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KJC3_003220-T1, KJC3_003220-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003220-T1
Unique NameKJC3_003220-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1301054..1304961+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003220-T1 ID=KJC3_003220-T1|Name=KJC3_003220-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3908bp|location=Sequence derived from alignment at ch3:1301054..1304961+ (Aspergillus niger KJC3)
TCTTTTCTTTTCTTCTTCCCTCCCCAAACTTTGGGGGACCGAACCCCTCC
CACATACACACCCTCTTGTCTCGCCGCGATCCTCCGAGACAGACAGACAG
ACAGAACACAGACAGACAGACCCTCAGTCCGTCTATCCATTTGGAGATAT
CCGATAGATTATTATTGCCCAGGGTTTGGCTGAATCTGGTCGTTTACGGC
GGGTAGCCTGGAATTCCTCGTGCTGCGACCACCGGCCAATCGAGCGCGGC
GGCCTTAATTGGTGCTGGACTCTCTCTCTCTCTCTCTTCGCTTTCCTTCG
CTCTTCCTTTTCCGCCCTTTAATCCGGCCTCCTCTTCTTCCCTCCCTCGC
CGCTTATCTTTCGCCGTCGACTCTCTGGTCGTTCGTCCTCCTTCGCCTTT
CCCCAGTTTCCCCTCCCTCCCTGCCTATCTCTGGTCCTGCACCTCCCTTA
TCTTTTCCCTTTTTTTTGATCGCATTTCTTTTCTTTTTTTTTTCACCTCA
ATTAATTTATTCTCTTTTGGGGGGTTGGTCGACTCTTTCTCTGTCTGCCC
GTTACCTTTTTTCTTTTCTCCGCCCTTCTATTTCGTGTGCCCCCTTGAGG
GCTTCCTCCAATCAGACCAACCATGTCCGGGTTGACCCTGGGGGGAGGAG
GCAGTGGTGGTGTGCGACCGACGCAACCCGCGGCCTTTGCTTCTCTCCAG
GATTCCGCCGACGCCGACCGCCGCTCCTCCACCACCACCTCCAACAACCC
CCTCCACTTCCCTCCGACTTCCTCTCAACTCTCCGACGATTTCTCCTTTG
GCTCCCCAATCAGCCCCGCCGATTCCTCGAATGCTCCCGACAGTCTGCTT
CACGATTCCCTTTTTCCGGAATGGAAGGTCGGTACGCCTCGAGCCGGGTT
TGATGGGCCCGATGAGATGCAGCGAAAGGACCCTTTAGCGACCCAGATAT
GGAAGCTGTATTCTAGGACCAAGGCTCAGTTACCCAACCAAGAGCGCATG
GAGAACCTGACGTGGCGGATGATGGCAATGAGCTTGAAACGCAAGGAACG
GGAACGTGCTCAGCAATCTCGGTAGGTGGAGTGCCTCGTCAACCCTCTCT
GTTCCTCTCCCTCACCCCCTGCCGTCGCTCGATGGAATGCTGATCGAACC
TCGTGCGTCAATAGTAGTGCCTCCGCTAGAAACAGCGTTTCCGGCCCCAG
TGGCATTGCTCAACTACGTCTCACTGATCGCGAGCCGACCGCGGCAAATC
CGTCTCTCTCCACCGACCTGACCTCTGATCCTATGAACCTCGACGATTTC
ATTGTTCCCTTCGAATCTCCGTCCGATCACCCATCTCCTCAACTCACGAA
AGGCGAGGCGACGTCGGCAGCCATCCCGATCAAGTCCCGCAAGGACCAGG
TGGCTGAGTCCACACCCGTGCCCGCATCGTTCCCCCACCCACCCCAGGAC
CAGCGAAAGAACAGTGAGTTTGGCTACGTGCCCCGTCGGGTGCGCAAGAC
GAGCATCGACGACCGCCAGTTCTTCAACCTCCAGGTGCCCACCCGGAAAC
GCCCGGCCGAGGCGTCGCCCCAGGTGCCGCCCGTGTCGAACGCCATGTTG
GCTCAGGATCCGGACTTGTCGGGCGGTGTGCCGGACTACGCCCTGGATGC
GTCGTCGGCCTTTGCGTTGCATCATAATAACCATTCTTCGTCCCACCACA
