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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1163481..1165275+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003180-T1 ID=KJC3_003180-T1|Name=KJC3_003180-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1795bp|location=Sequence derived from alignment at ch3:1163481..1165275+ (Aspergillus niger KJC3)
CCAGATAGTCAGAAAGCGGAAACACCCTATCGTTTAATCATCTCAGAACT
TCATTTATGCGAGAGAACCTTTGAGCACAGGTCGACATATAAACCCATCG
CTCCCCTTCAACAACTCTCAATCATCACGTCTCGTACACCATTCACCTCA
ACTAACTCCCTCATCGTTTCCTCCACATCACACCACCACCATGCCAACAG
CAACACAAGAACCCCCCTCCAAAACGGAGTCCTACAGCAACCGCATAGTC
GTAAGCCTCCCCTCCTCTCCTCCCACCCCAACTCCAACCAATTTAATTCA
ATAACTAACTCCACCACAGCTAACAACCTACCCCTCCCAAAGTGTCGCCA
ACCCCATCCCCCTAACCTGGGGTTCCTCCACCCCCGAAACCCGCGGTCCC
GTCATCGTCTCCCGCAGCAAAAACACCCTCAGCAAGCGCAACGCGATCGG
TGCCCACGGCGGCAGCTACTCATTCTACACCGCGCTCGCCATCGCCTCAG
GGGACCTCGAGCCCGACTTCCGCCCGAACTTCCTCAACACGCAGCCGACA
TTTAACTTCCCTTACCAGGATGCATGGGGAGACAAGAGCAAGATCGTCTC
AATGGACCCATTCGGACACGATATCGTCAAACACTACGGGAAGTATCTAG
AAGAGGGCATAGACGTACGGCCAACCATCGCTGTGACGCGAGCGACGATG
CGTGTCTCTGAGATCACGGATGCGATTGCGCGGGGAAGGATCCCCATTGA
TGGGAACATCGTTCTCAACTCGGGCGGAGACGTCAAGGTTACGAAAGTAG
CCGTGGAACCAGTGTGGTATCTCCCCGGTGTGGCTGATCGATTCGGCGTG
TCGGAGAAGGATCTGCGCCGGGCGTTGTTCGAACATACGGGGGGCAGTTA
TCCGGAGTTGATTACGAGACCTGACATGAAGGTATTCCTTCCGCCGATTG
GCGGACTGACGGTTTACATCTTTGGGCCTCCTGAACGGGTATCTGATCCG
GAGATGCGGCTGGCGCTGCGCATTCACGATGAGTGTAATGGGTCGGATGT
GTTTCAGTCGGATATTTGTACGTGTCGGCCGTATCTGACCTTTGGAATTG
AGGAGGCGATTAAGGAGGCGCAGGGAGGTGGGAGTGGAGTGGTGATTTAT
TTCCGCAAGGAAGGGCGGGCGCTGGGTGAGGTGGTTAAGTATTTGGTGTA
TAATTCGAGGAAGAGGGGTGGGGATACCGCCGATAAGTATTTTCAGAGGA
CGGAGAATATTGCTGGGACTAAGGATGTGAGTATTCTTTCTTCTTCTTTG
GGAGGTGTTAGTGGTGGAGTGGGTGATGCTAATGCGGTTGTAGATGCGGT
TTCAGGCGTTGATGCCGGATATTCTGCATTGGTTGGGCATTACCAAAATT
GATCGCATGCTGTCCATGTCGAACATGAAGCATGATGCGATTGTCGAGCA
GGGGATACCGATCTATGAGCGGGTTCCTATTCCGGATGGTAAGTTGGCTT
GTTCTTGCAGATAAGGAAATTTGACTAACTGGGTTAGATATGATTCCGGA
