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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1306881..1309081- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003222-T1 ID=KJC3_003222-T1|Name=KJC3_003222-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2201bp|location=Sequence derived from alignment at ch3:1306881..1309081- (Aspergillus niger KJC3)
ATGGCTAATAAAAACGTGCCTGGTAGCTCTGTTTGCATACCGCAGCGAGC
CAATCTGACATTTCATGCACGCTTGAACCACGGTTCGATCGCAGAAGCTG
TCGGATTGAGCCAGTGCTTGACGTCAGATTCGAGGCCTCATACTTTGCGC
GATACTATAACCACTTATCTGGCGCAAATGGCATCCCCTGGAGCACCCCG
CTATCCGACTCTTATCGAAGCTGGGCAGATAGTCTGTTCGGCGACGCATC
CAATTATAGGGTGGTAGCTATCGCCAGCAGGGATGCTTATCATGCATGCA
TCGGCTTATCTGGCTGGAACAAATGGGCTGCAGATCGTGATTGTCGGGCT
GCAGCTTTCTTTCTCTAGCATTTAGACAGCGCAGCTTGTGCGACCGCTCC
CTTACATTCGATCTACCATATTGCTTTTTCGCTCCCGCTCTCCTATCGGA
TGACTTCAACCTCATCGACTCCATCTACCGCATCCCGGCGGCAACACATC
TGATCATGAAGTTCAAACGGCCTCATCTTCGAGTGCCGCAGTCGCGCTCT
GCTTTTGCGGATGGAAGCGCTCGCTGGACAAATCTCGATCTCGATCCGGT
TCCTCTCCATCGTCGACAATGGGGACCGCTCAGCTTCATCTGTACGACCC
CCCCTTTTTTTTTCTTTGTTACTCTTGCTATGCTGATGGATGTACAGCGT
ATTGGATTTCCGATGCATTTAATGCAGCTACATGGCAGTTTGCTAGCAGT
ATAATAGCAGTCGGACTTAGCTGGCGCGAATCCCTCATAATCGTCGCTAT
TTCGTTCTTCATCATGTCTTTCGTCATTGCGGGCAACGGCGCTGTCGGCG
CGATCTATCACATTCCGTTCCCGGTGATCTCACGGGCTAGCTGGGGATTC
TGGGGATCATACGTTGCCATCGTCTCTCGCGTCATCTTGGCGCTGTTCTG
GTTCGCAATTCAGAACGTCAACGGCGGAAACGCCGTGCGTGCCATGATCG
GGGCCATCTGGCCCAGCTTCTTGAGGGTGAAGAACGAGATCCCTGAGGAT
CAGGGCATTACAACAAATGGCATGGTCGGATACTTTATCTTCTGGCTGTT
TCAACTGCCGTTTCTCTGCATCCACCCGAACAAAGTGCGGTGGCTGTTCG
TGGTGAAGTCTGTGCTTGTGCCGATCGCGTGGATTGCGATTCTGATCTGG
GCATTTGTGGCAGAGGGAGGAGGTAAAATGTTCGAGCAGAAAGCGACAGT
CTCGGGGTCACAGTACAGCTGGGTGTTCCTGGCGAGTATGACATCGGTTC
TGGGGAACTATGCCACCCTCAGTGTCAACCAGGTATGTAGGCTAATGGAA
GGCGATGCAATGACTAACAATCGTAGTCCGACTTTTCTCGATACTCGCGT
GTTACGGCAAAGTGGCAGCTCCTATACGTCCCTATGCTGCCTATCGTGTT
