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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1161588..1163225+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003179-T1 ID=KJC3_003179-T1|Name=KJC3_003179-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1638bp|location=Sequence derived from alignment at ch3:1161588..1163225+ (Aspergillus niger KJC3)
AACACATCTGTCTTCTCTTTGTATCGAAGAAAGACCTTCTATCGCATATT
CTCAGCTTGAAATATCTTCATACCGAGAAAGCACGATGGATTCCAGCACC
CGACACTTGCTTCGTCTAGAAGCCGTACGCGAGAGAGCGAACATCGTCTT
CCGCCTTGCTGAACAAGGAAAGCTGCACCACTACGACTACCACCCTGAGC
GGCTCGATGCGACCGTCGACTACGTTGCAGGCATAATCCAGGTATATACC
CTCATATGTATCAAGAAGTAACCACTAATAATGTACCCAGCGCGACTTCG
GCCCGGACCGCTACGACCAAATCCCTCCCCACGGTCGCTGGCAGCACTTC
GACGTAGGCGGAGTGCCTCGAATCCAGAAACTGATCGAGCGATGGGATGC
ATCTGGATATGATGATAAAGAGAAAGTTAGAAGTCTGTTGGATCTATTCT
TTGTCTCCGTTCTTCTCGATGCCGGTGCGGGAGACACTTGGCGTTATGTG
GAGAAAGAGACCGGGGCCATGTTCAACCGCAGTGAGGGTATCGCGGTCGC
ATCGCTGTATATGTTCTTGAACGGTGACTTTGCCAACAAGGACTCGGAAA
GGAAGGATGTTGTGCATGGTACGTGCTGTTTATGCCGTTGACAGGCAGAA
GTCGTTACTCACTATGAACAGGAGAGGCTCTGCGAACTCTTAGCGTGGAC
AAACTCCTTCGCGGCTTTCAAGTCGATGATTCCAGCAACCCACTTCTTGG
AGCTTCTGCTCGGGTCCAGATTCTCCAGAAACTGGGTGAGTCGCTGAGAA
ATCTCCCTGAGATCTTTGGGCCGTCCGGCCGCCCTGGGCAAATCGCAGGT
CAGTTACCAGTCGACGCAATAGATTACCCAGCAACTAATTTAATTTGTAG
ACTACCTGGCTACGAGCAAAGGGTCCCTAGACTACTCGGTTCTTTGGGAC
GTCCTACAGAAAACCCTCATCCCCATCTGGCCATCCGACCGCACCAAAGT
GAACGGTTACCCTATCGGCGACGCCTGGCCACTCGCCGTGCTTGCAGAGC
ATTCACCATCCTCGGCTACAGACGGTATTCAACCCTTCCACAAGCTGACA
CAATGGCTCGCATACTCCCTCAAAGTACCATTTGAGCGACTTCTCTCCCT
GAAATGGCAGAACGCAGAGCTAGGAACCGGACTCCCGGAGTATCGCAACG
GTGGCTTGTTCATAGATATGGGCGTGTTGACGCTTAAGCCTGAGGCACAG
GAGCGGGGACTACGCACGTCTGGAGGAAGCCTTCCGTGTTTTGCAGTTGG
AGACGGCGAAATCGTAGAGTGGCGGGCCATGACTGTTGCTTTGCTTGATA
AGCTGCATGAACAGATTTTGCAGAGCGGGAAGTTCGGGGATATCCAGTTG
TCATTGCCGCAGATGTTGGAGGCAGGATCATGGAAGGCGGGCAGGGAGCT
GGCGGCGAAGTACAGGCCTGAGACGAAGTCGAGTCCAATTTTGAATTCTG
GAGATGGTACTTTATTCTAGATGCTAGGCAGATAGTGCAACAAGAATGCT
GTTCTCTTACTATATGCTGGTATAGTAGCTGCTGTACTGCATAGATTTCA
