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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1271386..1275263+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003218-T1 ID=KJC3_003218-T1|Name=KJC3_003218-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3878bp|location=Sequence derived from alignment at ch3:1271386..1275263+ (Aspergillus niger KJC3)
CTTCCACCTCCCTCATCAGTCCGGATGCAGCCATCCCCTATCACCTTACC
AGTGGACTGATCGGTACTAGCTGGACTAGATCTCTTTTTTTCTTTGGCTT
CGTCCCCCACATCAATTGTTTATATCCTCCCAACTCTTCTTGTAACCTCT
CATTCGGGAGACCGCAATGAGTGAGGACATCATTCGAGTGTGGCAGCGTA
TCTGTTGGTCTGACTGATATCGCCCACACATTGTTCCTACCCTTATTCTC
CATTACACAATATCAAAAGAATCGTACCTGTTGGTCTCCGACGATAACAG
AATGTCGTTTTTCTTTGGACGCCGCCATTCCATCTCATCCGCCACTCTGA
GTCAGGGCGATAACCTTCCCAGAAGTGAGAGGGGGAGGAGAGCCTCATTA
CCCAATGTGTCCGATCCGAACAATACCGGCTCCCACGCTAAAGGTGTGAT
CCACGACATATTCCACAAGCATCGAGGGGACTCGGAAACAGGCTCTTCAA
CTGGGACAAAGACGCCTAAATCGGTAAGGATATTGGCGCGGTCAAGGAGC
TTTGCTACGGATAGACTCTGACCGACTTAGAAGACTGATACAGCCCGATC
CAATTCCACAAAGCCGGATACCCACTCCCAGGACGAGCAACCTGGTGCCC
ACCACCATTCGGAGCAGGCTGCCAAACCTCGTCAATCACACCATTACGAG
GGTCCATCTTCACATAACCAGCTGACGAAAAAGGACATCGAAACGATATT
TTCGGGAGCTCCATACTTCCTGCTGGAGAAGGGAAAGCATGGGCTCTTTT
ACCCACAGATAATATTCCCTTTTGATGATCACGATCCCACCATTCAAAGT
CTCGGGGATAGACGGCCGCTTCCTCATGCCTCCTACACCCTGTGTACTCT
TCATGCTCATTTGCCAGTACCGGACGACTGGGTGATTGAAGGGGAAACGC
CGGTTCATCTGGGGCATTGGAAACGATCGGAAGCTCCGAAGCGGGCGACT
TTTGATGTTGGAGTTCACGAAGTACCCAATATGCTGTCAGTCAATGGCAA
AGACGCTGGTACGATCGGTTTCCGTCACTTCCTCGAACTGCCCGTCGCCG
ACTCGGTCTTATACGCGGGGCCCGTGAAACCACGACCATGCTCTGACCTC
CTTCACATCTCATCGCTACCAGCAACCGAGGCGTATGAATTGATGGGGCA
CTATAACGACCCGTATGCCCAGTGCGCGGATGGTACCATCCATGACCGGA
AGAAGTTGCTCTGCGAAGGACCGGTAGCTTGGAAGAGGATCGGTGTCCGC
GATGTCGACTTGCGAGCCCTAGTGGAGCGTCTCCAGACCCTGAAGACCCT
CCGCTACGACATTCTGCACGGGGAGGCCCCAAAGACGATTCTAGACACAG
AAAGCACTCGAGAGCTGTACAGTGGACTGTTCAATCGGTTTCTGTACCCA
