.exon4Aspergillus niger KJC3exon
KJC3_003177-T1.exon5KJC3_003177-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003177-T1.cdsKJC3_003177-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003177-T1.utr3p1KJC3_003177-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR000836
DBxrefInterPro:IPR029057
DBxrefPFAM:PF14681
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1159093..1160346 +
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