TACTTTTATCTCGTTCATCGGCATTGCCGCCTCCTCAGCCGGCTACGCCA
GATATGGTGGATCAATTCCATGGGATCCGATCGAACTAATCAGCCACTGG
TCCAGCCGGGCATGTCGGTTTTTCGCCGCATTTTCATTCGCTCTGGCTTC
CCTCGGCGTCAACATATCCGCCAATTCGATATCCGCAGCAAACGATCTGA
TGGCCCTGTTTCCGGGACATGTCAATCTGCGCCGAGGCCAGATCATCTGC
GGCATTTTGTCTTGGGCACTGGTGCCATGGAAGATTCTTGAGTCCGCGGA
CAGCTTTCTGAACTTCATGTCTGCGTATGCCATCTTCCTGGGACCGATTG
CAGCCATCATGCTGTGGGACTTTTGGCTGTTGAAGCACGGAAAGTACGAC
ACCCTGGCTCTGTACCAGCCGAACAACCCGGTGTATCGATACTCGAAATG
GGGAGTGAACTGGCGCGCCATCGTGGCATTCATCGTCGGCGTGGTGCCGA
GTCTGCCAGGACTGATCAACTCGGTCAACAGCAGTATTTCGGTGGGAGTG
GGGCTCCACCCGTACCAGTTCGGATGGCTGCTAGGGTTCGTAGGGACCAG
CGTGGTATATGTAGGGTTATCGTGGTTGTTTCCTGCCCAGCATGCCATCA
TTGAGAGGGCTGTGATGGCAGAAGAGATCTACGACGGACGGGAAGTTGAC
GCAGGATCCGAGGAACAGTTGGACAACATGCAAGAGAAGGCCAAAGTATA
A back to topCoding sequence (CDS) from alignment at ch3:1306881..1309081- >KJC3_003222-T1 ID=KJC3_003222-T1|Name=KJC3_003222-T1|organism=Aspergillus niger KJC3|type=CDS|length=7812bp|location=Sequence derived from alignment at ch3:1306881..1309081- (Aspergillus niger KJC3)
TCCGACTTTTCTCGATACTCGCGTGTTACGGCAAAGTGGCAGCTCCTATA
CGTCCCTATGCTGCCTATCGTGTTTACTTTTATCTCGTTCATCGGCATTG
CCGCCTCCTCAGCCGGCTACGCCAGATATGGTGGATCAATTCCATGGGAT
CCGATCGAACTAATCAGCCACTGGTCCAGCCGGGCATGTCGGTTTTTCGC
CGCATTTTCATTCGCTCTGGCTTCCCTCGGCGTCAACATATCCGCCAATT
CGATATCCGCAGCAAACGATCTGATGGCCCTGTTTCCGGGACATGTCAAT
CTGCGCCGAGGCCAGATCATCTGCGGCATTTTGTCTTGGGCACTGGTGCC
ATGGAAGATTCTTGAGTCCGCGGACAGCTTTCTGAACTTCATGTCTGCGT
ATGCCATCTTCCTGGGACCGATTGCAGCCATCATGCTGTGGGACTTTTGG
CTGTTGAAGCACGGAAAGTACGACACCCTGGCTCTGTACCAGCCGAACAA
CCCGGTGTATCGATACTCGAAATGGGGAGTGAACTGGCGCGCCATCGTGG
CATTCATCGTCGGCGTGGTGCCGAGTCTGCCAGGACTGATCAACTCGGTC
AACAGCAGTATTTCGGTGGGAGTGGGGCTCCACCCGTACCAGTTCGGATG
GCTGCTAGGGTTCGTAGGGACCAGCGTGGTATATGTAGGGTTATCGTGGT
TGTTTCCTGCCCAGCATGCCATCATTGAGAGGGCTGTGATGGCAGAAGAG
ATCTACGACGGACGGGAAGTTGACGCAGGATCCGAGGAACAGTTGGACAA