CCGGTGCGGTTTCTGCTTGCGGATGCCGGCGATCCTCATAGTTTGAAGGC
TCAAATCAAAGCTCTGACAGTGGTGTTGGCTACCCCTGGGGCGTGGTTTG
ACTTCAGTCTGATCGATTGGCGATTGCATCTTGGACAAGTACTGTTTGAG
AATCCCCCACACAGCGACGGCGACTTCCTTGATCCGGACAAGTCTGACAA
ACCCTGGGTGCATTTCACACTGGAACGCAAGTGGCTTCTCGTCCAGATGC
TGCTCGCTGCGGAGCTACTAATGCGTTTGGATGCCACTGTTCGAGTAGGA
ATGCTGCAGAATGCGCGGGATATCGATGTCTCGGTGCATGATGTGTACGA
GTTTGACCGGCTACGTAGTGGTAAGCTGAATTGGGACCTGGTTACAGTTC
GACGATTTCTAGACAGCTTTCGCTTTGCCTACAACCCTGTGGAGCCGGAC
AACCCTTCTCCGACCATACCTGCACCGAGCAAGTCGCCTGAGCGGCATCA
TCATCGTGGATTCCTCGAAGCCTTCACACACCACTCGACATCATCCGCCC
ATAATGATGAATCCGCCTGGCGGTGTCACCTAACTCCCAGCCATGTTGAC
CAGCAACTAAAAGGATTGTTCGTTTTTGCAGACAACATTGGCTGGCCAGG
ACTGGATACATTCAAGAGTGCACTGCGATCCAAACTTGAGGGTGATGGTG
TGGAAAAGAAAATCGAAGCCGCCTACACCATACCTCTTACCAATGCGCTA
CCTGCGGAGTATTCCACTACGGACTTGACAAAAGAGATCTATAGCAGATC
TCCATCGCGCCGGTTGCTCCTCCTTCATTCTCCTCACAGCATACGTCCCC
TGAACATTGGAGGTTGGATCACGCGTAGCTGGCTCGCGGGGTTGGTAATC
CCTGGCGAGTCCATCAGCCACCTTCTCATGGCAACCATCCTAGAAAATGA
CGAAGAGGCTATGGCTACACTTGGTCCAGTCGCGAACGTTTATGGTGGTT
TCACGTACAAGGGAAAGACCTGGTGGAGTAAGAAGTGCATTGTCGGACGA
GTATTGGCAAGCCAACCGGGTACTAAGGTCTGTTTGGCGTGGCTGGCAAG
CTCTATATTGCCCAAAGACTCGGAGAGTGGAGAGCGATTGGTCAACACAT
GGTTTGAGGTGGATGTCCGCGAGCCGCCCCGGCGTCCAGGCAAGCCACGC
ATCAAACACGGAAACAGGCTGTCCTTTGACTCTACGCCGCTTGGCTTGGG
AGAGCTTACGAGTGGAGTATTCTTGCTGCCTGTCGATGGCCCCTCCGATA
GCTGGTCGAAAGCAAACATTAACTTCCAGGACCTCACCTTCTCCCTCGAT
GCGAAACGAACAGACAACAACCTAACCGTAGTTAAAAAGGCCTTTGCCAG
TTTCCTTCTCGCTTCCACTGCTACCGGGCCAACCCCAGTGTCGTTTGAAT
TGGCCTACAATGTACGATTTATTTCTTCCCACGAGTGCCGTCCACCCGGG
GGGTCGGTCAACTATCAGAATCACCCAAGCGCCCCGGATGGCGGGTCATC
ATCTTCGTCATCAAGCCATGTCTCCCATAGACACCACCGTTTGCCGGGCC
ACCCGTTGCACCGATCGTACGCGTACAAGTGGGTTCCTCTAGAATCCCTT
TCGGAGACATCTCACTCGGATAGCCACAGCAGCGGACTAGTTAAGGAAGA
GATCCTCCTTCTTGACGCGCGGGGCTCGCACGACAAGGAAACATTTGCAC
GAGCATGGTGTGCGTCTGTTGGACATCATGCCGTCATTGGCAAGGTTGGA
