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KJC3_003214-T1, KJC3_003214-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003214-T1
Unique NameKJC3_003214-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1252281..1253576-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003214-T1 ID=KJC3_003214-T1|Name=KJC3_003214-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1296bp|location=Sequence derived from alignment at ch3:1252281..1253576- (Aspergillus niger KJC3)
ATGGGGACGGCGCTCGATGCGCTGAACCACCAGCCGTTGAACTCGCGTCG
TCCTGCGGCCCCGACTTTACCCAGCTTTGAGCTTCCTGCACCCAACTTCC
AGACCAGCGTCAAGTACGCCCATCACAATCCTCCGCCCATCAACCCCAGC
GTCAGCAACCTTCTTACACCACCAGCAACCACCCAATCTGGCGAAACTCT
TCCTGCTACGACCTCGCACACAGCCACCACCACGGCACCCACAAATCCGG
AGTTGGCACCGTACTGGCAGAGCCAGAGCGCATACCAGAGTGGGTCAGGG
GCAGCAGCTGCCCGTCAGTCGTGGAACTCAAGTGTGGTGTCCTATCCAAG
TCGAGACACCTTCTCCCCGTCGGTGAACTCCCTGAATCGCAATCCTGCCA
CGTCGACTCCAGGCACCGAGCATATCACCCAGCCATACGAGATGAATCAT
TTGCCTCCGTTTCACCAATCTGCCTCGGTCTCCACTACTGCACCTGTTCA
GGCGGGTGCTCCTCAACAACATCATGCCATGACACACGCAATGTTGTCAG
CACATAACCCGTTGCCTAATCCAGCGCCGTCGCCGCATCCTCTTCCTTCG
AACGACCCCTACATGGTCAAATCATCGTCTGCCCCAGCGTATGGCACTAT
CCAGCAACTGGCCAGCCCGCCGGGCGGCTATTCGCCGTACGGACAACAGG
GAATCGTGCCCAATCGGGTGGCATCAAATCCGCACCCCTCGCACCACTTG
AATTATCAACGGCAGCCATGGCCGTCATATTCGCTTCCGGCGGTGAACGG
ACCCATCTGGACGAATGTGCACAATCCGAACGGGCAGATGTCACTTACCG
GAAACCTGCAGTCCGGGGTGCTGCCTGGATTGCCTGGGTACAACAGTGGG
CACGTGGCCAATATGCAGCAGATGCAGCAGTTGTATGGGGGTCACCCACC
CCATCCAGGTCACGGCGCTCCCGGACCCACCAACGATCGACCGTTCAAGT
GTGACCAGTGTCCACAAAGCTTCAACCGCAACCATGACTTGAAGCGGCAT
AAGCGAATTCACCTCTCGGTGAAGCCGTTCCCGTGCACCCACTGTGACAA
GAGCTTTTCGCGCAAGGACGCGCTAAAGGTGAGATTCTTACTTACATTCT
GCGTACAAATGATCGGGTCTAACATGTGTGTACAGCGACACATCCTTGTG
AAAGGCTGCGGAAAAGACGGCTCTGATGGCCTGAAGCCAGGGGAGCACGG
AGTGAAGGAGGAGGACCGAAGTGACGAATCGAATGGACAGCACTGA
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Coding sequence (CDS) from alignment at ch3:1252281..1253576-

>KJC3_003214-T1 ID=KJC3_003214-T1|Name=KJC3_003214-T1|organism=Aspergillus niger KJC3|type=CDS|length=2478bp|location=Sequence derived from alignment at ch3:1252281..1253576- (Aspergillus niger KJC3)
CGACACATCCTTGTGAAAGGCTGCGGAAAAGACGGCTCTGATGGCCTGAA
GCCAGGGGAGCACGGAGTGAAGGAGGAGGACCGAAGTGACGAATCGAATG
GACAGCACTGAATGGGGACGGCGCTCGATGCGCTGAACCACCAGCCGTTG
AACTCGCGTCGTCCTGCGGCCCCGACTTTACCCAGCTTTGAGCTTCCTGC
ACCCAACTTCCAGACCAGCGTCAAGTACGCCCATCACAATCCTCCGCCCA
TCAACCCCAGCGTCAGCAACCTTCTTACACCACCAGCAACCACCCAATCT
GGCGAAACTCTTCCTGCTACGACCTCGCACACAGCCACCACCACGGCACC
CACAAATCCGGAGTTGGCACCGTACTGGCAGAGCCAGAGCGCATACCAGA
GTGGGTCAGGGGCAGCAGCTGCCCGTCAGTCGTGGAACTCAAGTGTGGTG