AGATTCGCGGGTAGAGATCGACGCAAAGATTCACTCTGGGTACTTCTCGG
CTGGAAAGGAGATAACAGAAGAAGACCTCAAGCAAGTTAAGGGACGGGGC
TGGGAGTCTTGGGAGGATGTAACGGTAAGTGAATCCAAACCTGATGAGGA
ATCTATTGACAGCTGACATGTCGTTTAGCATTAATCGGCATTTTTGTATA
CTGCTTAATATAGATATCTTATGAATGCGATCGGATTATTTTGAG back to topCoding sequence (CDS) from alignment at ch3:1163481..1165275+ >KJC3_003180-T1 ID=KJC3_003180-T1|Name=KJC3_003180-T1|organism=Aspergillus niger KJC3|type=CDS|length=6525bp|location=Sequence derived from alignment at ch3:1163481..1165275+ (Aspergillus niger KJC3)
ATGCCAACAGCAACACAAGAACCCCCCTCCAAAACGGAGTCCTACAGCAA
CCGCATAGTCCTAACAACCTACCCCTCCCAAAGTGTCGCCAACCCCATCC
CCCTAACCTGGGGTTCCTCCACCCCCGAAACCCGCGGTCCCGTCATCGTC
TCCCGCAGCAAAAACACCCTCAGCAAGCGCAACGCGATCGGTGCCCACGG
CGGCAGCTACTCATTCTACACCGCGCTCGCCATCGCCTCAGGGGACCTCG
AGCCCGACTTCCGCCCGAACTTCCTCAACACGCAGCCGACATTTAACTTC
CCTTACCAGGATGCATGGGGAGACAAGAGCAAGATCGTCTCAATGGACCC
ATTCGGACACGATATCGTCAAACACTACGGGAAGTATCTAGAAGAGGGCA
TAGACGTACGGCCAACCATCGCTGTGACGCGAGCGACGATGCGTGTCTCT
GAGATCACGGATGCGATTGCGCGGGGAAGGATCCCCATTGATGGGAACAT
CGTTCTCAACTCGGGCGGAGACGTCAAGGTTACGAAAGTAGCCGTGGAAC
CAGTGTGGTATCTCCCCGGTGTGGCTGATCGATTCGGCGTGTCGGAGAAG
GATCTGCGCCGGGCGTTGTTCGAACATACGGGGGGCAGTTATCCGGAGTT
GATTACGAGACCTGACATGAAGGTATTCCTTCCGCCGATTGGCGGACTGA
CGGTTTACATCTTTGGGCCTCCTGAACGGGTATCTGATCCGGAGATGCGG
CTGGCGCTGCGCATTCACGATGAGTGTAATGGGTCGGATGTGTTTCAGTC
GGATATTTGTACGTGTCGGCCGTATCTGACCTTTGGAATTGAGGAGGCGA
TTAAGGAGGCGCAGGGAGGTGGGAGTGGAGTGGTGATTTATTTCCGCAAG
GAAGGGCGGGCGCTGGGTGAGGTGGTTAAGTATTTGGTGTATAATTCGAG
GAAGAGGGGTGGGGATACCGCCGATAAGTATTTTCAGAGGACGGAGAATA
TTGCTGGGACTAAGGATATGCGGTTTCAGGCGTTGATGCCGGATATTCTG
CATTGGTTGGGCATTACCAAAATTGATCGCATGCTGTCCATGTCGAACAT
GAAGCATGATGCGATTGTCGAGCAGGGGATACCGATCTATGAGCGGGTTC
CTATTCCGGATGATATGATTCCGGAAGATTCGCGGGTAGAGATCGACGCA
AAGATTCACTCTGGGTACTTCTCGGCTGGAAAGGAGATAACAGAAGAAGA
CCTCAAGCAAGTTAAGGGACGGGGCTGGGAGTCTTGGGAGGATGTAACGC
ATTAAATGCCAACAGCAACACAAGAACCCCCCTCCAAAACGGAGTCCTAC
AGCAACCGCATAGTCCTAACAACCTACCCCTCCCAAAGTGTCGCCAACCC
CATCCCCCTAACCTGGGGTTCCTCCACCCCCGAAACCCGCGGTCCCGTCA