ACCACACTTCGCCGGGCATGCCGTTTGGTCTGGATACCTACGGCCTGGGT
GAAGATCCGATCCTTACTTCCGCCGGTCCCTACCAGACCCAGTTTACTTT
CTCTCCCACTGAGTCCCCCATGACGTCAGGCAACCCCTTTGCCAACCTGT
ATGCGCACACGCCGGTGGCCTCGTCCCTCAACTCGACCGATTTCTTCTCC
CCGCCGCAGTCGGGATACCAGTCGACAGCCTCGACGCCGCAGCCCGCGTA
TGACGGTGAGCATTCGATGTTCTTCGATATGCCGTCGGTGGATGCGCGCA
CGCAGCGCCGGGTTCCCAACTACGTCTCGCACCGCACGTCGAACCTGTCT
GCTTCGCTGCAACCGCGATATATGTTCAACCAGAACCAAGATCAGTCGCA
CCACACCGGCAACCATTCGTCGTCGATGCACTCGCCGGGCTATCCCATCC
CTCAGCCCCAGCACGTTGATCCCACCCAGGTGCTCAACCCCAACGATTTC
TCGACCGGGGCTTCTCATGCGGCCATGTTCAGCTTTGGCGCTGATTCGGA
TAACGAGGACGACGACGGTAACCAGTTCTCCGACCGTGCGGGATTGACGA
TGCCTGGCGATCTGGATGATGGTGCGGATATGAACGGTGGCATGCAGTGG
GATGCTCAGTTCCCTGGGTCCTTCCACTCGCTGCCAGGATTCACCGCACA
GCACCGTAAGCATGTGACGATCGGGTCCGCCGACATGATGGACACCCCCA
GCGAATGGGCTCAAAGCGGCAGTCTGGGACGCACGCATGGATCGGCCGCC
TCGGTCAGCGAGGTGCGCAACCGCGAGCAAGATCCCCGGCGGCAGAAGAT
TGCGCGTACGACGTCGACGCCTAATACGGCACAGCTGCTGCGGCAGAGCA
TGAACGCCAACACTTCACACACGTCACCCAACACACCGCCAGAGTCGGGC
TTGAGCAGTGCCGTGCCATCTCGGCCGGCCAGTCCGGGTGGCTCGAAGAA
CGGTGAGCAGAGCAGTGGCCCGACCACATGTACCAACTGCTTCACGCAGA
CCACCCCGTTGTGGCGGCGTAATCCTGAGGGCCAGCCGCTGTGTAACGCC
TGCGGGCTGTTCCTGAAGCTGCACGGGGTGGTGCGGCCACTGTCGCTCAA
GACGGACGTGATCAAGAAGCGCAACCGCAGCAGCGCCAACAGCCTGGCGG
TGGGCACTTCGCGCGCGTCGAAGAAGTCGGCACGCAAGAACTCGGTGCAG
CAGACGACGGTCACCACGCCGACGTCGAGCCGGGCGCAGAGTGGTGCGAC
GTCGTCGGAGTCGCCGCCCGCGGTGCCGGGTGGCAGTTCGTCGGGCAGAG
CCGCAGGCGTGGTCCCCATCGCGGCGGCGCCTCCAAAGGCGAACCCGACG
ACGAGTTCTCCAGGACAGAGTCGGGGAACCTCGTCCGTGCAGATGGCGCC
GAAGCGTCAGCGTCGGCTGGAAAAGGCCACGGACGCGGAGGCAGGCGGCG
ACGAAGCCAGCAAATCGAGCACGGCGAGCGGAGGACGGTCCAAGGTGGTG
CCTCTGGCGCCGGCAATGCCCCCGGCGGCAGCCAATCCGGCCAACCACAG
CATTGCAGGCGGGCAAGGAGCCAGCCAAGAGTGGGAATGGCTGACTATGA
GTCTGTAAACTTTGTGCAGATGAGTCTGTAAAAGTTTTCTGCGGACAAGT
TTCACGGGATGAATCTTTTCTTGTTTCTGATGTTCCACGATAGACATGAC
CGCGCAGCAAGGAGTTCTCGCTAGACGAGCAGGAGTTGGTAATATGCAAG
GGTAATGGTCTGCGCTGGCTGGCGGCAGGTCTAATGAGTGATGCGATTTC
GGTTCTTGGGGATGCTTAGGATGCTTAGTACATGTCTAATGAAGGGGATG
GACGAGCGGGAGGATTTTATTGTGTGTTTTTGCTTGATACAATCGCGTCT
GTCCGGTCCATTCTGCTGTTGCTGCTGTTGCTGCTGCTTGCTTTTCTACT
TGTGATGATTTTGTGATTTTGTTATGTTTGTTTGTTCAGAACTCGGACCG
GGCAGAAGTGCGCATCTCCTTGTTTAGAGTGATTTAATCTTTTCTGATTT
TATCTTTGCTTTCCGCTTGATTGTGATTGTGATTGTGATTGATTGTGATT
ATGAATAGTTAGGTAGTCTAAAGATGGGTTCAATTTGAACGACATGTCTT
CTTTCATT
