You are here

Home

KJC3_003217-T1, KJC3_003217-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003217-T1
Unique NameKJC3_003217-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1269398..1271203+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003217-T1 ID=KJC3_003217-T1|Name=KJC3_003217-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1806bp|location=Sequence derived from alignment at ch3:1269398..1271203+ (Aspergillus niger KJC3)
CTCGCTTGTAAACATGTCACCCAAGCTATGAACTATTCCCGCAAAATTCA
AGAGGTAGTATGATTTTGGAAAGTAAAATTAGATACATGTTTGAGAGCGG
TTGTAGCTCCACGTGTGAGAAGATTCACAGATGCCTTCGAATGATGGCAG
GGATGGTGGGTCTGACAGGTGTATCAAAGCTCAGCCCAGTCCAGGCTAAA
CCCCCGCATATGCAAGATACTGTTACCCTTCTTTAACATTGAAGCTCCGT
GAAGACATATTGCAGTGATCTTTTATCACTGTCCAAGTGATTTGATACGA
ACTCCTGACCCTGGGAAAGGGGAAAAGGGAAATCCGGGCGAAATCGGGAT
TGGCGGGGACGGATTCGGATGACGTCGAGGGCAGGTGGGGTAGCTTCACT
GCTACTCCGTTACGGTGTGTCTGCTCGGCCTCGCATCTCGGCTCTTTTCT
TTCCCCAGCTTCATTTAACCCTGTTGTAATCTCTTCCTCAGCTTCCTTCT
TCTTCTTCTTCTTCTTTTCCCCCTCTTCCATTTTCTCATCCATCCATCCC
ACATCCATCCCGATTCATCCCAATTCATCCAACTCATTTTCCCTGTGCGT
CCGCTATCCGCCTGTTCTTCTAACATGTTCTCCAGACAGCTTCTGACTCT
CCCACTAAGAAGGTCCTTCTTGACCCCCGTCACACCCCTCTCTAGTCGTA
TCGTGCGCCCTCTTCACTGTTCCTCTGCAGCCATGTCTGGTGTCAACAAG
GCTTGTTGCTCGTGAGTAATGAATGCCCTGTCAATGGCTTACCTCCAATG
CACCGTCCTCCATACTCACCGTGACCAGCATCCCCCCGATCGTGGCCCAG
GGCTACCAGGGCAAGGGCGAATACAAGACCATCAATGGCTTGAAGACTTG
TACGTCAAATCCAATCGACCAGAGAGATCCAGCTAATTCCCTACCCAGAC
GTCACTGGCCCCGAATCCGCTACCAAGGCCATCCTCGTCATCTACGGTAA
GATGGACCCGTCCCCGATCTGTCCCAAGCTCCATGCTAAGTTTCATGATC
ACTTCCAGACATTTTCGGTTTCTTCCCCCAGACCATCCAGGGTGCCGATA
TCCTGGCCACCGCGAGCGAGCAAAAGTACCGCGTTTTCATCCCCGACTTC
TTCCAGGGCGAGCCTGCCGACATCACCTGGTTCCCTCCTCAGACCGACGA
CCACAAGCAGAAGCTGGGTAACTTCTTCCAGACCAAGGCTGCTCCCCCCG
CAAACCTGCCCAAGATCCCCTCCATTGTCTCCGAGGCCAACAAGCTTGCT
GCTGGCGGCAGCTTCCAGTCCTGGTCGATCCTGGGTTACTGCTGGGGAGG
CAAGATCACGACCCTGGCGTCTGGTCAGGATAACAAGCTGTTCACGGCGG
CGGTGCAATGCCACCCGGCGATGCTCGACCCCAACGATGCCAAGAGTGTC
AACATTCCGATGGCCGTGCTGGCCTCCAAGGACGAGAACCCTAAGGATGT
GGAGGCGTTCGGTGCCAACTTGAAGCAGGCCAACTATGTTGAGACCTTCT
CCACCCAGATTCACGGATGGATGGCTGCTCGCTCCAACCTCGAAGATGAG
CAGGTGCGCAAGGAGTACGAGCGGGGATACCGGACCGCACTGGACTTCCT
CCAGAAGCACGCCTAAACAACGTGATGGTCAACATGCCATAATGAAAGGA
