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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1245418..1247138- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003211-T1 ID=KJC3_003211-T1|Name=KJC3_003211-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1721bp|location=Sequence derived from alignment at ch3:1245418..1247138- (Aspergillus niger KJC3)
GAAAAAAATAAAAAATAGGGAGCACGGAACCACTCGCTTGGGTCGGATGT
TATGCCGGGTGATGATTATGAACCGTGCGTGCCGACTGTCAACTTCAATG
CCAAAATTTAGAACAGGCCGACACTGCAGGCAGTCAGTCAGTCGCTGGGT
TGTTGATGATTGGGGATATATTAATACATAGTATACCCTCTTAGACTCTT
TCCTCCTGTTTGTCTTGTCTTTTTGTGAATTGATCCACAGGTCCACTCAT
TCCCACACTCTCTTTCACACTCTCTGTCATCTGTCAGTCATGGCAGGCGA
TGACTTCGCTGTCGAGGCATTCACCCTCCTAGCCATTGCCATCGTCACCA
TCGCCATTCGCATCGTTGCACGATGGTTCACCGCCGGCTGGAAGAACTTT
ATGCTCGATGATTATTTGATGCCGTTGGCGGGGGTATGTGCCTCTCTCCC
CGCCACCATTTTCCCACGCTTCTTAATGGAATAAGCGTGCTGATAAGCCA
TGATGTGACAGGTAGTATACGGTCTCGAAACAGGCGCCGCCTACTGCGTC
AGCGCTTGGTGGAAAGGTCTCGCCAACAATGCCATGACAGACGCTGAGCG
CGCCGCGCTCTCGCCGTCTTCAGAGGAGTACCATTTGCGGGTTGGGGGGT
CCAAGACCCAGGTATTAGGGTGGTCGCTGTATACCACGTTGTTGTGGCTG
CTCAAGTCGTGCATGGCTGTGTTTTACTCTCGATTGACGTATGCGCCCCG
TCAGCACTTCCCCCTCCCGCCCAACAACAATATACTAATAGTGTATGGTA
ATAGGGCCGGCCTCATCAACATGCACATCCGCATCCGCATCGCCTACGTT
CTCATCGCAGTCACCTACATCGCTGTTATCCTCAGCATCCTGGTCGGATG
CCACCCCATCCAAAAGAACTGGCAGATCAACCCCAATCCGGGGAATTATT
GTCAGCCGGCTGTCTCGCATATTGATGTTTACGTGACGGTGGTGTTGAAT
GTTGCTACGGATGTGTATTTGATTTCCATTCCGACCCCTGTATGTCATTC
CCTCACTCTTGACAAATATATATATATACAGCCAAGACTGATTTGTTTTT
CTACACAGATTCTCTTCAAAGCCCGTCTCCCCTGGCGCGAGAAACTTGAG
CTCCTTATCCTCTTCAGCGGCGGTACCTTTGTCATGGCATGTGGCATTCT
GCGTTGTGTGTTGATCGTTACTGTATGTCCCCTATCCCTAACCAACACCC
CCTTAATCCAACACCACCACCCACTAACACCCTGATAAACAGGCCGGCGC
CAACGGTGCCTCCCAAGCCGGCAGCTGGGCCTGTCGCGAAACCTTCGTAG
CGGTAATAATCGGCAACGCGCCCATGATCTACCCGATGTGCCGGCGGCTG
GCGATGCGAGCAGGCTGGTACATGTCCACCAAAGGCACCAAGGGCAGCTC
ACAGAGCTATCCGTTATCAGAGGGAGCAGCACACTCAGGCACCGACAATA
GCAAGAACAAGAGACGGAAGTTCAAGCATCCGTTGTCGTTGCCGGATACG
CAGTGGAATACGATTAGTGATGAGCAGATGATGCTTCCGCCGGGCGAGTG
GGAGGTTAGTCATGCGGCGAGGAGTAACGGGGATGGGAATGGGACGGATG
GGAATAGTAGTAATGGGGTGTATGATGGGGGGTGGAAGGGGGGGAGGGAG