GATATCCTTCAGAAACACTCCACCTTCGCTTTGAACAC back to topCoding sequence (CDS) from alignment at ch3:1161588..1163225+ >KJC3_003179-T1 ID=KJC3_003179-T1|Name=KJC3_003179-T1|organism=Aspergillus niger KJC3|type=CDS|length=5124bp|location=Sequence derived from alignment at ch3:1161588..1163225+ (Aspergillus niger KJC3)
ATGGATTCCAGCACCCGACACTTGCTTCGTCTAGAAGCCGTACGCGAGAG
AGCGAACATCGTCTTCCGCCTTGCTGAACAAGGAAAGCTGCACCACTACG
ACTACCACCCTGAGCGGCTCGATGCGACCGTCGACTACGTTGCAGGCATA
ATCCAGCGCGACTTCGGCCCGGACCGCTACGACCAAATCCCTCCCCACGG
TCGCTGGCAGCACTTCGACGTAGGCGGAGTGCCTCGAATCCAGAAACTGA
TCGAGCGATGGGATGCATCTGGATATGATGATAAAGAGAAAGTTAGAAGT
CTGTTGGATCTATTCTTTGTCTCCGTTCTTCTCGATGCCGGTGCGGGAGA
CACTTGGCGTTATGTGGAGAAAGAGACCGGGGCCATGTTCAACCGCAGTG
AGGGTATCGCGGTCGCATCGCTGTATATGTTCTTGAACGGTGACTTTGCC
AACAAGGACTCGGAAAGGAAGGATGTTGTGCATGGAGAGGCTCTGCGAAC
TCTTAGCGTGGACAAACTCCTTCGCGGCTTTCAAGTCGATGATTCCAGCA
ACCCACTTCTTGGAGCTTCTGCTCGGGTCCAGATTCTCCAGAAACTGGGT
GAGTCGCTGAGAAATCTCCCTGAGATCTTTGGGCCGTCCGGCCGCCCTGG
GCAAATCGCAGACTACCTGGCTACGAGCAAAGGGTCCCTAGACTACTCGG
TTCTTTGGGACGTCCTACAGAAAACCCTCATCCCCATCTGGCCATCCGAC
CGCACCAAAGTGAACGGTTACCCTATCGGCGACGCCTGGCCACTCGCCGT
GCTTGCAGAGCATTCACCATCCTCGGCTACAGACGGTATTCAACCCTTCC
ACAAGCTGACACAATGGCTCGCATACTCCCTCAAAGTACCATTTGAGCGA
CTTCTCTCCCTGAAATGGCAGAACGCAGAGCTAGGAACCGGACTCCCGGA
GTATCGCAACGGTGGCTTGTTCATAGATATGGGCGTGTTGACGCTTAAGC
CTGAGGCACAGGAGCGGGGACTACGCACGTCTGGAGGAAGCCTTCCGTGT
TTTGCAGTTGGAGACGGCGAAATCGTAGAGTGGCGGGCCATGACTGTTGC
TTTGCTTGATAAGCTGCATGAACAGATTTTGCAGAGCGGGAAGTTCGGGG
ATATCCAGTTGTCATTGCCGCAGATGTTGGAGGCAGGATCATGGAAGGCG
GGCAGGGAGCTGGCGGCGAAGTACAGGCCTGAGACGAAGTCGAGTCCAAT
TTTGAATTCTGGAGATGGTACTTTATTCTAGATGGATTCCAGCACCCGAC
ACTTGCTTCGTCTAGAAGCCGTACGCGAGAGAGCGAACATCGTCTTCCGC
CTTGCTGAACAAGGAAAGCTGCACCACTACGACTACCACCCTGAGCGGCT
CGATGCGACCGTCGACTACGTTGCAGGCATAATCCAGCGCGACTTCGGCC
CGGACCGCTACGACCAAATCCCTCCCCACGGTCGCTGGCAGCACTTCGAC
GTAGGCGGAGTGCCTCGAATCCAGAAACTGATCGAGCGATGGGATGCATC
TGGATATGATGATAAAGAGAAAGTTAGAAGTCTGTTGGATCTATTCTTTG