TCGTCTCCCGCAGCAAAAACACCCTCAGCAAGCGCAACGCGATCGGTGCC
CACGGCGGCAGCTACTCATTCTACACCGCGCTCGCCATCGCCTCAGGGGA
CCTCGAGCCCGACTTCCGCCCGAACTTCCTCAACACGCAGCCGACATTTA
ACTTCCCTTACCAGGATGCATGGGGAGACAAGAGCAAGATCGTCTCAATG
GACCCATTCGGACACGATATCGTCAAACACTACGGGAAGTATCTAGAAGA
GGGCATAGACGTACGGCCAACCATCGCTGTGACGCGAGCGACGATGCGTG
TCTCTGAGATCACGGATGCGATTGCGCGGGGAAGGATCCCCATTGATGGG
AACATCGTTCTCAACTCGGGCGGAGACGTCAAGGTTACGAAAGTAGCCGT
GGAACCAGTGTGGTATCTCCCCGGTGTGGCTGATCGATTCGGCGTGTCGG
AGAAGGATCTGCGCCGGGCGTTGTTCGAACATACGGGGGGCAGTTATCCG
GAGTTGATTACGAGACCTGACATGAAGGTATTCCTTCCGCCGATTGGCGG
ACTGACGGTTTACATCTTTGGGCCTCCTGAACGGGTATCTGATCCGGAGA
TGCGGCTGGCGCTGCGCATTCACGATGAGTGTAATGGGTCGGATGTGTTT
CAGTCGGATATTTGTACGTGTCGGCCGTATCTGACCTTTGGAATTGAGGA
GGCGATTAAGGAGGCGCAGGGAGGTGGGAGTGGAGTGGTGATTTATTTCC
GCAAGGAAGGGCGGGCGCTGGGTGAGGTGGTTAAGTATTTGGTGTATAAT
TCGAGGAAGAGGGGTGGGGATACCGCCGATAAGTATTTTCAGAGGACGGA
GAATATTGCTGGGACTAAGGATATGCGGTTTCAGGCGTTGATGCCGGATA
TTCTGCATTGGTTGGGCATTACCAAAATTGATCGCATGCTGTCCATGTCG
AACATGAAGCATGATGCGATTGTCGAGCAGGGGATACCGATCTATGAGCG
GGTTCCTATTCCGGATGATATGATTCCGGAAGATTCGCGGGTAGAGATCG
ACGCAAAGATTCACTCTGGGTACTTCTCGGCTGGAAAGGAGATAACAGAA
GAAGACCTCAAGCAAGTTAAGGGACGGGGCTGGGAGTCTTGGGAGGATGT
AACGCATTAAATGCCAACAGCAACACAAGAACCCCCCTCCAAAACGGAGT
CCTACAGCAACCGCATAGTCCTAACAACCTACCCCTCCCAAAGTGTCGCC
AACCCCATCCCCCTAACCTGGGGTTCCTCCACCCCCGAAACCCGCGGTCC
CGTCATCGTCTCCCGCAGCAAAAACACCCTCAGCAAGCGCAACGCGATCG
GTGCCCACGGCGGCAGCTACTCATTCTACACCGCGCTCGCCATCGCCTCA
GGGGACCTCGAGCCCGACTTCCGCCCGAACTTCCTCAACACGCAGCCGAC
ATTTAACTTCCCTTACCAGGATGCATGGGGAGACAAGAGCAAGATCGTCT
CAATGGACCCATTCGGACACGATATCGTCAAACACTACGGGAAGTATCTA
GAAGAGGGCATAGACGTACGGCCAACCATCGCTGTGACGCGAGCGACGAT
GCGTGTCTCTGAGATCACGGATGCGATTGCGCGGGGAAGGATCCCCATTG
ATGGGAACATCGTTCTCAACTCGGGCGGAGACGTCAAGGTTACGAAAGTA
GCCGTGGAACCAGTGTGGTATCTCCCCGGTGTGGCTGATCGATTCGGCGT
GTCGGAGAAGGATCTGCGCCGGGCGTTGTTCGAACATACGGGGGGCAGTT
ATCCGGAGTTGATTACGAGACCTGACATGAAGGTATTCCTTCCGCCGATT
GGCGGACTGACGGTTTACATCTTTGGGCCTCCTGAACGGGTATCTGATCC