ACGGTTGTTTCAACCACTTGA back to topCoding sequence (CDS) from alignment at ch3:1245418..1247138- >KJC3_003211-T1 ID=KJC3_003211-T1|Name=KJC3_003211-T1|organism=Aspergillus niger KJC3|type=CDS|length=5745bp|location=Sequence derived from alignment at ch3:1245418..1247138- (Aspergillus niger KJC3)
GCCGGCGCCAACGGTGCCTCCCAAGCCGGCAGCTGGGCCTGTCGCGAAAC
CTTCGTAGCGGTAATAATCGGCAACGCGCCCATGATCTACCCGATGTGCC
GGCGGCTGGCGATGCGAGCAGGCTGGTACATGTCCACCAAAGGCACCAAG
GGCAGCTCACAGAGCTATCCGTTATCAGAGGGAGCAGCACACTCAGGCAC
CGACAATAGCAAGAACAAGAGACGGAAGTTCAAGCATCCGTTGTCGTTGC
CGGATACGCAGTGGAATACGATTAGTGATGAGCAGATGATGCTTCCGCCG
GGCGAGTGGGAGGTTAGTCATGCGGCGAGGAGTAACGGGGATGGGAATGG
GACGGATGGGAATAGTAGTAATGGGGTGTATGATGGGGGGTGGAAGGGGG
GGAGGGAGACGGTTGTTTCAACCACTTGAATTCTCTTCAAAGCCCGTCTC
CCCTGGCGCGAGAAACTTGAGCTCCTTATCCTCTTCAGCGGCGGTACCTT
TGTCATGGCATGTGGCATTCTGCGTTGTGTGTTGATCGTTACTGGCCGGC
CTCATCAACATGCACATCCGCATCCGCATCGCCTACGTTCTCATCGCAGT
CACCTACATCGCTGTTATCCTCAGCATCCTGGTCGGATGCCACCCCATCC
AAAAGAACTGGCAGATCAACCCCAATCCGGGGAATTATTGTCAGCCGGCT
GTCTCGCATATTGATGTTTACGTGACGGTGGTGTTGAATGTTGCTACGGA
TGTGTATTTGATTTCCATTCCGACCCCTGTAGTATACGGTCTCGAAACAG
GCGCCGCCTACTGCGTCAGCGCTTGGTGGAAAGGTCTCGCCAACAATGCC
ATGACAGACGCTGAGCGCGCCGCGCTCTCGCCGTCTTCAGAGGAGTACCA
TTTGCGGGTTGGGGGGTCCAAGACCCAGGTATTAGGGTGGTCGCTGTATA
CCACGTTGTTGTGGCTGCTCAAGTCGTGCATGGCTGTGTTTTACTCTCGA
TTGACATGGCAGGCGATGACTTCGCTGTCGAGGCATTCACCCTCCTAGCC
ATTGCCATCGTCACCATCGCCATTCGCATCGTTGCACGATGGTTCACCGC
CGGCTGGAAGAACTTTATGCTCGATGATTATTTGATGCCGTTGGCGGGGG
CCGGCGCCAACGGTGCCTCCCAAGCCGGCAGCTGGGCCTGTCGCGAAACC
TTCGTAGCGGTAATAATCGGCAACGCGCCCATGATCTACCCGATGTGCCG
GCGGCTGGCGATGCGAGCAGGCTGGTACATGTCCACCAAAGGCACCAAGG
GCAGCTCACAGAGCTATCCGTTATCAGAGGGAGCAGCACACTCAGGCACC
GACAATAGCAAGAACAAGAGACGGAAGTTCAAGCATCCGTTGTCGTTGCC
GGATACGCAGTGGAATACGATTAGTGATGAGCAGATGATGCTTCCGCCGG
GCGAGTGGGAGGTTAGTCATGCGGCGAGGAGTAACGGGGATGGGAATGGG
ACGGATGGGAATAGTAGTAATGGGGTGTATGATGGGGGGTGGAAGGGGGG
GAGGGAGACGGTTGTTTCAACCACTTGAATTCTCTTCAAAGCCCGTCTCC
CCTGGCGCGAGAAACTTGAGCTCCTTATCCTCTTCAGCGGCGGTACCTTT
GTCATGGCATGTGGCATTCTGCGTTGTGTGTTGATCGTTACTGGCCGGCC
TCATCAACATGCACATCCGCATCCGCATCGCCTACGTTCTCATCGCAGTC
ACCTACATCGCTGTTATCCTCAGCATCCTGGTCGGATGCCACCCCATCCA