CGGACCTGTCTGGCATGTTGCATTCGAGAAGCCCGAGCGTTACAGGTGAA
GGTGGTGATTCGCATTGGGGACGGGATGTCGACGCCCTCTTCGTCGATCC
AAGTATTGTATGGTGGAGAGTAGGATAGATTGATTGGTTGGTACTTAGAA
GAGTCTGGTTTCGGTCGCACGTAGTGATGCCTGCCAATTTCCCGTGTTGT
TTGTATGTAGTAGTATCCTTCAAGAATCCTCTGATCTAGACATGGCTATT
TGTAGGTAGCTGCCTGGTAGTCTGGAGGTTAGCTGCGTAGTGTTACGGTG
CACGGGATCCTTCCCTACAGGTCGGGGCTGTTTGCCAGAAAAGCAAATAC
CCGTTTGGTGTCACCCACTCCTTCGTCTTCCTTTCTTGTTCTTCCTTGCT
CTTTTGATCTCTTCTTCAGAGGTGGGGATTTCATCCCGGGTGGCCTTCTT
CTGAGCCATAAATACTTCCAGGCCTCCAGAGCATCTTCCGTCGCTTCTCA
TCCCCATCACTTCCTATATACTACTGCTTTTCTTATATAATATTTCGCAA
TTCTGTATACTATACGATGCTGCTCTATACAGCCCATCAAGTCAGACATC
TTTCCCATTCATTTTACCTCTCTGTGCT back to topCoding sequence (CDS) from alignment at ch3:1271386..1275263+ >KJC3_003218-T1 ID=KJC3_003218-T1|Name=KJC3_003218-T1|organism=Aspergillus niger KJC3|type=CDS|length=6024bp|location=Sequence derived from alignment at ch3:1271386..1275263+ (Aspergillus niger KJC3)
ATGTCGTTTTTCTTTGGACGCCGCCATTCCATCTCATCCGCCACTCTGAG
TCAGGGCGATAACCTTCCCAGAAGTGAGAGGGGGAGGAGAGCCTCATTAC
CCAATGTGTCCGATCCGAACAATACCGGCTCCCACGCTAAAGGTGTGATC
CACGACATATTCCACAAGCATCGAGGGGACTCGGAAACAGGCTCTTCAAC
TGGGACAAAGACGCCTAAATCGACTGATACAGCCCGATCCAATTCCACAA
AGCCGGATACCCACTCCCAGGACGAGCAACCTGGTGCCCACCACCATTCG
GAGCAGGCTGCCAAACCTCGTCAATCACACCATTACGAGGGTCCATCTTC
ACATAACCAGCTGACGAAAAAGGACATCGAAACGATATTTTCGGGAGCTC
CATACTTCCTGCTGGAGAAGGGAAAGCATGGGCTCTTTTACCCACAGATA
ATATTCCCTTTTGATGATCACGATCCCACCATTCAAAGTCTCGGGGATAG
ACGGCCGCTTCCTCATGCCTCCTACACCCTGTGTACTCTTCATGCTCATT
TGCCAGTACCGGACGACTGGGTGATTGAAGGGGAAACGCCGGTTCATCTG
GGGCATTGGAAACGATCGGAAGCTCCGAAGCGGGCGACTTTTGATGTTGG
AGTTCACGAAGTACCCAATATGCTGTCAGTCAATGGCAAAGACGCTGGTA
CGATCGGTTTCCGTCACTTCCTCGAACTGCCCGTCGCCGACTCGGTCTTA
TACGCGGGGCCCGTGAAACCACGACCATGCTCTGACCTCCTTCACATCTC
ATCGCTACCAGCAACCGAGGCGTATGAATTGATGGGGCACTATAACGACC
CGTATGCCCAGTGCGCGGATGGTACCATCCATGACCGGAAGAAGTTGCTC