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Coding sequence (CDS) from alignment at ch3:1301054..1304961+

>KJC3_003220-T1 ID=KJC3_003220-T1|Name=KJC3_003220-T1|organism=Aspergillus niger KJC3|type=CDS|length=5280bp|location=Sequence derived from alignment at ch3:1301054..1304961+ (Aspergillus niger KJC3)
ATGTCCGGGTTGACCCTGGGGGGAGGAGGCAGTGGTGGTGTGCGACCGAC
GCAACCCGCGGCCTTTGCTTCTCTCCAGGATTCCGCCGACGCCGACCGCC
GCTCCTCCACCACCACCTCCAACAACCCCCTCCACTTCCCTCCGACTTCC
TCTCAACTCTCCGACGATTTCTCCTTTGGCTCCCCAATCAGCCCCGCCGA
TTCCTCGAATGCTCCCGACAGTCTGCTTCACGATTCCCTTTTTCCGGAAT
GGAAGGTCGGTACGCCTCGAGCCGGGTTTGATGGGCCCGATGAGATGCAG
CGAAAGGACCCTTTAGCGACCCAGATATGGAAGCTGTATTCTAGGACCAA
GGCTCAGTTACCCAACCAAGAGCGCATGGAGAACCTGACGTGGCGGATGA
TGGCAATGAGCTTGAAACGCAAGGAACGGGAACGTGCTCAGCAATCTCGT
GCCTCCGCTAGAAACAGCGTTTCCGGCCCCAGTGGCATTGCTCAACTACG
TCTCACTGATCGCGAGCCGACCGCGGCAAATCCGTCTCTCTCCACCGACC
TGACCTCTGATCCTATGAACCTCGACGATTTCATTGTTCCCTTCGAATCT
CCGTCCGATCACCCATCTCCTCAACTCACGAAAGGCGAGGCGACGTCGGC
AGCCATCCCGATCAAGTCCCGCAAGGACCAGGTGGCTGAGTCCACACCCG
TGCCCGCATCGTTCCCCCACCCACCCCAGGACCAGCGAAAGAACAGTGAG
TTTGGCTACGTGCCCCGTCGGGTGCGCAAGACGAGCATCGACGACCGCCA
GTTCTTCAACCTCCAGGTGCCCACCCGGAAACGCCCGGCCGAGGCGTCGC
CCCAGGTGCCGCCCGTGTCGAACGCCATGTTGGCTCAGGATCCGGACTTG
TCGGGCGGTGTGCCGGACTACGCCCTGGATGCGTCGTCGGCCTTTGCGTT
GCATCATAATAACCATTCTTCGTCCCACCACAACCACACTTCGCCGGGCA
TGCCGTTTGGTCTGGATACCTACGGCCTGGGTGAAGATCCGATCCTTACT
TCCGCCGGTCCCTACCAGACCCAGTTTACTTTCTCTCCCACTGAGTCCCC
CATGACGTCAGGCAACCCCTTTGCCAACCTGTATGCGCACACGCCGGTGG
CCTCGTCCCTCAACTCGACCGATTTCTTCTCCCCGCCGCAGTCGGGATAC
CAGTCGACAGCCTCGACGCCGCAGCCCGCGTATGACGGTGAGCATTCGAT
GTTCTTCGATATGCCGTCGGTGGATGCGCGCACGCAGCGCCGGGTTCCCA
ACTACGTCTCGCACCGCACGTCGAACCTGTCTGCTTCGCTGCAACCGCGA
TATATGTTCAACCAGAACCAAGATCAGTCGCACCACACCGGCAACCATTC
GTCGTCGATGCACTCGCCGGGCTATCCCATCCCTCAGCCCCAGCACGTTG
ATCCCACCCAGGTGCTCAACCCCAACGATTTCTCGACCGGGGCTTCTCAT
GCGGCCATGTTCAGCTTTGGCGCTGATTCGGATAACGAGGACGACGACGG
TAACCAGTTCTCCGACCGTGCGGGATTGACGATGCCTGGCGATCTGGATG
ATGGTGCGGATATGAACGGTGGCATGCAGTGGGATGCTCAGTTCCCTGGG
TCCTTCCACTCGCTGCCAGGATTCACCGCACAGCACCGTAAGCATGTGAC
GATCGGGTCCGCCGACATGATGGACACCCCCAGCGAATGGGCTCAAAGCG
GCAGTCTGGGACGCACGCATGGATCGGCCGCCTCGGTCAGCGAGGTGCGC
AACCGCGAGCAAGATCCCCGGCGGCAGAAGATTGCGCGTACGACGTCGAC
GCCTAATACGGCACAGCTGCTGCGGCAGAGCATGAACGCCAACACTTCAC