ATTGAATAATGAATTTAGTTTACCCAAAAGTGTACGTATGACATTCAGCG
AATGCCCAAGCACAATTTCATTATGATTGTGACATCCATCTGCATTCCGA
CTCAGC
back to top

Coding sequence (CDS) from alignment at ch3:1269398..1271203+

>KJC3_003217-T1 ID=KJC3_003217-T1|Name=KJC3_003217-T1|organism=Aspergillus niger KJC3|type=CDS|length=3024bp|location=Sequence derived from alignment at ch3:1269398..1271203+ (Aspergillus niger KJC3)
ATGTCTGGTGTCAACAAGGCTTGTTGCTCCATCCCCCCGATCGTGGCCCA
GGGCTACCAGGGCAAGGGCGAATACAAGACCATCAATGGCTTGAAGACTT
ACGTCACTGGCCCCGAATCCGCTACCAAGGCCATCCTCGTCATCTACGAC
ATTTTCGGTTTCTTCCCCCAGACCATCCAGGGTGCCGATATCCTGGCCAC
CGCGAGCGAGCAAAAGTACCGCGTTTTCATCCCCGACTTCTTCCAGGGCG
AGCCTGCCGACATCACCTGGTTCCCTCCTCAGACCGACGACCACAAGCAG
AAGCTGGGTAACTTCTTCCAGACCAAGGCTGCTCCCCCCGCAAACCTGCC
CAAGATCCCCTCCATTGTCTCCGAGGCCAACAAGCTTGCTGCTGGCGGCA
GCTTCCAGTCCTGGTCGATCCTGGGTTACTGCTGGGGAGGCAAGATCACG
ACCCTGGCGTCTGGTCAGGATAACAAGCTGTTCACGGCGGCGGTGCAATG
CCACCCGGCGATGCTCGACCCCAACGATGCCAAGAGTGTCAACATTCCGA
TGGCCGTGCTGGCCTCCAAGGACGAGAACCCTAAGGATGTGGAGGCGTTC
GGTGCCAACTTGAAGCAGGCCAACTATGTTGAGACCTTCTCCACCCAGAT
TCACGGATGGATGGCTGCTCGCTCCAACCTCGAAGATGAGCAGGTGCGCA
AGGAGTACGAGCGGGGATACCGGACCGCACTGGACTTCCTCCAGAAGCAC
GCCTAAATGTCTGGTGTCAACAAGGCTTGTTGCTCCATCCCCCCGATCGT
GGCCCAGGGCTACCAGGGCAAGGGCGAATACAAGACCATCAATGGCTTGA
AGACTTACGTCACTGGCCCCGAATCCGCTACCAAGGCCATCCTCGTCATC
TACGACATTTTCGGTTTCTTCCCCCAGACCATCCAGGGTGCCGATATCCT
GGCCACCGCGAGCGAGCAAAAGTACCGCGTTTTCATCCCCGACTTCTTCC
AGGGCGAGCCTGCCGACATCACCTGGTTCCCTCCTCAGACCGACGACCAC
AAGCAGAAGCTGGGTAACTTCTTCCAGACCAAGGCTGCTCCCCCCGCAAA
CCTGCCCAAGATCCCCTCCATTGTCTCCGAGGCCAACAAGCTTGCTGCTG
GCGGCAGCTTCCAGTCCTGGTCGATCCTGGGTTACTGCTGGGGAGGCAAG
ATCACGACCCTGGCGTCTGGTCAGGATAACAAGCTGTTCACGGCGGCGGT
GCAATGCCACCCGGCGATGCTCGACCCCAACGATGCCAAGAGTGTCAACA
TTCCGATGGCCGTGCTGGCCTCCAAGGACGAGAACCCTAAGGATGTGGAG
GCGTTCGGTGCCAACTTGAAGCAGGCCAACTATGTTGAGACCTTCTCCAC
CCAGATTCACGGATGGATGGCTGCTCGCTCCAACCTCGAAGATGAGCAGG
TGCGCAAGGAGTACGAGCGGGGATACCGGACCGCACTGGACTTCCTCCAG
AAGCACGCCTAAATGTCTGGTGTCAACAAGGCTTGTTGCTCCATCCCCCC
GATCGTGGCCCAGGGCTACCAGGGCAAGGGCGAATACAAGACCATCAATG
GCTTGAAGACTTACGTCACTGGCCCCGAATCCGCTACCAAGGCCATCCTC
GTCATCTACGACATTTTCGGTTTCTTCCCCCAGACCATCCAGGGTGCCGA
TATCCTGGCCACCGCGAGCGAGCAAAAGTACCGCGTTTTCATCCCCGACT
TCTTCCAGGGCGAGCCTGCCGACATCACCTGGTTCCCTCCTCAGACCGAC