CATGCAAGAGAAGGCCAAAGTATAACGTATTGGATTTCCGATGCATTTAA
TGCAGCTACATGGCAGTTTGCTAGCAGTATAATAGCAGTCGGACTTAGCT
GGCGCGAATCCCTCATAATCGTCGCTATTTCGTTCTTCATCATGTCTTTC
GTCATTGCGGGCAACGGCGCTGTCGGCGCGATCTATCACATTCCGTTCCC
GGTGATCTCACGGGCTAGCTGGGGATTCTGGGGATCATACGTTGCCATCG
TCTCTCGCGTCATCTTGGCGCTGTTCTGGTTCGCAATTCAGAACGTCAAC
GGCGGAAACGCCGTGCGTGCCATGATCGGGGCCATCTGGCCCAGCTTCTT
GAGGGTGAAGAACGAGATCCCTGAGGATCAGGGCATTACAACAAATGGCA
TGGTCGGATACTTTATCTTCTGGCTGTTTCAACTGCCGTTTCTCTGCATC
CACCCGAACAAAGTGCGGTGGCTGTTCGTGGTGAAGTCTGTGCTTGTGCC
GATCGCGTGGATTGCGATTCTGATCTGGGCATTTGTGGCAGAGGGAGGAG
GTAAAATGTTCGAGCAGAAAGCGACAGTCTCGGGGTCACAGTACAGCTGG
GTGTTCCTGGCGAGTATGACATCGGTTCTGGGGAACTATGCCACCCTCAG
TGTCAACCAGCGCAGCTTGTGCGACCGCTCCCTTACATTCGATCTACCAT
ATTGCTTTTTCGCTCCCGCTCTCCTATCGGATGACTTCAACCTCATCGAC
TCCATCTACCGCATCCCGGCGGCAACACATCTGATCATGAAGTTCAAACG
GCCTCATCTTCGAGTGCCGCAGTCGCGCTCTGCTTTTGCGGATGGAAGCG
CTCGCTGGACAAATCTCGATCTCGATCCGGTTCCTCTCCATCGTCGACAA
TGGGGACCGCTCAGCTTCATCTATGGCTAATAAAAACGTGCCTGGTAGCT
CTGTTTGCATACCGCAGCGAGCCAATCTGACATTTCATGCACGCTTGAAC
CACGGTTCGATCGCAGAAGCTGTCGGATTGAGCCAGTGCTTGACGTCAGA
TTCGAGGCCTCATACTTTGCGCGATACTATAACCACTTATCTGGCGCAAA
TGGCATCCCCTGGAGCACCCCGCTATCCGACTCTTATCGAAGCTGGGCAG
ATATCCGACTTTTCTCGATACTCGCGTGTTACGGCAAAGTGGCAGCTCCT
ATACGTCCCTATGCTGCCTATCGTGTTTACTTTTATCTCGTTCATCGGCA
TTGCCGCCTCCTCAGCCGGCTACGCCAGATATGGTGGATCAATTCCATGG
GATCCGATCGAACTAATCAGCCACTGGTCCAGCCGGGCATGTCGGTTTTT
CGCCGCATTTTCATTCGCTCTGGCTTCCCTCGGCGTCAACATATCCGCCA
ATTCGATATCCGCAGCAAACGATCTGATGGCCCTGTTTCCGGGACATGTC
AATCTGCGCCGAGGCCAGATCATCTGCGGCATTTTGTCTTGGGCACTGGT
GCCATGGAAGATTCTTGAGTCCGCGGACAGCTTTCTGAACTTCATGTCTG
CGTATGCCATCTTCCTGGGACCGATTGCAGCCATCATGCTGTGGGACTTT
TGGCTGTTGAAGCACGGAAAGTACGACACCCTGGCTCTGTACCAGCCGAA
CAACCCGGTGTATCGATACTCGAAATGGGGAGTGAACTGGCGCGCCATCG
TGGCATTCATCGTCGGCGTGGTGCCGAGTCTGCCAGGACTGATCAACTCG
GTCAACAGCAGTATTTCGGTGGGAGTGGGGCTCCACCCGTACCAGTTCGG
