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KJC3_003219-T1, KJC3_003219-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003219-T1
Unique NameKJC3_003219-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1290516..1291737+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003219-T1 ID=KJC3_003219-T1|Name=KJC3_003219-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1222bp|location=Sequence derived from alignment at ch3:1290516..1291737+ (Aspergillus niger KJC3)
ATGCCCGCGGTTGTCGAGGATATCACTCCGATAACAAGATCAGAAGGCAC
AGTCATGGAATCTTCCACTGCGGATAAGAAGCGCAACAAGCTTGGATATC
ATCGCACCTCTGTCGCATGTGGTAAGCTCTCGGTTCTCGGTGGTCTCCGT
TGGAATACTCATTTCTTATGCGACAGTACACTGTCGGCGGCGAAAGATCC
GATGTCTTGTTGCGCCAGACGATGCTCAAGGACGATGCGAGAATTGTATC
CGCCTCCGAAAGGAATGCCAGTTCTTCCCTGTCGACCAGCAGCCCCCGAT
TGAGAAGAAGTCACGTCCCAGTTCTCGTCTAGAAACCGCTTCGACGGACC
CGTCGACCGCTTCTTCGTCGCCACCGAATGTGACTGGGGTAGAGCAAGCG
GAGCCTTTCTTTACTTACCAACCCATGCCGTTGGGTTCGAATCCGGATGT
GGGAGCCTTCAATACTGCGACCTTTCCGAGTAACCCGATGGCACCATTTA
CTCCAGGTTTGTGGCTCTAACGAGCAGGAGGAATGTTGAATCATGAAGTG
TGTTGACCATTGCCTGAAACAGATCGCAGCGTCGGTGCGGACTTTGTAGC
GCCTCCTTCTATGGACCCCGGGGTTCCGTGGGACGAGTATACGACCATCA
CAGACCCTCAAATGTTAGCAGCTATGCCCGCGGGGAAAGCAATGATGAAT
ATGTCTTCGAACGTTTGGGGTGCGACACCCAATCCCATGGCACCGATGCC
AACCACTTCGCCCCTGCCAGGAACGCCCACAGTCCCGTCGCAGTCGCAAG
GTCTGGCACAAACACCCACGTATGCCATGCAGCCTGATGGGACGGTCTGG
CAAGTGCCCCCCCAACGCGCGATGACATTTTCGGCACAACCCGCAGACAT
GGCAATCCCGTATCCGAACCAAGGTCAATTCGTGCAGCCATCGCCTGCAG
ATCTTAAAAGAAGAATGACCAGCCCGGCCCAGTCTTTCCCCGGAACTCCG
ATCAACCCCCAGAGTCCTCCTGCAGCGGATCTACAGGCGGTGTCTGTCTC
ATACCCAGGCCAGCCGGCCGCTATGGGTTTCAACACCTGGCAGGATGTGA
ACAGCATGTCCCCCATGAGTGTGGTCCAGTACCCGATGTACACGAACGAC
CCAGCCCAGCAAGCAGGCTTTGGCAGCCCGCCACCGATGGGCCACCCCGG
TCCAGGCCAATCCCCGCAATAA
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Coding sequence (CDS) from alignment at ch3:1290516..1291737+

>KJC3_003219-T1 ID=KJC3_003219-T1|Name=KJC3_003219-T1|organism=Aspergillus niger KJC3|type=CDS|length=3303bp|location=Sequence derived from alignment at ch3:1290516..1291737+ (Aspergillus niger KJC3)
ATGCCCGCGGTTGTCGAGGATATCACTCCGATAACAAGATCAGAAGGCAC
AGTCATGGAATCTTCCACTGCGGATAAGAAGCGCAACAAGCTTGGATATC
ATCGCACCTCTGTCGCATGTGTACACTGTCGGCGGCGAAAGATCCGATGT
CTTGTTGCGCCAGACGATGCTCAAGGACGATGCGAGAATTGTATCCGCCT
CCGAAAGGAATGCCAGTTCTTCCCTGTCGACCAGCAGCCCCCGATTGAGA
AGAAGTCACGTCCCAGTTCTCGTCTAGAAACCGCTTCGACGGACCCGTCG
ACCGCTTCTTCGTCGCCACCGAATGTGACTGGGGTAGAGCAAGCGGAGCC
TTTCTTTACTTACCAACCCATGCCGTTGGGTTCGAATCCGGATGTGGGAG
CCTTCAATACTGCGACCTTTCCGAGTAACCCGATGGCACCATTTACTCCA
GATCGCAGCGTCGGTGCGGACTTTGTAGCGCCTCCTTCTATGGACCCCGG
GGTTCCGTGGGACGAGTATACGACCATCACAGACCCTCAAATGTTAGCAG
CTATGCCCGCGGGGAAAGCAATGATGAATATGTCTTCGAACGTTTGGGGT
GCGACACCCAATCCCATGGCACCGATGCCAACCACTTCGCCCCTGCCAGG
AACGCCCACAGTCCCGTCGCAGTCGCAAGGTCTGGCACAAACACCCACGT
ATGCCATGCAGCCTGATGGGACGGTCTGGCAAGTGCCCCCCCAACGCGCG
ATGACATTTTCGGCACAACCCGCAGACATGGCAATCCCGTATCCGAACCA
AGGTCAATTCGTGCAGCCATCGCCTGCAGATCTTAAAAGAAGAATGACCA
GCCCGGCCCAGTCTTTCCCCGGAACTCCGATCAACCCCCAGAGTCCTCCT
