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KJC3_003202-T1, KJC3_003202-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003202-T1
Unique NameKJC3_003202-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1225851..1227125-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003202-T1 ID=KJC3_003202-T1|Name=KJC3_003202-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1275bp|location=Sequence derived from alignment at ch3:1225851..1227125- (Aspergillus niger KJC3)
ATGGCCATCTACCTCGGCTGCGTGCTCTTCGTCGTTGGCTCTGTTCTCCA
GGCTGCCGCCTATACGATCGCGCAGATGGCGGTGGGTCGCGTAGTGGTCG
GGCTGGGCGTAGGCTCGGCGGCGATGGTGGTGCCGCTGTACGTTGCGGAG
ATCGCACCCGCGGGCGCCCGCGGTCGCCTAATTGGGCTAAACAACATGTC
CATCACCGGAGGACAGGTCATCTCTTATGCAATCGGAGCGGCCTTTGCGA
ATGTCAGCCACGGTTGGCGCTACATGGTCGGCCTGGGCGCTCTCCCCGCC
ATTATCCTCGGCTGTATGATGCCGTTTTGTCCCGAATCGCCTCGCCATCT
CATCTACAACGGGCGCGACGAAGAAGCCCGCGGCGTCCTGTGTCGCATCT
ACAGCAGCGCTGCGACGGACGAGCAGATTGCCGCGCTGTTGGTCACGATC
CGTGCGGCCTGCGATCAGGCGCGCGAGATCAACGACACGGGTAGCCGATG
GTCCAAGATCGTGAAATTACATACCGTGGGGAGTAATTTGCGCGCGTTGA
TTAGTGCGTGCGGGTTAATGGTCATCTCGCAAATGAGTGGGTTCAATGCC
CTTATGTACTACTCTTCGACCCTGTTTGCGTTGGTGGGGTTCAACAACTC
GACAGCCGTGGGGTTAGTGGTCGCGGGCACCAACTTTATCATGACTTGGG
TGAACATGATGGTGGTGGATGGCTGGGGTCGCCGACGCTTGCTCCTGGCG
ACCGCCTGGGGAATGGCGGTGGGGATGGCCGCCGTTGCGATCGCTTTCCA
CTGGGTTCCCGTCGATATGGAAACGCTAGAACCCCTCAACCCGGGAGTCT
CTCCGGCGGCTATCGTCATTCTGGTGTTTATCATCTGGTTCGTGGTGTTC
TATGGGGTGTCGGTCGGCAACACCGCCTGGATGAGCACCGACTTCTTCCC
GCTGGAGGTGCGCGCCATGGGCACCATGTGGATGACCTGCTCGAACTGGG
GCAGCAACGTTATTGTCTCCAGCACCTTCCTTACCATGGCCAAATCAATG
ACTCCCTCTGGAGCATTCGGCTTCTACGCGGCGCTGTGTGGCGTTTCCTA
CGTCTGGATTTATTTCTTCTATCCCGAGGTGTCCGGCCTCGTGCTGGAAG
AAGTCCAGGAAGTGTTCCAGCACGGGTTCGGGGTCCGGTACGCCCGACAG
CTGCGCAAGGAGCGAAAAGACATCATCGAGGAGCGGATGCGAAGTGCGGA
CAAGCCGATTCCAATGGGCCATTAG
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Coding sequence (CDS) from alignment at ch3:1225851..1227125-

>KJC3_003202-T1 ID=KJC3_003202-T1|Name=KJC3_003202-T1|organism=Aspergillus niger KJC3|type=CDS|length=1275bp|location=Sequence derived from alignment at ch3:1225851..1227125- (Aspergillus niger KJC3)
ATGGCCATCTACCTCGGCTGCGTGCTCTTCGTCGTTGGCTCTGTTCTCCA
GGCTGCCGCCTATACGATCGCGCAGATGGCGGTGGGTCGCGTAGTGGTCG
GGCTGGGCGTAGGCTCGGCGGCGATGGTGGTGCCGCTGTACGTTGCGGAG
ATCGCACCCGCGGGCGCCCGCGGTCGCCTAATTGGGCTAAACAACATGTC
CATCACCGGAGGACAGGTCATCTCTTATGCAATCGGAGCGGCCTTTGCGA
ATGTCAGCCACGGTTGGCGCTACATGGTCGGCCTGGGCGCTCTCCCCGCC
ATTATCCTCGGCTGTATGATGCCGTTTTGTCCCGAATCGCCTCGCCATCT
CATCTACAACGGGCGCGACGAAGAAGCCCGCGGCGTCCTGTGTCGCATCT
ACAGCAGCGCTGCGACGGACGAGCAGATTGCCGCGCTGTTGGTCACGATC
CGTGCGGCCTGCGATCAGGCGCGCGAGATCAACGACACGGGTAGCCGATG
GTCCAAGATCGTGAAATTACATACCGTGGGGAGTAATTTGCGCGCGTTGA
TTAGTGCGTGCGGGTTAATGGTCATCTCGCAAATGAGTGGGTTCAATGCC
CTTATGTACTACTCTTCGACCCTGTTTGCGTTGGTGGGGTTCAACAACTC
GACAGCCGTGGGGTTAGTGGTCGCGGGCACCAACTTTATCATGACTTGGG
TGAACATGATGGTGGTGGATGGCTGGGGTCGCCGACGCTTGCTCCTGGCG
ACCGCCTGGGGAATGGCGGTGGGGATGGCCGCCGTTGCGATCGCTTTCCA
CTGGGTTCCCGTCGATATGGAAACGCTAGAACCCCTCAACCCGGGAGTCT
CTCCGGCGGCTATCGTCATTCTGGTGTTTATCATCTGGTTCGTGGTGTTC
TATGGGGTGTCGGTCGGCAACACCGCCTGGATGAGCACCGACTTCTTCCC
GCTGGAGGTGCGCGCCATGGGCACCATGTGGATGACCTGCTCGAACTGGG
GCAGCAACGTTATTGTCTCCAGCACCTTCCTTACCATGGCCAAATCAATG
ACTCCCTCTGGAGCATTCGGCTTCTACGCGGCGCTGTGTGGCGTTTCCTA
CGTCTGGATTTATTTCTTCTATCCCGAGGTGTCCGGCCTCGTGCTGGAAG
AAGTCCAGGAAGTGTTCCAGCACGGGTTCGGGGTCCGGTACGCCCGACAG
CTGCGCAAGGAGCGAAAAGACATCATCGAGGAGCGGATGCGAAGTGCGGA
CAAGCCGATTCCAATGGGCCATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003202KJC3_003202Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003202-T1.cdsKJC3_003202-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003202-T1.exon1KJC3_003202-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003202-T1KJC3_003202-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1225851..1227125 -
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