ATGGCTGCTAGGGTTCGTAGGGACCAGCGTGGTATATGTAGGGTTATCGT
GGTTGTTTCCTGCCCAGCATGCCATCATTGAGAGGGCTGTGATGGCAGAA
GAGATCTACGACGGACGGGAAGTTGACGCAGGATCCGAGGAACAGTTGGA
CAACATGCAAGAGAAGGCCAAAGTATAACGTATTGGATTTCCGATGCATT
TAATGCAGCTACATGGCAGTTTGCTAGCAGTATAATAGCAGTCGGACTTA
GCTGGCGCGAATCCCTCATAATCGTCGCTATTTCGTTCTTCATCATGTCT
TTCGTCATTGCGGGCAACGGCGCTGTCGGCGCGATCTATCACATTCCGTT
CCCGGTGATCTCACGGGCTAGCTGGGGATTCTGGGGATCATACGTTGCCA
TCGTCTCTCGCGTCATCTTGGCGCTGTTCTGGTTCGCAATTCAGAACGTC
AACGGCGGAAACGCCGTGCGTGCCATGATCGGGGCCATCTGGCCCAGCTT
CTTGAGGGTGAAGAACGAGATCCCTGAGGATCAGGGCATTACAACAAATG
GCATGGTCGGATACTTTATCTTCTGGCTGTTTCAACTGCCGTTTCTCTGC
ATCCACCCGAACAAAGTGCGGTGGCTGTTCGTGGTGAAGTCTGTGCTTGT
GCCGATCGCGTGGATTGCGATTCTGATCTGGGCATTTGTGGCAGAGGGAG
GAGGTAAAATGTTCGAGCAGAAAGCGACAGTCTCGGGGTCACAGTACAGC
TGGGTGTTCCTGGCGAGTATGACATCGGTTCTGGGGAACTATGCCACCCT
CAGTGTCAACCAGCGCAGCTTGTGCGACCGCTCCCTTACATTCGATCTAC
CATATTGCTTTTTCGCTCCCGCTCTCCTATCGGATGACTTCAACCTCATC
GACTCCATCTACCGCATCCCGGCGGCAACACATCTGATCATGAAGTTCAA
ACGGCCTCATCTTCGAGTGCCGCAGTCGCGCTCTGCTTTTGCGGATGGAA
GCGCTCGCTGGACAAATCTCGATCTCGATCCGGTTCCTCTCCATCGTCGA
CAATGGGGACCGCTCAGCTTCATCTATGGCTAATAAAAACGTGCCTGGTA
GCTCTGTTTGCATACCGCAGCGAGCCAATCTGACATTTCATGCACGCTTG
AACCACGGTTCGATCGCAGAAGCTGTCGGATTGAGCCAGTGCTTGACGTC
AGATTCGAGGCCTCATACTTTGCGCGATACTATAACCACTTATCTGGCGC
AAATGGCATCCCCTGGAGCACCCCGCTATCCGACTCTTATCGAAGCTGGG
CAGATATCCGACTTTTCTCGATACTCGCGTGTTACGGCAAAGTGGCAGCT
CCTATACGTCCCTATGCTGCCTATCGTGTTTACTTTTATCTCGTTCATCG
GCATTGCCGCCTCCTCAGCCGGCTACGCCAGATATGGTGGATCAATTCCA
TGGGATCCGATCGAACTAATCAGCCACTGGTCCAGCCGGGCATGTCGGTT
TTTCGCCGCATTTTCATTCGCTCTGGCTTCCCTCGGCGTCAACATATCCG
CCAATTCGATATCCGCAGCAAACGATCTGATGGCCCTGTTTCCGGGACAT
GTCAATCTGCGCCGAGGCCAGATCATCTGCGGCATTTTGTCTTGGGCACT
GGTGCCATGGAAGATTCTTGAGTCCGCGGACAGCTTTCTGAACTTCATGT
CTGCGTATGCCATCTTCCTGGGACCGATTGCAGCCATCATGCTGTGGGAC
TTTTGGCTGTTGAAGCACGGAAAGTACGACACCCTGGCTCTGTACCAGCC