AAAGAACTGGCAGATCAACCCCAATCCGGGGAATTATTGTCAGCCGGCTG
TCTCGCATATTGATGTTTACGTGACGGTGGTGTTGAATGTTGCTACGGAT
GTGTATTTGATTTCCATTCCGACCCCTGTAGTATACGGTCTCGAAACAGG
CGCCGCCTACTGCGTCAGCGCTTGGTGGAAAGGTCTCGCCAACAATGCCA
TGACAGACGCTGAGCGCGCCGCGCTCTCGCCGTCTTCAGAGGAGTACCAT
TTGCGGGTTGGGGGGTCCAAGACCCAGGTATTAGGGTGGTCGCTGTATAC
CACGTTGTTGTGGCTGCTCAAGTCGTGCATGGCTGTGTTTTACTCTCGAT
TGACATGGCAGGCGATGACTTCGCTGTCGAGGCATTCACCCTCCTAGCCA
TTGCCATCGTCACCATCGCCATTCGCATCGTTGCACGATGGTTCACCGCC
GGCTGGAAGAACTTTATGCTCGATGATTATTTGATGCCGTTGGCGGGGGC
CGGCGCCAACGGTGCCTCCCAAGCCGGCAGCTGGGCCTGTCGCGAAACCT
TCGTAGCGGTAATAATCGGCAACGCGCCCATGATCTACCCGATGTGCCGG
CGGCTGGCGATGCGAGCAGGCTGGTACATGTCCACCAAAGGCACCAAGGG
CAGCTCACAGAGCTATCCGTTATCAGAGGGAGCAGCACACTCAGGCACCG
ACAATAGCAAGAACAAGAGACGGAAGTTCAAGCATCCGTTGTCGTTGCCG
GATACGCAGTGGAATACGATTAGTGATGAGCAGATGATGCTTCCGCCGGG
CGAGTGGGAGGTTAGTCATGCGGCGAGGAGTAACGGGGATGGGAATGGGA
CGGATGGGAATAGTAGTAATGGGGTGTATGATGGGGGGTGGAAGGGGGGG
AGGGAGACGGTTGTTTCAACCACTTGAATTCTCTTCAAAGCCCGTCTCCC
CTGGCGCGAGAAACTTGAGCTCCTTATCCTCTTCAGCGGCGGTACCTTTG
TCATGGCATGTGGCATTCTGCGTTGTGTGTTGATCGTTACTGGCCGGCCT
CATCAACATGCACATCCGCATCCGCATCGCCTACGTTCTCATCGCAGTCA
CCTACATCGCTGTTATCCTCAGCATCCTGGTCGGATGCCACCCCATCCAA
AAGAACTGGCAGATCAACCCCAATCCGGGGAATTATTGTCAGCCGGCTGT
CTCGCATATTGATGTTTACGTGACGGTGGTGTTGAATGTTGCTACGGATG
TGTATTTGATTTCCATTCCGACCCCTGTAGTATACGGTCTCGAAACAGGC
GCCGCCTACTGCGTCAGCGCTTGGTGGAAAGGTCTCGCCAACAATGCCAT
GACAGACGCTGAGCGCGCCGCGCTCTCGCCGTCTTCAGAGGAGTACCATT
TGCGGGTTGGGGGGTCCAAGACCCAGGTATTAGGGTGGTCGCTGTATACC
ACGTTGTTGTGGCTGCTCAAGTCGTGCATGGCTGTGTTTTACTCTCGATT
GACATGGCAGGCGATGACTTCGCTGTCGAGGCATTCACCCTCCTAGCCAT
TGCCATCGTCACCATCGCCATTCGCATCGTTGCACGATGGTTCACCGCCG
GCTGGAAGAACTTTATGCTCGATGATTATTTGATGCCGTTGGCGGGGGCC
GGCGCCAACGGTGCCTCCCAAGCCGGCAGCTGGGCCTGTCGCGAAACCTT
CGTAGCGGTAATAATCGGCAACGCGCCCATGATCTACCCGATGTGCCGGC
GGCTGGCGATGCGAGCAGGCTGGTACATGTCCACCAAAGGCACCAAGGGC
AGCTCACAGAGCTATCCGTTATCAGAGGGAGCAGCACACTCAGGCACCGA
CAATAGCAAGAACAAGAGACGGAAGTTCAAGCATCCGTTGTCGTTGCCGG
ATACGCAGTGGAATACGATTAGTGATGAGCAGATGATGCTTCCGCCGGGC
GAGTGGGAGGTTAGTCATGCGGCGAGGAGTAACGGGGATGGGAATGGGAC
GGATGGGAATAGTAGTAATGGGGTGTATGATGGGGGGTGGAAGGGGGGGA
