|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1198685..1200799+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003193-T1 ID=KJC3_003193-T1|Name=KJC3_003193-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2115bp|location=Sequence derived from alignment at ch3:1198685..1200799+ (Aspergillus niger KJC3)
ATGGCCTGTCTTACTGACCTGCCAAACGAGCTCCTGCTGGACATAGTAAG
CTACATCGAATACAACCTCGATCTGGCAGCACTGTCCCAGACCAACCGTC
GAATCTACCATCTTACGAGTTCGCTCGTGGACCAAAAAATCAATCATATG
TTTAAAAATAGCCGCCTATATGTCAACGAAAGCCGTGCAATGCAACGAGC
AGCTGCAAATGGAAACGTGGACTGTGTCCGCAGGTTGTTTCGAGCCGGGA
TCCCCGCGCGCCCCGACATACACTATGACCGCTGGAAGCCCAGTGATCCG
GCTACTGTTGCGGCCATGTACGGACATGCAAATGTTGTTCGGCTGTTCTT
GGATGCTGGAGTCGATCCAAATGTTATAACATCCCATCAAAGTTTATGTG
CCCGTGGTAATCTTTTAACCATCGCCATCCAGCAAGGCCATGAATCGGTT
GTTCGACTACTGCTGGAACATGGGGTAAAGCTGGTCTTTACCAAGGAAGA
CGGGGATATAAACCAGCCCCTATCCGTTGCAACGGAGTTCGGTCACTACG
AGCTGGTGAAGCTGCTTCTAGAACATGGGTGCAATCCCCTGACACCCGAT
TACCGACAGGATGGTAAAGATGAAACATCGGCTTTCTTCAGAGCTGGCGC
TCGGAGTCTGCCTATTCTGCAGCTGTTCCTGGAGCCCAATATACCAAAGG
ACTACTTCTCTGATCCTAAGTACAACTCTCAAGAGTTGGTATTGAAGGTT
CTTGAGTGGGGAGATATACCGCTGGCCAGGTTCCTTTTGGATCACGGCGC
CGAGCTTGCCATACCAAATTACGACTCATCGGAACCTACTCGCGTCGTTC
CACTTGATGACGTTCTGTATCGCGTCGGCTGTGCGTCTGGCCAGTATTCT
GAAAAAGCTGATTTTCTCCTCCAAAAATTCAATGTAGATAACATCATCAA
AGACGGGAACTTTTCCGCTGTTGTTTGTCTTGCTGCTGGTGCGGCTCTCG
GAGGCAATGTGGGACTGCTTGACCGTGTGTTAGAGGTTGATTGGGTACAC
ACACGCAAAGTCATTCAGCCACAGGACTGGAAAGATCGCTTAACCTTGTA
CCTAGTCGATGCAGTCCGCTGGGGTCATCTTGAAGTTGCCAGACTGTTGC
TTGATCACGGTGCAGATCCCAACGGCCCGGCCCCAGACGGCGAAGACTCA
ACATTTACCAGGCCTGTATACACTGCAGTGGAGAAGGGACACACAAAGCT
TGTCGTACTACTGCTTGATCGGGGAGCCGACCCCAACCCAGAAGACCGTG
GTGGTCTGTTCTTGTTTGCCACTAGTTGTTGCTTACATCAGGTAGTGCGG
CAGACACGTTTGGATATTGTCCAGCTTCTGATTGACAGAAAGATCCATGT
GCCGGAGGTGTCAAGTGGCTTAGACCCAATGACATCTCTGGTCTGTTCGG
GAGCTAAAGTATTCCAGCTGGCTGTACAGCATATGAACCTCAAACTTAAA
GTAGGTGACATCTGGCATATGCAGGCCTTTCAGGTCGCAGTGAAGACTGG
AGACATTCCAATTATCACAGAATTTCTCGAGGCAGGGTTTAAGCCAAATA
ATTGGTCCTGGCTTCTGCCCAACGCGGCAGATCATTTTGACCCAGATGTT
GCCGAGCAGGCCGTTGATCTGTTGCTCAAGTACGGTGCAGATATTGACGT
ACAGAGTCATGAAACGAGCAGGCCAAATCTTTACAGCTTTAATTCGTCCT
GTCTAGCAGTACGCAAAGACAGAGTCATTAAGCTGCTCTTGAAGAAAGGC
GCCAATCCTTTCAGGGTTGACTGGTCCGGAAAACACGTTTTCATAGCGGC
AGCAGCGGCAGGCGAGATTCATTCTGTGAAAGGCGTATTGGAGTACATTG
AGGAGACAGGTATCCCATTCGGTGAGGTGAGATCCATGGTTGAGGAAGCC
GCGCGATGTGCAACCAGTGCTGCGGAGTTTGCGGTACCTTTAGCTCAAAA
AGGCCTACTATCGACTAGCAGAGCATTTGAAGGTCCCTTCGAGAAAGCTA
GGAATATTACTAGAGTGGAGGAGTACTTATGGCGTTGGTACTGGCGCAGA