TCTCCGTTCTTCTCGATGCCGGTGCGGGAGACACTTGGCGTTATGTGGAG
AAAGAGACCGGGGCCATGTTCAACCGCAGTGAGGGTATCGCGGTCGCATC
GCTGTATATGTTCTTGAACGGTGACTTTGCCAACAAGGACTCGGAAAGGA
AGGATGTTGTGCATGGAGAGGCTCTGCGAACTCTTAGCGTGGACAAACTC
CTTCGCGGCTTTCAAGTCGATGATTCCAGCAACCCACTTCTTGGAGCTTC
TGCTCGGGTCCAGATTCTCCAGAAACTGGGTGAGTCGCTGAGAAATCTCC
CTGAGATCTTTGGGCCGTCCGGCCGCCCTGGGCAAATCGCAGACTACCTG
GCTACGAGCAAAGGGTCCCTAGACTACTCGGTTCTTTGGGACGTCCTACA
GAAAACCCTCATCCCCATCTGGCCATCCGACCGCACCAAAGTGAACGGTT
ACCCTATCGGCGACGCCTGGCCACTCGCCGTGCTTGCAGAGCATTCACCA
TCCTCGGCTACAGACGGTATTCAACCCTTCCACAAGCTGACACAATGGCT
CGCATACTCCCTCAAAGTACCATTTGAGCGACTTCTCTCCCTGAAATGGC
AGAACGCAGAGCTAGGAACCGGACTCCCGGAGTATCGCAACGGTGGCTTG
TTCATAGATATGGGCGTGTTGACGCTTAAGCCTGAGGCACAGGAGCGGGG
ACTACGCACGTCTGGAGGAAGCCTTCCGTGTTTTGCAGTTGGAGACGGCG
AAATCGTAGAGTGGCGGGCCATGACTGTTGCTTTGCTTGATAAGCTGCAT
GAACAGATTTTGCAGAGCGGGAAGTTCGGGGATATCCAGTTGTCATTGCC
GCAGATGTTGGAGGCAGGATCATGGAAGGCGGGCAGGGAGCTGGCGGCGA
AGTACAGGCCTGAGACGAAGTCGAGTCCAATTTTGAATTCTGGAGATGGT
ACTTTATTCTAGATGGATTCCAGCACCCGACACTTGCTTCGTCTAGAAGC
CGTACGCGAGAGAGCGAACATCGTCTTCCGCCTTGCTGAACAAGGAAAGC
TGCACCACTACGACTACCACCCTGAGCGGCTCGATGCGACCGTCGACTAC
GTTGCAGGCATAATCCAGCGCGACTTCGGCCCGGACCGCTACGACCAAAT
CCCTCCCCACGGTCGCTGGCAGCACTTCGACGTAGGCGGAGTGCCTCGAA
TCCAGAAACTGATCGAGCGATGGGATGCATCTGGATATGATGATAAAGAG
AAAGTTAGAAGTCTGTTGGATCTATTCTTTGTCTCCGTTCTTCTCGATGC
CGGTGCGGGAGACACTTGGCGTTATGTGGAGAAAGAGACCGGGGCCATGT
TCAACCGCAGTGAGGGTATCGCGGTCGCATCGCTGTATATGTTCTTGAAC
GGTGACTTTGCCAACAAGGACTCGGAAAGGAAGGATGTTGTGCATGGAGA
GGCTCTGCGAACTCTTAGCGTGGACAAACTCCTTCGCGGCTTTCAAGTCG
ATGATTCCAGCAACCCACTTCTTGGAGCTTCTGCTCGGGTCCAGATTCTC
CAGAAACTGGGTGAGTCGCTGAGAAATCTCCCTGAGATCTTTGGGCCGTC
CGGCCGCCCTGGGCAAATCGCAGACTACCTGGCTACGAGCAAAGGGTCCC
TAGACTACTCGGTTCTTTGGGACGTCCTACAGAAAACCCTCATCCCCATC
TGGCCATCCGACCGCACCAAAGTGAACGGTTACCCTATCGGCGACGCCTG
GCCACTCGCCGTGCTTGCAGAGCATTCACCATCCTCGGCTACAGACGGTA
TTCAACCCTTCCACAAGCTGACACAATGGCTCGCATACTCCCTCAAAGTA
CCATTTGAGCGACTTCTCTCCCTGAAATGGCAGAACGCAGAGCTAGGAAC
CGGACTCCCGGAGTATCGCAACGGTGGCTTGTTCATAGATATGGGCGTGT