GGGAGACGGTTGTTTCAACCACTTGAATTCTCTTCAAAGCCCGTCTCCCC
TGGCGCGAGAAACTTGAGCTCCTTATCCTCTTCAGCGGCGGTACCTTTGT
CATGGCATGTGGCATTCTGCGTTGTGTGTTGATCGTTACTGGCCGGCCTC
ATCAACATGCACATCCGCATCCGCATCGCCTACGTTCTCATCGCAGTCAC
CTACATCGCTGTTATCCTCAGCATCCTGGTCGGATGCCACCCCATCCAAA
AGAACTGGCAGATCAACCCCAATCCGGGGAATTATTGTCAGCCGGCTGTC
TCGCATATTGATGTTTACGTGACGGTGGTGTTGAATGTTGCTACGGATGT
GTATTTGATTTCCATTCCGACCCCTGTAGTATACGGTCTCGAAACAGGCG
CCGCCTACTGCGTCAGCGCTTGGTGGAAAGGTCTCGCCAACAATGCCATG
ACAGACGCTGAGCGCGCCGCGCTCTCGCCGTCTTCAGAGGAGTACCATTT
GCGGGTTGGGGGGTCCAAGACCCAGGTATTAGGGTGGTCGCTGTATACCA
CGTTGTTGTGGCTGCTCAAGTCGTGCATGGCTGTGTTTTACTCTCGATTG
ACATGGCAGGCGATGACTTCGCTGTCGAGGCATTCACCCTCCTAGCCATT
GCCATCGTCACCATCGCCATTCGCATCGTTGCACGATGGTTCACCGCCGG
CTGGAAGAACTTTATGCTCGATGATTATTTGATGCCGTTGGCGGGGGCCG
GCGCCAACGGTGCCTCCCAAGCCGGCAGCTGGGCCTGTCGCGAAACCTTC
GTAGCGGTAATAATCGGCAACGCGCCCATGATCTACCCGATGTGCCGGCG
GCTGGCGATGCGAGCAGGCTGGTACATGTCCACCAAAGGCACCAAGGGCA
GCTCACAGAGCTATCCGTTATCAGAGGGAGCAGCACACTCAGGCACCGAC
AATAGCAAGAACAAGAGACGGAAGTTCAAGCATCCGTTGTCGTTGCCGGA
TACGCAGTGGAATACGATTAGTGATGAGCAGATGATGCTTCCGCCGGGCG
AGTGGGAGGTTAGTCATGCGGCGAGGAGTAACGGGGATGGGAATGGGACG
GATGGGAATAGTAGTAATGGGGTGTATGATGGGGGGTGGAAGGGGGGGAG
GGAGACGGTTGTTTCAACCACTTGAATTCTCTTCAAAGCCCGTCTCCCCT
GGCGCGAGAAACTTGAGCTCCTTATCCTCTTCAGCGGCGGTACCTTTGTC
ATGGCATGTGGCATTCTGCGTTGTGTGTTGATCGTTACTGGCCGGCCTCA
TCAACATGCACATCCGCATCCGCATCGCCTACGTTCTCATCGCAGTCACC
TACATCGCTGTTATCCTCAGCATCCTGGTCGGATGCCACCCCATCCAAAA
GAACTGGCAGATCAACCCCAATCCGGGGAATTATTGTCAGCCGGCTGTCT
CGCATATTGATGTTTACGTGACGGTGGTGTTGAATGTTGCTACGGATGTG
TATTTGATTTCCATTCCGACCCCTGTAGTATACGGTCTCGAAACAGGCGC
CGCCTACTGCGTCAGCGCTTGGTGGAAAGGTCTCGCCAACAATGCCATGA
CAGACGCTGAGCGCGCCGCGCTCTCGCCGTCTTCAGAGGAGTACCATTTG
CGGGTTGGGGGGTCCAAGACCCAGGTATTAGGGTGGTCGCTGTATACCAC
GTTGTTGTGGCTGCTCAAGTCGTGCATGGCTGTGTTTTACTCTCGATTGA
CATGGCAGGCGATGACTTCGCTGTCGAGGCATTCACCCTCCTAGCCATTG
CCATCGTCACCATCGCCATTCGCATCGTTGCACGATGGTTCACCGCCGGC
TGGAAGAACTTTATGCTCGATGATTATTTGATGCCGTTGGCGGGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003211-T1.utr5p1 | KJC3_003211-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1245418..1247138 - |
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