GGAGATGCGGCTGGCGCTGCGCATTCACGATGAGTGTAATGGGTCGGATG
TGTTTCAGTCGGATATTTGTACGTGTCGGCCGTATCTGACCTTTGGAATT
GAGGAGGCGATTAAGGAGGCGCAGGGAGGTGGGAGTGGAGTGGTGATTTA
TTTCCGCAAGGAAGGGCGGGCGCTGGGTGAGGTGGTTAAGTATTTGGTGT
ATAATTCGAGGAAGAGGGGTGGGGATACCGCCGATAAGTATTTTCAGAGG
ACGGAGAATATTGCTGGGACTAAGGATATGCGGTTTCAGGCGTTGATGCC
GGATATTCTGCATTGGTTGGGCATTACCAAAATTGATCGCATGCTGTCCA
TGTCGAACATGAAGCATGATGCGATTGTCGAGCAGGGGATACCGATCTAT
GAGCGGGTTCCTATTCCGGATGATATGATTCCGGAAGATTCGCGGGTAGA
GATCGACGCAAAGATTCACTCTGGGTACTTCTCGGCTGGAAAGGAGATAA
CAGAAGAAGACCTCAAGCAAGTTAAGGGACGGGGCTGGGAGTCTTGGGAG
GATGTAACGCATTAAATGCCAACAGCAACACAAGAACCCCCCTCCAAAAC
GGAGTCCTACAGCAACCGCATAGTCCTAACAACCTACCCCTCCCAAAGTG
TCGCCAACCCCATCCCCCTAACCTGGGGTTCCTCCACCCCCGAAACCCGC
GGTCCCGTCATCGTCTCCCGCAGCAAAAACACCCTCAGCAAGCGCAACGC
GATCGGTGCCCACGGCGGCAGCTACTCATTCTACACCGCGCTCGCCATCG
CCTCAGGGGACCTCGAGCCCGACTTCCGCCCGAACTTCCTCAACACGCAG
CCGACATTTAACTTCCCTTACCAGGATGCATGGGGAGACAAGAGCAAGAT
CGTCTCAATGGACCCATTCGGACACGATATCGTCAAACACTACGGGAAGT
ATCTAGAAGAGGGCATAGACGTACGGCCAACCATCGCTGTGACGCGAGCG
ACGATGCGTGTCTCTGAGATCACGGATGCGATTGCGCGGGGAAGGATCCC
CATTGATGGGAACATCGTTCTCAACTCGGGCGGAGACGTCAAGGTTACGA
AAGTAGCCGTGGAACCAGTGTGGTATCTCCCCGGTGTGGCTGATCGATTC
GGCGTGTCGGAGAAGGATCTGCGCCGGGCGTTGTTCGAACATACGGGGGG
CAGTTATCCGGAGTTGATTACGAGACCTGACATGAAGGTATTCCTTCCGC
CGATTGGCGGACTGACGGTTTACATCTTTGGGCCTCCTGAACGGGTATCT
GATCCGGAGATGCGGCTGGCGCTGCGCATTCACGATGAGTGTAATGGGTC
GGATGTGTTTCAGTCGGATATTTGTACGTGTCGGCCGTATCTGACCTTTG
GAATTGAGGAGGCGATTAAGGAGGCGCAGGGAGGTGGGAGTGGAGTGGTG
ATTTATTTCCGCAAGGAAGGGCGGGCGCTGGGTGAGGTGGTTAAGTATTT
GGTGTATAATTCGAGGAAGAGGGGTGGGGATACCGCCGATAAGTATTTTC
AGAGGACGGAGAATATTGCTGGGACTAAGGATATGCGGTTTCAGGCGTTG
ATGCCGGATATTCTGCATTGGTTGGGCATTACCAAAATTGATCGCATGCT
GTCCATGTCGAACATGAAGCATGATGCGATTGTCGAGCAGGGGATACCGA
TCTATGAGCGGGTTCCTATTCCGGATGATATGATTCCGGAAGATTCGCGG
GTAGAGATCGACGCAAAGATTCACTCTGGGTACTTCTCGGCTGGAAAGGA
GATAACAGAAGAAGACCTCAAGCAAGTTAAGGGACGGGGCTGGGAGTCTT
GGGAGGATGTAACGCATTAAATGCCAACAGCAACACAAGAACCCCCCTCC
AAAACGGAGTCCTACAGCAACCGCATAGTCCTAACAACCTACCCCTCCCA