TGACGCTTAAGCCTGAGGCACAGGAGCGGGGACTACGCACGTCTGGAGGA
AGCCTTCCGTGTTTTGCAGTTGGAGACGGCGAAATCGTAGAGTGGCGGGC
CATGACTGTTGCTTTGCTTGATAAGCTGCATGAACAGATTTTGCAGAGCG
GGAAGTTCGGGGATATCCAGTTGTCATTGCCGCAGATGTTGGAGGCAGGA
TCATGGAAGGCGGGCAGGGAGCTGGCGGCGAAGTACAGGCCTGAGACGAA
GTCGAGTCCAATTTTGAATTCTGGAGATGGTACTTTATTCTAGATGGATT
CCAGCACCCGACACTTGCTTCGTCTAGAAGCCGTACGCGAGAGAGCGAAC
ATCGTCTTCCGCCTTGCTGAACAAGGAAAGCTGCACCACTACGACTACCA
CCCTGAGCGGCTCGATGCGACCGTCGACTACGTTGCAGGCATAATCCAGC
GCGACTTCGGCCCGGACCGCTACGACCAAATCCCTCCCCACGGTCGCTGG
CAGCACTTCGACGTAGGCGGAGTGCCTCGAATCCAGAAACTGATCGAGCG
ATGGGATGCATCTGGATATGATGATAAAGAGAAAGTTAGAAGTCTGTTGG
ATCTATTCTTTGTCTCCGTTCTTCTCGATGCCGGTGCGGGAGACACTTGG
CGTTATGTGGAGAAAGAGACCGGGGCCATGTTCAACCGCAGTGAGGGTAT
CGCGGTCGCATCGCTGTATATGTTCTTGAACGGTGACTTTGCCAACAAGG
ACTCGGAAAGGAAGGATGTTGTGCATGGAGAGGCTCTGCGAACTCTTAGC
GTGGACAAACTCCTTCGCGGCTTTCAAGTCGATGATTCCAGCAACCCACT
TCTTGGAGCTTCTGCTCGGGTCCAGATTCTCCAGAAACTGGGTGAGTCGC
TGAGAAATCTCCCTGAGATCTTTGGGCCGTCCGGCCGCCCTGGGCAAATC
GCAGACTACCTGGCTACGAGCAAAGGGTCCCTAGACTACTCGGTTCTTTG
GGACGTCCTACAGAAAACCCTCATCCCCATCTGGCCATCCGACCGCACCA
AAGTGAACGGTTACCCTATCGGCGACGCCTGGCCACTCGCCGTGCTTGCA
GAGCATTCACCATCCTCGGCTACAGACGGTATTCAACCCTTCCACAAGCT
GACACAATGGCTCGCATACTCCCTCAAAGTACCATTTGAGCGACTTCTCT
CCCTGAAATGGCAGAACGCAGAGCTAGGAACCGGACTCCCGGAGTATCGC
AACGGTGGCTTGTTCATAGATATGGGCGTGTTGACGCTTAAGCCTGAGGC
ACAGGAGCGGGGACTACGCACGTCTGGAGGAAGCCTTCCGTGTTTTGCAG
TTGGAGACGGCGAAATCGTAGAGTGGCGGGCCATGACTGTTGCTTTGCTT
GATAAGCTGCATGAACAGATTTTGCAGAGCGGGAAGTTCGGGGATATCCA
GTTGTCATTGCCGCAGATGTTGGAGGCAGGATCATGGAAGGCGGGCAGGG
AGCTGGCGGCGAAGTACAGGCCTGAGACGAAGTCGAGTCCAATTTTGAAT
TCTGGAGATGGTACTTTATTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003179-T1.utr5p1 | KJC3_003179-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003179-T1.utr3p1 | KJC3_003179-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012469 |
| DBxref | PFAM:PF07958 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1161588..1163225 + |
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