TGCGAAGGACCGGTAGCTTGGAAGAGGATCGGTGTCCGCGATGTCGACTT
GCGAGCCCTAGTGGAGCGTCTCCAGACCCTGAAGACCCTCCGCTACGACA
TTCTGCACGGGGAGGCCCCAAAGACGATTCTAGACACAGAAAGCACTCGA
GAGCTGTACAGTGGACTGTTCAATCGGTTTCTGTACCCACCGGTGCGGTT
TCTGCTTGCGGATGCCGGCGATCCTCATAGTTTGAAGGCTCAAATCAAAG
CTCTGACAGTGGTGTTGGCTACCCCTGGGGCGTGGTTTGACTTCAGTCTG
ATCGATTGGCGATTGCATCTTGGACAAGTACTGTTTGAGAATCCCCCACA
CAGCGACGGCGACTTCCTTGATCCGGACAAGTCTGACAAACCCTGGGTGC
ATTTCACACTGGAACGCAAGTGGCTTCTCGTCCAGATGCTGCTCGCTGCG
GAGCTACTAATGCGTTTGGATGCCACTGTTCGAGTAGGAATGCTGCAGAA
TGCGCGGGATATCGATGTCTCGGTGCATGATGTGTACGAGTTTGACCGGC
TACGTAGTGGTAAGCTGAATTGGGACCTGGTTACAGTTCGACGATTTCTA
GACAGCTTTCGCTTTGCCTACAACCCTGTGGAGCCGGACAACCCTTCTCC
GACCATACCTGCACCGAGCAAGTCGCCTGAGCGGCATCATCATCGTGGAT
TCCTCGAAGCCTTCACACACCACTCGACATCATCCGCCCATAATGATGAA
TCCGCCTGGCGGTGTCACCTAACTCCCAGCCATGTTGACCAGCAACTAAA
AGGATTGTTCGTTTTTGCAGACAACATTGGCTGGCCAGGACTGGATACAT
TCAAGAGTGCACTGCGATCCAAACTTGAGGGTGATGGTGTGGAAAAGAAA
ATCGAAGCCGCCTACACCATACCTCTTACCAATGCGCTACCTGCGGAGTA
TTCCACTACGGACTTGACAAAAGAGATCTATAGCAGATCTCCATCGCGCC
GGTTGCTCCTCCTTCATTCTCCTCACAGCATACGTCCCCTGAACATTGGA
GGTTGGATCACGCGTAGCTGGCTCGCGGGGTTGGTAATCCCTGGCGAGTC
CATCAGCCACCTTCTCATGGCAACCATCCTAGAAAATGACGAAGAGGCTA
TGGCTACACTTGGTCCAGTCGCGAACGTTTATGGTGGTTTCACGTACAAG
GGAAAGACCTGGTGGAGTAAGAAGTGCATTGTCGGACGAGTATTGGCAAG
CCAACCGGGTACTAAGGTCTGTTTGGCGTGGCTGGCAAGCTCTATATTGC
CCAAAGACTCGGAGAGTGGAGAGCGATTGGTCAACACATGGTTTGAGGTG
GATGTCCGCGAGCCGCCCCGGCGTCCAGGCAAGCCACGCATCAAACACGG
AAACAGGCTGTCCTTTGACTCTACGCCGCTTGGCTTGGGAGAGCTTACGA
GTGGAGTATTCTTGCTGCCTGTCGATGGCCCCTCCGATAGCTGGTCGAAA
GCAAACATTAACTTCCAGGACCTCACCTTCTCCCTCGATGCGAAACGAAC
AGACAACAACCTAACCGTAGTTAAAAAGGCCTTTGCCAGTTTCCTTCTCG
CTTCCACTGCTACCGGGCCAACCCCAGTGTCGTTTGAATTGGCCTACAAT
GTACGATTTATTTCTTCCCACGAGTGCCGTCCACCCGGGGGGTCGGTCAA
CTATCAGAATCACCCAAGCGCCCCGGATGGCGGGTCATCATCTTCGTCAT
CAAGCCATGTCTCCCATAGACACCACCGTTTGCCGGGCCACCCGTTGCAC