ACACGTCACCCAACACACCGCCAGAGTCGGGCTTGAGCAGTGCCGTGCCA
TCTCGGCCGGCCAGTCCGGGTGGCTCGAAGAACGGTGAGCAGAGCAGTGG
CCCGACCACATGTACCAACTGCTTCACGCAGACCACCCCGTTGTGGCGGC
GTAATCCTGAGGGCCAGCCGCTGTGTAACGCCTGCGGGCTGTTCCTGAAG
CTGCACGGGGTGGTGCGGCCACTGTCGCTCAAGACGGACGTGATCAAGAA
GCGCAACCGCAGCAGCGCCAACAGCCTGGCGGTGGGCACTTCGCGCGCGT
CGAAGAAGTCGGCACGCAAGAACTCGGTGCAGCAGACGACGGTCACCACG
CCGACGTCGAGCCGGGCGCAGAGTGGTGCGACGTCGTCGGAGTCGCCGCC
CGCGGTGCCGGGTGGCAGTTCGTCGGGCAGAGCCGCAGGCGTGGTCCCCA
TCGCGGCGGCGCCTCCAAAGGCGAACCCGACGACGAGTTCTCCAGGACAG
AGTCGGGGAACCTCGTCCGTGCAGATGGCGCCGAAGCGTCAGCGTCGGCT
GGAAAAGGCCACGGACGCGGAGGCAGGCGGCGACGAAGCCAGCAAATCGA
GCACGGCGAGCGGAGGACGGTCCAAGGTGGTGCCTCTGGCGCCGGCAATG
CCCCCGGCGGCAGCCAATCCGGCCAACCACAGCATTGCAGGCGGGCAAGG
AGCCAGCCAAGAGTGGGAATGGCTGACTATGAGTCTGTAAATGTCCGGGT
TGACCCTGGGGGGAGGAGGCAGTGGTGGTGTGCGACCGACGCAACCCGCG
GCCTTTGCTTCTCTCCAGGATTCCGCCGACGCCGACCGCCGCTCCTCCAC
CACCACCTCCAACAACCCCCTCCACTTCCCTCCGACTTCCTCTCAACTCT
CCGACGATTTCTCCTTTGGCTCCCCAATCAGCCCCGCCGATTCCTCGAAT
GCTCCCGACAGTCTGCTTCACGATTCCCTTTTTCCGGAATGGAAGGTCGG
TACGCCTCGAGCCGGGTTTGATGGGCCCGATGAGATGCAGCGAAAGGACC
CTTTAGCGACCCAGATATGGAAGCTGTATTCTAGGACCAAGGCTCAGTTA
CCCAACCAAGAGCGCATGGAGAACCTGACGTGGCGGATGATGGCAATGAG
CTTGAAACGCAAGGAACGGGAACGTGCTCAGCAATCTCGTGCCTCCGCTA
GAAACAGCGTTTCCGGCCCCAGTGGCATTGCTCAACTACGTCTCACTGAT
CGCGAGCCGACCGCGGCAAATCCGTCTCTCTCCACCGACCTGACCTCTGA
TCCTATGAACCTCGACGATTTCATTGTTCCCTTCGAATCTCCGTCCGATC
ACCCATCTCCTCAACTCACGAAAGGCGAGGCGACGTCGGCAGCCATCCCG
ATCAAGTCCCGCAAGGACCAGGTGGCTGAGTCCACACCCGTGCCCGCATC
GTTCCCCCACCCACCCCAGGACCAGCGAAAGAACAGTGAGTTTGGCTACG
TGCCCCGTCGGGTGCGCAAGACGAGCATCGACGACCGCCAGTTCTTCAAC
CTCCAGGTGCCCACCCGGAAACGCCCGGCCGAGGCGTCGCCCCAGGTGCC
GCCCGTGTCGAACGCCATGTTGGCTCAGGATCCGGACTTGTCGGGCGGTG
TGCCGGACTACGCCCTGGATGCGTCGTCGGCCTTTGCGTTGCATCATAAT
AACCATTCTTCGTCCCACCACAACCACACTTCGCCGGGCATGCCGTTTGG
TCTGGATACCTACGGCCTGGGTGAAGATCCGATCCTTACTTCCGCCGGTC
CCTACCAGACCCAGTTTACTTTCTCTCCCACTGAGTCCCCCATGACGTCA
GGCAACCCCTTTGCCAACCTGTATGCGCACACGCCGGTGGCCTCGTCCCT
CAACTCGACCGATTTCTTCTCCCCGCCGCAGTCGGGATACCAGTCGACAG
CCTCGACGCCGCAGCCCGCGTATGACGGTGAGCATTCGATGTTCTTCGAT
ATGCCGTCGGTGGATGCGCGCACGCAGCGCCGGGTTCCCAACTACGTCTC
GCACCGCACGTCGAACCTGTCTGCTTCGCTGCAACCGCGATATATGTTCA
ACCAGAACCAAGATCAGTCGCACCACACCGGCAACCATTCGTCGTCGATG