GACCACAAGCAGAAGCTGGGTAACTTCTTCCAGACCAAGGCTGCTCCCCC
CGCAAACCTGCCCAAGATCCCCTCCATTGTCTCCGAGGCCAACAAGCTTG
CTGCTGGCGGCAGCTTCCAGTCCTGGTCGATCCTGGGTTACTGCTGGGGA
GGCAAGATCACGACCCTGGCGTCTGGTCAGGATAACAAGCTGTTCACGGC
GGCGGTGCAATGCCACCCGGCGATGCTCGACCCCAACGATGCCAAGAGTG
TCAACATTCCGATGGCCGTGCTGGCCTCCAAGGACGAGAACCCTAAGGAT
GTGGAGGCGTTCGGTGCCAACTTGAAGCAGGCCAACTATGTTGAGACCTT
CTCCACCCAGATTCACGGATGGATGGCTGCTCGCTCCAACCTCGAAGATG
AGCAGGTGCGCAAGGAGTACGAGCGGGGATACCGGACCGCACTGGACTTC
CTCCAGAAGCACGCCTAAATGTCTGGTGTCAACAAGGCTTGTTGCTCCAT
CCCCCCGATCGTGGCCCAGGGCTACCAGGGCAAGGGCGAATACAAGACCA
TCAATGGCTTGAAGACTTACGTCACTGGCCCCGAATCCGCTACCAAGGCC
ATCCTCGTCATCTACGACATTTTCGGTTTCTTCCCCCAGACCATCCAGGG
TGCCGATATCCTGGCCACCGCGAGCGAGCAAAAGTACCGCGTTTTCATCC
CCGACTTCTTCCAGGGCGAGCCTGCCGACATCACCTGGTTCCCTCCTCAG
ACCGACGACCACAAGCAGAAGCTGGGTAACTTCTTCCAGACCAAGGCTGC
TCCCCCCGCAAACCTGCCCAAGATCCCCTCCATTGTCTCCGAGGCCAACA
AGCTTGCTGCTGGCGGCAGCTTCCAGTCCTGGTCGATCCTGGGTTACTGC
TGGGGAGGCAAGATCACGACCCTGGCGTCTGGTCAGGATAACAAGCTGTT
CACGGCGGCGGTGCAATGCCACCCGGCGATGCTCGACCCCAACGATGCCA
AGAGTGTCAACATTCCGATGGCCGTGCTGGCCTCCAAGGACGAGAACCCT
AAGGATGTGGAGGCGTTCGGTGCCAACTTGAAGCAGGCCAACTATGTTGA
GACCTTCTCCACCCAGATTCACGGATGGATGGCTGCTCGCTCCAACCTCG
AAGATGAGCAGGTGCGCAAGGAGTACGAGCGGGGATACCGGACCGCACTG
GACTTCCTCCAGAAGCACGCCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003217KJC3_003217Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003217-T1KJC3_003217-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003217-T1.utr5p1KJC3_003217-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_003217-T1.utr5p2KJC3_003217-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003217-T1.exon1KJC3_003217-T1.exon1Aspergillus niger KJC3exon
KJC3_003217-T1.exon2KJC3_003217-T1.exon2Aspergillus niger KJC3exon
KJC3_003217-T1.exon3KJC3_003217-T1.exon3Aspergillus niger KJC3exon
KJC3_003217-T1.exon4KJC3_003217-T1.exon4Aspergillus niger KJC3exon
KJC3_003217-T1.exon5KJC3_003217-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003217-T1.cdsKJC3_003217-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003217-T1.utr3p1KJC3_003217-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR002925
DBxrefPFAM:PF01738
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1269398..1271203 +
Powered by Drupal