CGATCGTACGCGTACAAGTGGGTTCCTCTAGAATCCCTTTCGGAGACATC
TCACTCGGATAGCCACAGCAGCGGACTAGTTAAGGAAGAGATCCTCCTTC
TTGACGCGCGGGGCTCGCACGACAAGGAAACATTTGCACGAGCATGGTGT
GCGTCTGTTGGACATCATGCCGTCATTGGCAAGGTTGGACGGACCTGTCT
GGCATGTTGCATTCGAGAAGCCCGAGCGTTACAGGTGAAGGTGGTGATTC
GCATTGGGGACGGGATGTCGACGCCCTCTTCGTCGATCCAAGTATTGTAT
GGTGGAGAGTAGATGTCGTTTTTCTTTGGACGCCGCCATTCCATCTCATC
CGCCACTCTGAGTCAGGGCGATAACCTTCCCAGAAGTGAGAGGGGGAGGA
GAGCCTCATTACCCAATGTGTCCGATCCGAACAATACCGGCTCCCACGCT
AAAGGTGTGATCCACGACATATTCCACAAGCATCGAGGGGACTCGGAAAC
AGGCTCTTCAACTGGGACAAAGACGCCTAAATCGACTGATACAGCCCGAT
CCAATTCCACAAAGCCGGATACCCACTCCCAGGACGAGCAACCTGGTGCC
CACCACCATTCGGAGCAGGCTGCCAAACCTCGTCAATCACACCATTACGA
GGGTCCATCTTCACATAACCAGCTGACGAAAAAGGACATCGAAACGATAT
TTTCGGGAGCTCCATACTTCCTGCTGGAGAAGGGAAAGCATGGGCTCTTT
TACCCACAGATAATATTCCCTTTTGATGATCACGATCCCACCATTCAAAG
TCTCGGGGATAGACGGCCGCTTCCTCATGCCTCCTACACCCTGTGTACTC
TTCATGCTCATTTGCCAGTACCGGACGACTGGGTGATTGAAGGGGAAACG
CCGGTTCATCTGGGGCATTGGAAACGATCGGAAGCTCCGAAGCGGGCGAC
TTTTGATGTTGGAGTTCACGAAGTACCCAATATGCTGTCAGTCAATGGCA
AAGACGCTGGTACGATCGGTTTCCGTCACTTCCTCGAACTGCCCGTCGCC
GACTCGGTCTTATACGCGGGGCCCGTGAAACCACGACCATGCTCTGACCT
CCTTCACATCTCATCGCTACCAGCAACCGAGGCGTATGAATTGATGGGGC
ACTATAACGACCCGTATGCCCAGTGCGCGGATGGTACCATCCATGACCGG
AAGAAGTTGCTCTGCGAAGGACCGGTAGCTTGGAAGAGGATCGGTGTCCG
CGATGTCGACTTGCGAGCCCTAGTGGAGCGTCTCCAGACCCTGAAGACCC
TCCGCTACGACATTCTGCACGGGGAGGCCCCAAAGACGATTCTAGACACA
GAAAGCACTCGAGAGCTGTACAGTGGACTGTTCAATCGGTTTCTGTACCC
ACCGGTGCGGTTTCTGCTTGCGGATGCCGGCGATCCTCATAGTTTGAAGG
CTCAAATCAAAGCTCTGACAGTGGTGTTGGCTACCCCTGGGGCGTGGTTT
GACTTCAGTCTGATCGATTGGCGATTGCATCTTGGACAAGTACTGTTTGA
GAATCCCCCACACAGCGACGGCGACTTCCTTGATCCGGACAAGTCTGACA
AACCCTGGGTGCATTTCACACTGGAACGCAAGTGGCTTCTCGTCCAGATG
CTGCTCGCTGCGGAGCTACTAATGCGTTTGGATGCCACTGTTCGAGTAGG
AATGCTGCAGAATGCGCGGGATATCGATGTCTCGGTGCATGATGTGTACG
AGTTTGACCGGCTACGTAGTGGTAAGCTGAATTGGGACCTGGTTACAGTT