GAACAACCCGGTGTATCGATACTCGAAATGGGGAGTGAACTGGCGCGCCA
TCGTGGCATTCATCGTCGGCGTGGTGCCGAGTCTGCCAGGACTGATCAAC
TCGGTCAACAGCAGTATTTCGGTGGGAGTGGGGCTCCACCCGTACCAGTT
CGGATGGCTGCTAGGGTTCGTAGGGACCAGCGTGGTATATGTAGGGTTAT
CGTGGTTGTTTCCTGCCCAGCATGCCATCATTGAGAGGGCTGTGATGGCA
GAAGAGATCTACGACGGACGGGAAGTTGACGCAGGATCCGAGGAACAGTT
GGACAACATGCAAGAGAAGGCCAAAGTATAACGTATTGGATTTCCGATGC
ATTTAATGCAGCTACATGGCAGTTTGCTAGCAGTATAATAGCAGTCGGAC
TTAGCTGGCGCGAATCCCTCATAATCGTCGCTATTTCGTTCTTCATCATG
TCTTTCGTCATTGCGGGCAACGGCGCTGTCGGCGCGATCTATCACATTCC
GTTCCCGGTGATCTCACGGGCTAGCTGGGGATTCTGGGGATCATACGTTG
CCATCGTCTCTCGCGTCATCTTGGCGCTGTTCTGGTTCGCAATTCAGAAC
GTCAACGGCGGAAACGCCGTGCGTGCCATGATCGGGGCCATCTGGCCCAG
CTTCTTGAGGGTGAAGAACGAGATCCCTGAGGATCAGGGCATTACAACAA
ATGGCATGGTCGGATACTTTATCTTCTGGCTGTTTCAACTGCCGTTTCTC
TGCATCCACCCGAACAAAGTGCGGTGGCTGTTCGTGGTGAAGTCTGTGCT
TGTGCCGATCGCGTGGATTGCGATTCTGATCTGGGCATTTGTGGCAGAGG
GAGGAGGTAAAATGTTCGAGCAGAAAGCGACAGTCTCGGGGTCACAGTAC
AGCTGGGTGTTCCTGGCGAGTATGACATCGGTTCTGGGGAACTATGCCAC
CCTCAGTGTCAACCAGCGCAGCTTGTGCGACCGCTCCCTTACATTCGATC
TACCATATTGCTTTTTCGCTCCCGCTCTCCTATCGGATGACTTCAACCTC
ATCGACTCCATCTACCGCATCCCGGCGGCAACACATCTGATCATGAAGTT
CAAACGGCCTCATCTTCGAGTGCCGCAGTCGCGCTCTGCTTTTGCGGATG
GAAGCGCTCGCTGGACAAATCTCGATCTCGATCCGGTTCCTCTCCATCGT
CGACAATGGGGACCGCTCAGCTTCATCTATGGCTAATAAAAACGTGCCTG
GTAGCTCTGTTTGCATACCGCAGCGAGCCAATCTGACATTTCATGCACGC
TTGAACCACGGTTCGATCGCAGAAGCTGTCGGATTGAGCCAGTGCTTGAC
GTCAGATTCGAGGCCTCATACTTTGCGCGATACTATAACCACTTATCTGG
CGCAAATGGCATCCCCTGGAGCACCCCGCTATCCGACTCTTATCGAAGCT
GGGCAGATATCCGACTTTTCTCGATACTCGCGTGTTACGGCAAAGTGGCA
GCTCCTATACGTCCCTATGCTGCCTATCGTGTTTACTTTTATCTCGTTCA
TCGGCATTGCCGCCTCCTCAGCCGGCTACGCCAGATATGGTGGATCAATT
CCATGGGATCCGATCGAACTAATCAGCCACTGGTCCAGCCGGGCATGTCG
GTTTTTCGCCGCATTTTCATTCGCTCTGGCTTCCCTCGGCGTCAACATAT
CCGCCAATTCGATATCCGCAGCAAACGATCTGATGGCCCTGTTTCCGGGA
CATGTCAATCTGCGCCGAGGCCAGATCATCTGCGGCATTTTGTCTTGGGC
ACTGGTGCCATGGAAGATTCTTGAGTCCGCGGACAGCTTTCTGAACTTCA