GCAGCGGATCTACAGGCGGTGTCTGTCTCATACCCAGGCCAGCCGGCCGC
TATGGGTTTCAACACCTGGCAGGATGTGAACAGCATGTCCCCCATGAGTG
TGGTCCAGTACCCGATGTACACGAACGACCCAGCCCAGCAAGCAGGCTTT
GGCAGCCCGCCACCGATGGGCCACCCCGGTCCAGGCCAATCCCCGCAATA
AATGCCCGCGGTTGTCGAGGATATCACTCCGATAACAAGATCAGAAGGCA
CAGTCATGGAATCTTCCACTGCGGATAAGAAGCGCAACAAGCTTGGATAT
CATCGCACCTCTGTCGCATGTGTACACTGTCGGCGGCGAAAGATCCGATG
TCTTGTTGCGCCAGACGATGCTCAAGGACGATGCGAGAATTGTATCCGCC
TCCGAAAGGAATGCCAGTTCTTCCCTGTCGACCAGCAGCCCCCGATTGAG
AAGAAGTCACGTCCCAGTTCTCGTCTAGAAACCGCTTCGACGGACCCGTC
GACCGCTTCTTCGTCGCCACCGAATGTGACTGGGGTAGAGCAAGCGGAGC
CTTTCTTTACTTACCAACCCATGCCGTTGGGTTCGAATCCGGATGTGGGA
GCCTTCAATACTGCGACCTTTCCGAGTAACCCGATGGCACCATTTACTCC
AGATCGCAGCGTCGGTGCGGACTTTGTAGCGCCTCCTTCTATGGACCCCG
GGGTTCCGTGGGACGAGTATACGACCATCACAGACCCTCAAATGTTAGCA
GCTATGCCCGCGGGGAAAGCAATGATGAATATGTCTTCGAACGTTTGGGG
TGCGACACCCAATCCCATGGCACCGATGCCAACCACTTCGCCCCTGCCAG
GAACGCCCACAGTCCCGTCGCAGTCGCAAGGTCTGGCACAAACACCCACG
TATGCCATGCAGCCTGATGGGACGGTCTGGCAAGTGCCCCCCCAACGCGC
GATGACATTTTCGGCACAACCCGCAGACATGGCAATCCCGTATCCGAACC
AAGGTCAATTCGTGCAGCCATCGCCTGCAGATCTTAAAAGAAGAATGACC
AGCCCGGCCCAGTCTTTCCCCGGAACTCCGATCAACCCCCAGAGTCCTCC
TGCAGCGGATCTACAGGCGGTGTCTGTCTCATACCCAGGCCAGCCGGCCG
CTATGGGTTTCAACACCTGGCAGGATGTGAACAGCATGTCCCCCATGAGT
GTGGTCCAGTACCCGATGTACACGAACGACCCAGCCCAGCAAGCAGGCTT
TGGCAGCCCGCCACCGATGGGCCACCCCGGTCCAGGCCAATCCCCGCAAT
AAATGCCCGCGGTTGTCGAGGATATCACTCCGATAACAAGATCAGAAGGC
ACAGTCATGGAATCTTCCACTGCGGATAAGAAGCGCAACAAGCTTGGATA
TCATCGCACCTCTGTCGCATGTGTACACTGTCGGCGGCGAAAGATCCGAT
GTCTTGTTGCGCCAGACGATGCTCAAGGACGATGCGAGAATTGTATCCGC
CTCCGAAAGGAATGCCAGTTCTTCCCTGTCGACCAGCAGCCCCCGATTGA
GAAGAAGTCACGTCCCAGTTCTCGTCTAGAAACCGCTTCGACGGACCCGT
CGACCGCTTCTTCGTCGCCACCGAATGTGACTGGGGTAGAGCAAGCGGAG
CCTTTCTTTACTTACCAACCCATGCCGTTGGGTTCGAATCCGGATGTGGG
AGCCTTCAATACTGCGACCTTTCCGAGTAACCCGATGGCACCATTTACTC
CAGATCGCAGCGTCGGTGCGGACTTTGTAGCGCCTCCTTCTATGGACCCC
GGGGTTCCGTGGGACGAGTATACGACCATCACAGACCCTCAAATGTTAGC
AGCTATGCCCGCGGGGAAAGCAATGATGAATATGTCTTCGAACGTTTGGG
GTGCGACACCCAATCCCATGGCACCGATGCCAACCACTTCGCCCCTGCCA
GGAACGCCCACAGTCCCGTCGCAGTCGCAAGGTCTGGCACAAACACCCAC
GTATGCCATGCAGCCTGATGGGACGGTCTGGCAAGTGCCCCCCCAACGCG
CGATGACATTTTCGGCACAACCCGCAGACATGGCAATCCCGTATCCGAAC
CAAGGTCAATTCGTGCAGCCATCGCCTGCAGATCTTAAAAGAAGAATGAC
CAGCCCGGCCCAGTCTTTCCCCGGAACTCCGATCAACCCCCAGAGTCCTC
CTGCAGCGGATCTACAGGCGGTGTCTGTCTCATACCCAGGCCAGCCGGCC
GCTATGGGTTTCAACACCTGGCAGGATGTGAACAGCATGTCCCCCATGAG
TGTGGTCCAGTACCCGATGTACACGAACGACCCAGCCCAGCAAGCAGGCT
TTGGCAGCCCGCCACCGATGGGCCACCCCGGTCCAGGCCAATCCCCGCAA
TAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003219KJC3_003219Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003219-T1.exon1KJC3_003219-T1.exon1Aspergillus niger KJC3exon
KJC3_003219-T1.exon2KJC3_003219-T1.exon2Aspergillus niger KJC3exon
KJC3_003219-T1.exon3KJC3_003219-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003219-T1.cdsKJC3_003219-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003219-T1KJC3_003219-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1290516..1291737 +
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