CGACGATTTCTAGACAGCTTTCGCTTTGCCTACAACCCTGTGGAGCCGGA
CAACCCTTCTCCGACCATACCTGCACCGAGCAAGTCGCCTGAGCGGCATC
ATCATCGTGGATTCCTCGAAGCCTTCACACACCACTCGACATCATCCGCC
CATAATGATGAATCCGCCTGGCGGTGTCACCTAACTCCCAGCCATGTTGA
CCAGCAACTAAAAGGATTGTTCGTTTTTGCAGACAACATTGGCTGGCCAG
GACTGGATACATTCAAGAGTGCACTGCGATCCAAACTTGAGGGTGATGGT
GTGGAAAAGAAAATCGAAGCCGCCTACACCATACCTCTTACCAATGCGCT
ACCTGCGGAGTATTCCACTACGGACTTGACAAAAGAGATCTATAGCAGAT
CTCCATCGCGCCGGTTGCTCCTCCTTCATTCTCCTCACAGCATACGTCCC
CTGAACATTGGAGGTTGGATCACGCGTAGCTGGCTCGCGGGGTTGGTAAT
CCCTGGCGAGTCCATCAGCCACCTTCTCATGGCAACCATCCTAGAAAATG
ACGAAGAGGCTATGGCTACACTTGGTCCAGTCGCGAACGTTTATGGTGGT
TTCACGTACAAGGGAAAGACCTGGTGGAGTAAGAAGTGCATTGTCGGACG
AGTATTGGCAAGCCAACCGGGTACTAAGGTCTGTTTGGCGTGGCTGGCAA
GCTCTATATTGCCCAAAGACTCGGAGAGTGGAGAGCGATTGGTCAACACA
TGGTTTGAGGTGGATGTCCGCGAGCCGCCCCGGCGTCCAGGCAAGCCACG
CATCAAACACGGAAACAGGCTGTCCTTTGACTCTACGCCGCTTGGCTTGG
GAGAGCTTACGAGTGGAGTATTCTTGCTGCCTGTCGATGGCCCCTCCGAT
AGCTGGTCGAAAGCAAACATTAACTTCCAGGACCTCACCTTCTCCCTCGA
TGCGAAACGAACAGACAACAACCTAACCGTAGTTAAAAAGGCCTTTGCCA
GTTTCCTTCTCGCTTCCACTGCTACCGGGCCAACCCCAGTGTCGTTTGAA
TTGGCCTACAATGTACGATTTATTTCTTCCCACGAGTGCCGTCCACCCGG
GGGGTCGGTCAACTATCAGAATCACCCAAGCGCCCCGGATGGCGGGTCAT
CATCTTCGTCATCAAGCCATGTCTCCCATAGACACCACCGTTTGCCGGGC
CACCCGTTGCACCGATCGTACGCGTACAAGTGGGTTCCTCTAGAATCCCT
TTCGGAGACATCTCACTCGGATAGCCACAGCAGCGGACTAGTTAAGGAAG
AGATCCTCCTTCTTGACGCGCGGGGCTCGCACGACAAGGAAACATTTGCA
CGAGCATGGTGTGCGTCTGTTGGACATCATGCCGTCATTGGCAAGGTTGG
ACGGACCTGTCTGGCATGTTGCATTCGAGAAGCCCGAGCGTTACAGGTGA
AGGTGGTGATTCGCATTGGGGACGGGATGTCGACGCCCTCTTCGTCGATC
CAAGTATTGTATGGTGGAGAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003218-T1.utr5p1 | KJC3_003218-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003218-T1.utr3p1 | KJC3_003218-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1271386..1275263 + |
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