TGTCTGCGTATGCCATCTTCCTGGGACCGATTGCAGCCATCATGCTGTGG
GACTTTTGGCTGTTGAAGCACGGAAAGTACGACACCCTGGCTCTGTACCA
GCCGAACAACCCGGTGTATCGATACTCGAAATGGGGAGTGAACTGGCGCG
CCATCGTGGCATTCATCGTCGGCGTGGTGCCGAGTCTGCCAGGACTGATC
AACTCGGTCAACAGCAGTATTTCGGTGGGAGTGGGGCTCCACCCGTACCA
GTTCGGATGGCTGCTAGGGTTCGTAGGGACCAGCGTGGTATATGTAGGGT
TATCGTGGTTGTTTCCTGCCCAGCATGCCATCATTGAGAGGGCTGTGATG
GCAGAAGAGATCTACGACGGACGGGAAGTTGACGCAGGATCCGAGGAACA
GTTGGACAACATGCAAGAGAAGGCCAAAGTATAACGTATTGGATTTCCGA
TGCATTTAATGCAGCTACATGGCAGTTTGCTAGCAGTATAATAGCAGTCG
GACTTAGCTGGCGCGAATCCCTCATAATCGTCGCTATTTCGTTCTTCATC
ATGTCTTTCGTCATTGCGGGCAACGGCGCTGTCGGCGCGATCTATCACAT
TCCGTTCCCGGTGATCTCACGGGCTAGCTGGGGATTCTGGGGATCATACG
TTGCCATCGTCTCTCGCGTCATCTTGGCGCTGTTCTGGTTCGCAATTCAG
AACGTCAACGGCGGAAACGCCGTGCGTGCCATGATCGGGGCCATCTGGCC
CAGCTTCTTGAGGGTGAAGAACGAGATCCCTGAGGATCAGGGCATTACAA
CAAATGGCATGGTCGGATACTTTATCTTCTGGCTGTTTCAACTGCCGTTT
CTCTGCATCCACCCGAACAAAGTGCGGTGGCTGTTCGTGGTGAAGTCTGT
GCTTGTGCCGATCGCGTGGATTGCGATTCTGATCTGGGCATTTGTGGCAG
AGGGAGGAGGTAAAATGTTCGAGCAGAAAGCGACAGTCTCGGGGTCACAG
TACAGCTGGGTGTTCCTGGCGAGTATGACATCGGTTCTGGGGAACTATGC
CACCCTCAGTGTCAACCAGCGCAGCTTGTGCGACCGCTCCCTTACATTCG
ATCTACCATATTGCTTTTTCGCTCCCGCTCTCCTATCGGATGACTTCAAC
CTCATCGACTCCATCTACCGCATCCCGGCGGCAACACATCTGATCATGAA
GTTCAAACGGCCTCATCTTCGAGTGCCGCAGTCGCGCTCTGCTTTTGCGG
ATGGAAGCGCTCGCTGGACAAATCTCGATCTCGATCCGGTTCCTCTCCAT
CGTCGACAATGGGGACCGCTCAGCTTCATCTATGGCTAATAAAAACGTGC
CTGGTAGCTCTGTTTGCATACCGCAGCGAGCCAATCTGACATTTCATGCA
CGCTTGAACCACGGTTCGATCGCAGAAGCTGTCGGATTGAGCCAGTGCTT
GACGTCAGATTCGAGGCCTCATACTTTGCGCGATACTATAACCACTTATC
TGGCGCAAATGGCATCCCCTGGAGCACCCCGCTATCCGACTCTTATCGAA
GCTGGGCAGATA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001248 |
| DBxref | InterPro:IPR038271 |
| DBxref | PFAM:PF02133 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1306881..1309081 - |
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