TCCTATCCAAGTCGAGACACCTTCTCCCCGTCGGTGAACTCCCTGAATCG
CAATCCTGCCACGTCGACTCCAGGCACCGAGCATATCACCCAGCCATACG
AGATGAATCATTTGCCTCCGTTTCACCAATCTGCCTCGGTCTCCACTACT
GCACCTGTTCAGGCGGGTGCTCCTCAACAACATCATGCCATGACACACGC
AATGTTGTCAGCACATAACCCGTTGCCTAATCCAGCGCCGTCGCCGCATC
CTCTTCCTTCGAACGACCCCTACATGGTCAAATCATCGTCTGCCCCAGCG
TATGGCACTATCCAGCAACTGGCCAGCCCGCCGGGCGGCTATTCGCCGTA
CGGACAACAGGGAATCGTGCCCAATCGGGTGGCATCAAATCCGCACCCCT
CGCACCACTTGAATTATCAACGGCAGCCATGGCCGTCATATTCGCTTCCG
GCGGTGAACGGACCCATCTGGACGAATGTGCACAATCCGAACGGGCAGAT
GTCACTTACCGGAAACCTGCAGTCCGGGGTGCTGCCTGGATTGCCTGGGT
ACAACAGTGGGCACGTGGCCAATATGCAGCAGATGCAGCAGTTGTATGGG
GGTCACCCACCCCATCCAGGTCACGGCGCTCCCGGACCCACCAACGATCG
ACCGTTCAAGTGTGACCAGTGTCCACAAAGCTTCAACCGCAACCATGACT
TGAAGCGGCATAAGCGAATTCACCTCTCGGTGAAGCCGTTCCCGTGCACC
CACTGTGACAAGAGCTTTTCGCGCAAGGACGCGCTAAAGCGACACATCCT
TGTGAAAGGCTGCGGAAAAGACGGCTCTGATGGCCTGAAGCCAGGGGAGC
ACGGAGTGAAGGAGGAGGACCGAAGTGACGAATCGAATGGACAGCACTGA
ATGGGGACGGCGCTCGATGCGCTGAACCACCAGCCGTTGAACTCGCGTCG
TCCTGCGGCCCCGACTTTACCCAGCTTTGAGCTTCCTGCACCCAACTTCC
AGACCAGCGTCAAGTACGCCCATCACAATCCTCCGCCCATCAACCCCAGC
GTCAGCAACCTTCTTACACCACCAGCAACCACCCAATCTGGCGAAACTCT
TCCTGCTACGACCTCGCACACAGCCACCACCACGGCACCCACAAATCCGG
AGTTGGCACCGTACTGGCAGAGCCAGAGCGCATACCAGAGTGGGTCAGGG
GCAGCAGCTGCCCGTCAGTCGTGGAACTCAAGTGTGGTGTCCTATCCAAG
TCGAGACACCTTCTCCCCGTCGGTGAACTCCCTGAATCGCAATCCTGCCA
CGTCGACTCCAGGCACCGAGCATATCACCCAGCCATACGAGATGAATCAT
TTGCCTCCGTTTCACCAATCTGCCTCGGTCTCCACTACTGCACCTGTTCA
GGCGGGTGCTCCTCAACAACATCATGCCATGACACACGCAATGTTGTCAG
CACATAACCCGTTGCCTAATCCAGCGCCGTCGCCGCATCCTCTTCCTTCG
AACGACCCCTACATGGTCAAATCATCGTCTGCCCCAGCGTATGGCACTAT
CCAGCAACTGGCCAGCCCGCCGGGCGGCTATTCGCCGTACGGACAACAGG
GAATCGTGCCCAATCGGGTGGCATCAAATCCGCACCCCTCGCACCACTTG
AATTATCAACGGCAGCCATGGCCGTCATATTCGCTTCCGGCGGTGAACGG
ACCCATCTGGACGAATGTGCACAATCCGAACGGGCAGATGTCACTTACCG
GAAACCTGCAGTCCGGGGTGCTGCCTGGATTGCCTGGGTACAACAGTGGG
CACGTGGCCAATATGCAGCAGATGCAGCAGTTGTATGGGGGTCACCCACC
CCATCCAGGTCACGGCGCTCCCGGACCCACCAACGATCGACCGTTCAAGT
GTGACCAGTGTCCACAAAGCTTCAACCGCAACCATGACTTGAAGCGGCAT
AAGCGAATTCACCTCTCGGTGAAGCCGTTCCCGTGCACCCACTGTGACAA
GAGCTTTTCGCGCAAGGACGCGCTAAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003214KJC3_003214Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003214-T1KJC3_003214-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003214-T1.cdsKJC3_003214-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003214-T1.exon2KJC3_003214-T1.exon2Aspergillus niger KJC3exon
KJC3_003214-T1.exon1KJC3_003214-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF13894
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1252281..1253576 -
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