GTCTATCCTTGTTAG back to topCoding sequence (CDS) from alignment at ch3:1198685..1200799+ >KJC3_003193-T1 ID=KJC3_003193-T1|Name=KJC3_003193-T1|organism=Aspergillus niger KJC3|type=CDS|length=2115bp|location=Sequence derived from alignment at ch3:1198685..1200799+ (Aspergillus niger KJC3)
ATGGCCTGTCTTACTGACCTGCCAAACGAGCTCCTGCTGGACATAGTAAG
CTACATCGAATACAACCTCGATCTGGCAGCACTGTCCCAGACCAACCGTC
GAATCTACCATCTTACGAGTTCGCTCGTGGACCAAAAAATCAATCATATG
TTTAAAAATAGCCGCCTATATGTCAACGAAAGCCGTGCAATGCAACGAGC
AGCTGCAAATGGAAACGTGGACTGTGTCCGCAGGTTGTTTCGAGCCGGGA
TCCCCGCGCGCCCCGACATACACTATGACCGCTGGAAGCCCAGTGATCCG
GCTACTGTTGCGGCCATGTACGGACATGCAAATGTTGTTCGGCTGTTCTT
GGATGCTGGAGTCGATCCAAATGTTATAACATCCCATCAAAGTTTATGTG
CCCGTGGTAATCTTTTAACCATCGCCATCCAGCAAGGCCATGAATCGGTT
GTTCGACTACTGCTGGAACATGGGGTAAAGCTGGTCTTTACCAAGGAAGA
CGGGGATATAAACCAGCCCCTATCCGTTGCAACGGAGTTCGGTCACTACG
AGCTGGTGAAGCTGCTTCTAGAACATGGGTGCAATCCCCTGACACCCGAT
TACCGACAGGATGGTAAAGATGAAACATCGGCTTTCTTCAGAGCTGGCGC
TCGGAGTCTGCCTATTCTGCAGCTGTTCCTGGAGCCCAATATACCAAAGG
ACTACTTCTCTGATCCTAAGTACAACTCTCAAGAGTTGGTATTGAAGGTT
CTTGAGTGGGGAGATATACCGCTGGCCAGGTTCCTTTTGGATCACGGCGC
CGAGCTTGCCATACCAAATTACGACTCATCGGAACCTACTCGCGTCGTTC
CACTTGATGACGTTCTGTATCGCGTCGGCTGTGCGTCTGGCCAGTATTCT
GAAAAAGCTGATTTTCTCCTCCAAAAATTCAATGTAGATAACATCATCAA
AGACGGGAACTTTTCCGCTGTTGTTTGTCTTGCTGCTGGTGCGGCTCTCG
GAGGCAATGTGGGACTGCTTGACCGTGTGTTAGAGGTTGATTGGGTACAC
ACACGCAAAGTCATTCAGCCACAGGACTGGAAAGATCGCTTAACCTTGTA
CCTAGTCGATGCAGTCCGCTGGGGTCATCTTGAAGTTGCCAGACTGTTGC
TTGATCACGGTGCAGATCCCAACGGCCCGGCCCCAGACGGCGAAGACTCA
ACATTTACCAGGCCTGTATACACTGCAGTGGAGAAGGGACACACAAAGCT
TGTCGTACTACTGCTTGATCGGGGAGCCGACCCCAACCCAGAAGACCGTG
GTGGTCTGTTCTTGTTTGCCACTAGTTGTTGCTTACATCAGGTAGTGCGG
CAGACACGTTTGGATATTGTCCAGCTTCTGATTGACAGAAAGATCCATGT
GCCGGAGGTGTCAAGTGGCTTAGACCCAATGACATCTCTGGTCTGTTCGG
GAGCTAAAGTATTCCAGCTGGCTGTACAGCATATGAACCTCAAACTTAAA
GTAGGTGACATCTGGCATATGCAGGCCTTTCAGGTCGCAGTGAAGACTGG
AGACATTCCAATTATCACAGAATTTCTCGAGGCAGGGTTTAAGCCAAATA
ATTGGTCCTGGCTTCTGCCCAACGCGGCAGATCATTTTGACCCAGATGTT
GCCGAGCAGGCCGTTGATCTGTTGCTCAAGTACGGTGCAGATATTGACGT
ACAGAGTCATGAAACGAGCAGGCCAAATCTTTACAGCTTTAATTCGTCCT
GTCTAGCAGTACGCAAAGACAGAGTCATTAAGCTGCTCTTGAAGAAAGGC
GCCAATCCTTTCAGGGTTGACTGGTCCGGAAAACACGTTTTCATAGCGGC
AGCAGCGGCAGGCGAGATTCATTCTGTGAAAGGCGTATTGGAGTACATTG
AGGAGACAGGTATCCCATTCGGTGAGGTGAGATCCATGGTTGAGGAAGCC
GCGCGATGTGCAACCAGTGCTGCGGAGTTTGCGGTACCTTTAGCTCAAAA
AGGCCTACTATCGACTAGCAGAGCATTTGAAGGTCCCTTCGAGAAAGCTA
GGAATATTACTAGAGTGGAGGAGTACTTATGGCGTTGGTACTGGCGCAGA
GTCTATCCTTGTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR001810 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF12796 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1198685..1200799 + |
|
