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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1232884..1234049+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003206-T1 ID=KJC3_003206-T1|Name=KJC3_003206-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1166bp|location=Sequence derived from alignment at ch3:1232884..1234049+ (Aspergillus niger KJC3)
TTAATCCTAACATAATACCATTAACAGAAGCTTCCTAGTCATTACCATTC
AACCTCCATTGAATTCAATGAAAACACAGACAACAATCCCGAAAATGCGT
CCCCGCCTAACCCTCCCTCCCCTCCCCCTTCGACTTCACCACCACCACCA
CACCCTCCGCACCTACACAACACAACCCCCCAAACCCCCCTCCCATCCCA
GCACACCACCGCAACCCAACCTCCGCCACAACCGCCTCATCCTCGCCCTC
ACCGGCGCAACCGGCTCCATCTACGGCATCCGCACCCTCACTACCCTGCA
CCAACTCAACATCCAAACCCACCTAATCCTCTCCAAATGGGCTCTCCCGA
CCCTCCGCTACGAAGCTCCCCAATACACCGTCCCCTACCTTACCTCCCTC
GCAACCCACACTCACTCACCCCGCGACCTCGCCGCCCCCATAAGCAGCGG
CAGCTACCCGGTGGACGGAATGATCATCGCGCCCTGCAGCATGAAGACCC
TGGCGGCAATCCGCATGGGGTACGGCGAGGACTTGATCTCGCGGGCTGCG
GACGTGTGCATTAAAGAGGGAAGGAAATTGGTTCTGATGGTGAGGGAGAC
GCCGTTGAGTGTGATTCATCTAGAGAATATGGCGGCGTTGGCGAGGTTGG
GGGTTTTTATCTTTCCTCCAGTCCCGGGGTTTTATACGAGGCCGAAGGGG
ATTGATGAGGTCGTGGGACATAGTGTGGCGAGGATGTTGGATGTGATGGG
GGTGAATGTGGGTGATATTGGGGTGGATGGGAGGGAGGGGGATGGGGATA
AAGAGGGGGGTAGTGGTGGAGGGGGGGTTATGCCGGCGGAGGGAAGGTGG
GTTGGGTGGAGGAAGTGAGGACTGAAGGGGATGGGCGGGGTATGTGGTTA
CGGGGATTATATTTAGCTTGAGGTGTGTGGCTAAGCAGAGGGTAACTCTT
GTAGTGCTAATGATATGTGTGATGAGGAGTACATGGGTGATATAGATTCC
TATGTTTCTCATTTTTGTACTATACTATGGCGTATCAGCACCTGTTGCTC
GGGGTTTCATATAGACAAATAGACAATATTCCAACTGGTTGGCTGATGCA
CAATATCGTTTCCTGCTCCTGTCCTGCTACCAAACCTGTATCCCTTCGCG
GGACGTCAATGTTGAG back to topCoding sequence (CDS) from alignment at ch3:1232884..1234049+ >KJC3_003206-T1 ID=KJC3_003206-T1|Name=KJC3_003206-T1|organism=Aspergillus niger KJC3|type=CDS|length=801bp|location=Sequence derived from alignment at ch3:1232884..1234049+ (Aspergillus niger KJC3)
ATGAAAACACAGACAACAATCCCGAAAATGCGTCCCCGCCTAACCCTCCC
TCCCCTCCCCCTTCGACTTCACCACCACCACCACACCCTCCGCACCTACA
CAACACAACCCCCCAAACCCCCCTCCCATCCCAGCACACCACCGCAACCC
AACCTCCGCCACAACCGCCTCATCCTCGCCCTCACCGGCGCAACCGGCTC
CATCTACGGCATCCGCACCCTCACTACCCTGCACCAACTCAACATCCAAA
CCCACCTAATCCTCTCCAAATGGGCTCTCCCGACCCTCCGCTACGAAGCT
CCCCAATACACCGTCCCCTACCTTACCTCCCTCGCAACCCACACTCACTC
ACCCCGCGACCTCGCCGCCCCCATAAGCAGCGGCAGCTACCCGGTGGACG
GAATGATCATCGCGCCCTGCAGCATGAAGACCCTGGCGGCAATCCGCATG
GGGTACGGCGAGGACTTGATCTCGCGGGCTGCGGACGTGTGCATTAAAGA
GGGAAGGAAATTGGTTCTGATGGTGAGGGAGACGCCGTTGAGTGTGATTC
ATCTAGAGAATATGGCGGCGTTGGCGAGGTTGGGGGTTTTTATCTTTCCT
CCAGTCCCGGGGTTTTATACGAGGCCGAAGGGGATTGATGAGGTCGTGGG
ACATAGTGTGGCGAGGATGTTGGATGTGATGGGGGTGAATGTGGGTGATA
TTGGGGTGGATGGGAGGGAGGGGGATGGGGATAAAGAGGGGGGTAGTGGT
GGAGGGGGGGTTATGCCGGCGGAGGGAAGGTGGGTTGGGTGGAGGAAGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003206-T1.utr5p1 | KJC3_003206-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003206-T1.utr3p1 | KJC3_003206-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004507 |
| DBxref | InterPro:IPR036551 |
| DBxref | InterPro:IPR003382 |
| DBxref | PFAM:PF02441 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1232884..1234049 + |
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