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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1160631..1161434- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003178-T1 ID=KJC3_003178-T1|Name=KJC3_003178-T1|organism=Aspergillus niger KJC3|type=mRNA|length=804bp|location=Sequence derived from alignment at ch3:1160631..1161434- (Aspergillus niger KJC3)
CACGGTAATCATATCGTTCTATATCTTGCCAGGGCCAATGTATTTATAGC
CGAACATCATCCACTACATTCCAGCTTAAGCGTACATTCCCATTCATTTC
TCTTCTCAATACCGCAATACCAACCCACTGTATCCATCATGACCGTCGCA
CTACCCGCCAATGTTGATCAACCTCAAAGTGACACTTTCACATCCCTTCT
CTCACAACTTAGGGATCGATCTCTCAAACCCTCCAAAGTGCGCAGCCTAG
TGCGCGACATGACAGCGACCATAACAAAGAGCCTCCACATCGACGCACCC
AAGGACGAAACAATAGCTATCATCGTGGTGCTCCGCTCCGGTCTGGCTAT
GTTCGATGGCTTCGTGGACAACATTCCTGAAGATGTATCTACGACCGTCT
ATCACATGGGCATATTCAGAGATCAAGCATCATTGCAGCCGGTTGAGTAT
TACAATAAGTTACCCGTGAAGCCGGCACATATCAAGCAGGCCTATATTCT
GGATCCGTTGATTGCCACGGGTGGTACGGCCGCGGCAGTCATCAGCATAT
TGAAGTAAGTTCCCAAGATATTGTGATCTTTAGGAAATTACTAATTTGAT
TATGTCAGGGATTGGGGAATTGAGAAGGTTACATTCCTTTCTGTGTTGTC
TACTCCGGTTGGCTTGGAGCATGCAGCTGCCGTGTGGCCCGAGGGTAGCC
GGTTTGTGATGGGTGCGGTTGATCCTGAGGTAGATGCGAAGGGGTATGTT
CAGCCTGGGGTTGGGGATATTGGGGATAGGCTTTATGGGACTGCATTCGA
TTAG back to topCoding sequence (CDS) from alignment at ch3:1160631..1161434- >KJC3_003178-T1 ID=KJC3_003178-T1|Name=KJC3_003178-T1|organism=Aspergillus niger KJC3|type=CDS|length=1224bp|location=Sequence derived from alignment at ch3:1160631..1161434- (Aspergillus niger KJC3)
GGATTGGGGAATTGAGAAGGTTACATTCCTTTCTGTGTTGTCTACTCCGG
TTGGCTTGGAGCATGCAGCTGCCGTGTGGCCCGAGGGTAGCCGGTTTGTG
ATGGGTGCGGTTGATCCTGAGGTAGATGCGAAGGGGTATGTTCAGCCTGG
GGTTGGGGATATTGGGGATAGGCTTTATGGGACTGCATTCGATTAGATGA
CCGTCGCACTACCCGCCAATGTTGATCAACCTCAAAGTGACACTTTCACA
TCCCTTCTCTCACAACTTAGGGATCGATCTCTCAAACCCTCCAAAGTGCG
CAGCCTAGTGCGCGACATGACAGCGACCATAACAAAGAGCCTCCACATCG
ACGCACCCAAGGACGAAACAATAGCTATCATCGTGGTGCTCCGCTCCGGT
CTGGCTATGTTCGATGGCTTCGTGGACAACATTCCTGAAGATGTATCTAC
GACCGTCTATCACATGGGCATATTCAGAGATCAAGCATCATTGCAGCCGG
TTGAGTATTACAATAAGTTACCCGTGAAGCCGGCACATATCAAGCAGGCC
TATATTCTGGATCCGTTGATTGCCACGGGTGGTACGGCCGCGGCAGTCAT
CAGCATATTGAAGGATTGGGGAATTGAGAAGGTTACATTCCTTTCTGTGT
TGTCTACTCCGGTTGGCTTGGAGCATGCAGCTGCCGTGTGGCCCGAGGGT
AGCCGGTTTGTGATGGGTGCGGTTGATCCTGAGGTAGATGCGAAGGGGTA
TGTTCAGCCTGGGGTTGGGGATATTGGGGATAGGCTTTATGGGACTGCAT
TCGATTAGATGACCGTCGCACTACCCGCCAATGTTGATCAACCTCAAAGT
GACACTTTCACATCCCTTCTCTCACAACTTAGGGATCGATCTCTCAAACC
CTCCAAAGTGCGCAGCCTAGTGCGCGACATGACAGCGACCATAACAAAGA
GCCTCCACATCGACGCACCCAAGGACGAAACAATAGCTATCATCGTGGTG
CTCCGCTCCGGTCTGGCTATGTTCGATGGCTTCGTGGACAACATTCCTGA
AGATGTATCTACGACCGTCTATCACATGGGCATATTCAGAGATCAAGCAT
CATTGCAGCCGGTTGAGTATTACAATAAGTTACCCGTGAAGCCGGCACAT
ATCAAGCAGGCCTATATTCTGGATCCGTTGATTGCCACGGGTGGTACGGC
CGCGGCAGTCATCAGCATATTGAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009116 | nucleoside metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003178-T1.utr5p1 | KJC3_003178-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000836 |
| DBxref | InterPro:IPR029057 |
| DBxref | PFAM:PF14681 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1160631..1161434 - |
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