CACTCGCCGGGCTATCCCATCCCTCAGCCCCAGCACGTTGATCCCACCCA
GGTGCTCAACCCCAACGATTTCTCGACCGGGGCTTCTCATGCGGCCATGT
TCAGCTTTGGCGCTGATTCGGATAACGAGGACGACGACGGTAACCAGTTC
TCCGACCGTGCGGGATTGACGATGCCTGGCGATCTGGATGATGGTGCGGA
TATGAACGGTGGCATGCAGTGGGATGCTCAGTTCCCTGGGTCCTTCCACT
CGCTGCCAGGATTCACCGCACAGCACCGTAAGCATGTGACGATCGGGTCC
GCCGACATGATGGACACCCCCAGCGAATGGGCTCAAAGCGGCAGTCTGGG
ACGCACGCATGGATCGGCCGCCTCGGTCAGCGAGGTGCGCAACCGCGAGC
AAGATCCCCGGCGGCAGAAGATTGCGCGTACGACGTCGACGCCTAATACG
GCACAGCTGCTGCGGCAGAGCATGAACGCCAACACTTCACACACGTCACC
CAACACACCGCCAGAGTCGGGCTTGAGCAGTGCCGTGCCATCTCGGCCGG
CCAGTCCGGGTGGCTCGAAGAACGGTGAGCAGAGCAGTGGCCCGACCACA
TGTACCAACTGCTTCACGCAGACCACCCCGTTGTGGCGGCGTAATCCTGA
GGGCCAGCCGCTGTGTAACGCCTGCGGGCTGTTCCTGAAGCTGCACGGGG
TGGTGCGGCCACTGTCGCTCAAGACGGACGTGATCAAGAAGCGCAACCGC
AGCAGCGCCAACAGCCTGGCGGTGGGCACTTCGCGCGCGTCGAAGAAGTC
GGCACGCAAGAACTCGGTGCAGCAGACGACGGTCACCACGCCGACGTCGA
GCCGGGCGCAGAGTGGTGCGACGTCGTCGGAGTCGCCGCCCGCGGTGCCG
GGTGGCAGTTCGTCGGGCAGAGCCGCAGGCGTGGTCCCCATCGCGGCGGC
GCCTCCAAAGGCGAACCCGACGACGAGTTCTCCAGGACAGAGTCGGGGAA
CCTCGTCCGTGCAGATGGCGCCGAAGCGTCAGCGTCGGCTGGAAAAGGCC
ACGGACGCGGAGGCAGGCGGCGACGAAGCCAGCAAATCGAGCACGGCGAG
CGGAGGACGGTCCAAGGTGGTGCCTCTGGCGCCGGCAATGCCCCCGGCGG
CAGCCAATCCGGCCAACCACAGCATTGCAGGCGGGCAAGGAGCCAGCCAA
GAGTGGGAATGGCTGACTATGAGTCTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0042128nitrate assimilation
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0043565sequence-specific DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003220KJC3_003220Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003220-T1.utr5p1KJC3_003220-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003220-T1.exon1KJC3_003220-T1.exon1Aspergillus niger KJC3exon
KJC3_003220-T1.exon2KJC3_003220-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003220-T1.cdsKJC3_003220-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003220-T1.utr3p1KJC3_003220-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003220-T1KJC3_003220-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011420
DBxrefInterPro:IPR013088
DBxrefInterPro:IPR013860
DBxrefInterPro:IPR000679
DBxrefPFAM:PF00320
DBxrefPFAM:PF08550
DBxrefPFAM:PF07573
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1301054..1304961 +
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