AAGTGTCGCCAACCCCATCCCCCTAACCTGGGGTTCCTCCACCCCCGAAA
CCCGCGGTCCCGTCATCGTCTCCCGCAGCAAAAACACCCTCAGCAAGCGC
AACGCGATCGGTGCCCACGGCGGCAGCTACTCATTCTACACCGCGCTCGC
CATCGCCTCAGGGGACCTCGAGCCCGACTTCCGCCCGAACTTCCTCAACA
CGCAGCCGACATTTAACTTCCCTTACCAGGATGCATGGGGAGACAAGAGC
AAGATCGTCTCAATGGACCCATTCGGACACGATATCGTCAAACACTACGG
GAAGTATCTAGAAGAGGGCATAGACGTACGGCCAACCATCGCTGTGACGC
GAGCGACGATGCGTGTCTCTGAGATCACGGATGCGATTGCGCGGGGAAGG
ATCCCCATTGATGGGAACATCGTTCTCAACTCGGGCGGAGACGTCAAGGT
TACGAAAGTAGCCGTGGAACCAGTGTGGTATCTCCCCGGTGTGGCTGATC
GATTCGGCGTGTCGGAGAAGGATCTGCGCCGGGCGTTGTTCGAACATACG
GGGGGCAGTTATCCGGAGTTGATTACGAGACCTGACATGAAGGTATTCCT
TCCGCCGATTGGCGGACTGACGGTTTACATCTTTGGGCCTCCTGAACGGG
TATCTGATCCGGAGATGCGGCTGGCGCTGCGCATTCACGATGAGTGTAAT
GGGTCGGATGTGTTTCAGTCGGATATTTGTACGTGTCGGCCGTATCTGAC
CTTTGGAATTGAGGAGGCGATTAAGGAGGCGCAGGGAGGTGGGAGTGGAG
TGGTGATTTATTTCCGCAAGGAAGGGCGGGCGCTGGGTGAGGTGGTTAAG
TATTTGGTGTATAATTCGAGGAAGAGGGGTGGGGATACCGCCGATAAGTA
TTTTCAGAGGACGGAGAATATTGCTGGGACTAAGGATATGCGGTTTCAGG
CGTTGATGCCGGATATTCTGCATTGGTTGGGCATTACCAAAATTGATCGC
ATGCTGTCCATGTCGAACATGAAGCATGATGCGATTGTCGAGCAGGGGAT
ACCGATCTATGAGCGGGTTCCTATTCCGGATGATATGATTCCGGAAGATT
CGCGGGTAGAGATCGACGCAAAGATTCACTCTGGGTACTTCTCGGCTGGA
AAGGAGATAACAGAAGAAGACCTCAAGCAAGTTAAGGGACGGGGCTGGGA
GTCTTGGGAGGATGTAACGCATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009231 | riboflavin biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003935 | GTP cyclohydrolase II activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003180-T1.utr5p1 | KJC3_003180-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003180-T1.utr3p1 | KJC3_003180-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000926 |
| DBxref | InterPro:IPR032677 |
| DBxref | InterPro:IPR036144 |
| DBxref | InterPro:IPR022163 |
| DBxref | PFAM:PF00925 |
| DBxref | PFAM:PF12471 |
| Product | Uracil-regulated protein 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1163481..1165275 + |
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