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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1211537..1212460+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003199-T1 ID=KJC3_003199-T1|Name=KJC3_003199-T1|organism=Aspergillus niger KJC3|type=mRNA|length=924bp|location=Sequence derived from alignment at ch3:1211537..1212460+ (Aspergillus niger KJC3)
AAATTATCTCTCCGAGTAAGCCTCCGAACCTGTTGACGTTCGGAGGTAGC
CACTGATCTACCCCGCAGCTAAACATGGTGGCTCCCAGGCGACAAGCAGT
CACTCTAATTATTATTACCATCCTTGTTCTCTTCAACAACAATCTTTTGG
AAACATCCTTCTGGTCTTTTACCAGTTCTCTCACATCAATCATTGCCCAA
CATGTCGATCACGCACATTGTCATGTTCCAATTCAAAGACGGGGTCAGCC
CCGAAGTAATCAAAGATGTAAGTTACACCAGCCCACCTAGCGCTTATCCA
CATCTAACATAAGGACGTGTCAAAAAGGTGTGCTCTCGGATGCTAGCTCT
AAAAGATAATTGTATACACCCCACCTCTCAGAAGCCATACATTCAGGCCG
CATCGGGCGGACTGGATAATTCGCCCGAAGGCATCCAAGTAAGTGACGAA
CCACTGTCCTATCTTTCTAGTGCATGCCTGACACAGAAGCAAACTGAAGC
ATGGAATCACCCATGCTTTTGTCGTACATTTCGCGAGCGCTGAAGATCGC
GATTATTATGTGGCCAAGGATCCAGCCCATCAGGCATTTGTCAAGAGTCT
GGACGGTATCATTGAGAAGGTGCAAGCGATTGACTTTACTGATCGCGTTT
ATTGATCTGTTGGGCCGAATGAGCATTATAGACGAATACTAAATGACAAT
GGATCATCCAGAACGGGAATGTTTTCGCATCCCTTCGTTTCTTGGAGACA
ATACGTACAGTGTCTTTATTAGGTGAAGTATAACTTTGCTGCTGCAAAGT
GATGGCATAGCCAATATTCGACGCTTATGTCTCAAGATAGAATGTGGCTG
AGAGACGATCACTCATTATGTAATATGGCATGTTGATAAAGCGTTATCAG
CCAAGGTTCAAAGCGAAGAGCCCC back to topCoding sequence (CDS) from alignment at ch3:1211537..1212460+ >KJC3_003199-T1 ID=KJC3_003199-T1|Name=KJC3_003199-T1|organism=Aspergillus niger KJC3|type=CDS|length=999bp|location=Sequence derived from alignment at ch3:1211537..1212460+ (Aspergillus niger KJC3)
ATGTCGATCACGCACATTGTCATGTTCCAATTCAAAGACGGGGTCAGCCC
CGAAGTAATCAAAGATGTGTGCTCTCGGATGCTAGCTCTAAAAGATAATT
GTATACACCCCACCTCTCAGAAGCCATACATTCAGGCCGCATCGGGCGGA
CTGGATAATTCGCCCGAAGGCATCCAACATGGAATCACCCATGCTTTTGT
CGTACATTTCGCGAGCGCTGAAGATCGCGATTATTATGTGGCCAAGGATC
CAGCCCATCAGGCATTTGTCAAGAGTCTGGACGGTATCATTGAGAAGGTG
CAAGCGATTGACTTTACTGATCGCGTTTATTGAATGTCGATCACGCACAT
TGTCATGTTCCAATTCAAAGACGGGGTCAGCCCCGAAGTAATCAAAGATG
TGTGCTCTCGGATGCTAGCTCTAAAAGATAATTGTATACACCCCACCTCT
CAGAAGCCATACATTCAGGCCGCATCGGGCGGACTGGATAATTCGCCCGA
AGGCATCCAACATGGAATCACCCATGCTTTTGTCGTACATTTCGCGAGCG
CTGAAGATCGCGATTATTATGTGGCCAAGGATCCAGCCCATCAGGCATTT
GTCAAGAGTCTGGACGGTATCATTGAGAAGGTGCAAGCGATTGACTTTAC
TGATCGCGTTTATTGAATGTCGATCACGCACATTGTCATGTTCCAATTCA
AAGACGGGGTCAGCCCCGAAGTAATCAAAGATGTGTGCTCTCGGATGCTA
GCTCTAAAAGATAATTGTATACACCCCACCTCTCAGAAGCCATACATTCA
GGCCGCATCGGGCGGACTGGATAATTCGCCCGAAGGCATCCAACATGGAA
TCACCCATGCTTTTGTCGTACATTTCGCGAGCGCTGAAGATCGCGATTAT
TATGTGGCCAAGGATCCAGCCCATCAGGCATTTGTCAAGAGTCTGGACGG
TATCATTGAGAAGGTGCAAGCGATTGACTTTACTGATCGCGTTTATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003199-T1.utr5p1 | KJC3_003199-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003199-T1.utr3p1 | KJC3_003199-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011008 |
| DBxref | InterPro:IPR013097 |
| DBxref | PFAM:PF07876 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1211537..1212460 + |
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