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KJC3_003232-T1, KJC3_003232-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003232-T1
Unique NameKJC3_003232-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1358456..1359877-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003232-T1 ID=KJC3_003232-T1|Name=KJC3_003232-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1422bp|location=Sequence derived from alignment at ch3:1358456..1359877- (Aspergillus niger KJC3)
AGAGGGGGAAAGCGGGAGAGCAAGTGAGTTCCTGAGCGGCCGCCAAGTTG
CGAATCGATCAGCAGATCCGCCAAGTGCAACGTTTCCCTCCGCTGCTTGT
TGTTGCTGCTTGTTCTCCCTGTATTCCCCCACCCAGTCACTCACTCACCC
TCCCCTCTCCATACATTCCTGCCGGTCCAGGTGAGTAATAATAGTCCCCG
ACTTGTTCTATTTCCAATAATATACCGGTCGCGATCCATGACCGTTGACT
ATTTCCACCCCCTTGATCTGGCGCAGCAGGCTGACGTTGATTGACCGCCC
CCCAAGAAGGCACCTCCGCATCGGGAAGCTCAACTGACGTTGTCTCTTCC
AAACCCCCCACATATCGATACCTTTCGCTCTCCCCTCTACAGCTTCCGGC
CTATACAATTACTCCATCGTCACCATGTCGCAAAGTCATGCTTTGTCCGA
TGATCAGGTTTGTCGCTCGATTTCCGACTAGGGACCATGCATGTGCCCGC
TTCCGAGCTGAGCTGATACCATTATCTCCATCCAGGTTGCGGGCGAGCTC
CGCAAGATGACGGCCTTCATCCGGCAGGAAGCGCTGGAGAAGGCCCGTGA
AATCCAGCTCAAAGCTGACGAAGAGTTCGCCATCGAGAAGTCCAAGCTCG
TTCGCCAGGAGACTGCCGCCATCGACACTCAGTATGAGAAGAAGTTCAAG
CAAGCTTCCATGTCCCAGCAGATCACTCGCTCCACTCTCGCCAACCGCAC
CCGTCTTCGTGTTCTTTCTTCTCGCCAGGAACTCCTTGATGATTTGTTCC
AGAAGGCTCGTGATCAGATCTCCGGTATCGCAGCTAAGGATGCGTCGAAG
TATGAGGCTGTGCTGAAGGGCTTGGTTCTTGAGGGCTTGTACGCTCTCAA
TGAAGACAAGGTGTCTATTCGGGCGAGGAAGCAGGATACTGATGCTGTGA
AGAAGGCCATTGAAGAGGCCGAAAAGGAATTCAAGGAGACCGTCGGCAAG
GAGACGTCTGCGGAGCTGGACGAGGAGGAGCCGCTGCCCGAGGGATCGTA
AGTCCCCTTTCACCTTTCTTACCTCCAAATTTGTCCCCAATATGGTCGTC
TAACCTGGTGAATTATAGTGCTGGTGGTGTCATCATTATCGGTGGCCAGG
GCAAGATCGAGATCAACAACACGTTCGAAGAGCGGCTGCGCCTGCTCGAA
ATCGACGCCCTGCCCGCCGTCCGCGAGACGCTGTTCGGTAAGAACACCAA
CCGGAGGTTCTACGACTAGACCAATTCTACGTGTCACTTGCCAAGCGAAT
TTACAATACCTGAACCCGTTTCGTCGTTGCAGCCTGTATCTATGTACTCC
GGTTCTTTTTTCAGGAGAGCACCATAGCCTTGTATAAAGTCCTTCAATTC
ATTCTTATCAGAAACTCAACAG
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Coding sequence (CDS) from alignment at ch3:1358456..1359877-

>KJC3_003232-T1 ID=KJC3_003232-T1|Name=KJC3_003232-T1|organism=Aspergillus niger KJC3|type=CDS|length=2088bp|location=Sequence derived from alignment at ch3:1358456..1359877- (Aspergillus niger KJC3)
TGCTGGTGGTGTCATCATTATCGGTGGCCAGGGCAAGATCGAGATCAACA
ACACGTTCGAAGAGCGGCTGCGCCTGCTCGAAATCGACGCCCTGCCCGCC
GTCCGCGAGACGCTGTTCGGTAAGAACACCAACCGGAGGTTCTACGACTA
GGTTGCGGGCGAGCTCCGCAAGATGACGGCCTTCATCCGGCAGGAAGCGC
TGGAGAAGGCCCGTGAAATCCAGCTCAAAGCTGACGAAGAGTTCGCCATC
GAGAAGTCCAAGCTCGTTCGCCAGGAGACTGCCGCCATCGACACTCAGTA
TGAGAAGAAGTTCAAGCAAGCTTCCATGTCCCAGCAGATCACTCGCTCCA
CTCTCGCCAACCGCACCCGTCTTCGTGTTCTTTCTTCTCGCCAGGAACTC
CTTGATGATTTGTTCCAGAAGGCTCGTGATCAGATCTCCGGTATCGCAGC
TAAGGATGCGTCGAAGTATGAGGCTGTGCTGAAGGGCTTGGTTCTTGAGG
GCTTGTACGCTCTCAATGAAGACAAGGTGTCTATTCGGGCGAGGAAGCAG
GATACTGATGCTGTGAAGAAGGCCATTGAAGAGGCCGAAAAGGAATTCAA
GGAGACCGTCGGCAAGGAGACGTCTGCGGAGCTGGACGAGGAGGAGCCGC
TGCCCGAGGGATCATGTCGCAAAGTCATGCTTTGTCCGATGATCAGTGCT
GGTGGTGTCATCATTATCGGTGGCCAGGGCAAGATCGAGATCAACAACAC
GTTCGAAGAGCGGCTGCGCCTGCTCGAAATCGACGCCCTGCCCGCCGTCC
GCGAGACGCTGTTCGGTAAGAACACCAACCGGAGGTTCTACGACTAGGTT
GCGGGCGAGCTCCGCAAGATGACGGCCTTCATCCGGCAGGAAGCGCTGGA
GAAGGCCCGTGAAATCCAGCTCAAAGCTGACGAAGAGTTCGCCATCGAGA
AGTCCAAGCTCGTTCGCCAGGAGACTGCCGCCATCGACACTCAGTATGAG
AAGAAGTTCAAGCAAGCTTCCATGTCCCAGCAGATCACTCGCTCCACTCT
CGCCAACCGCACCCGTCTTCGTGTTCTTTCTTCTCGCCAGGAACTCCTTG
ATGATTTGTTCCAGAAGGCTCGTGATCAGATCTCCGGTATCGCAGCTAAG
GATGCGTCGAAGTATGAGGCTGTGCTGAAGGGCTTGGTTCTTGAGGGCTT
GTACGCTCTCAATGAAGACAAGGTGTCTATTCGGGCGAGGAAGCAGGATA
CTGATGCTGTGAAGAAGGCCATTGAAGAGGCCGAAAAGGAATTCAAGGAG
ACCGTCGGCAAGGAGACGTCTGCGGAGCTGGACGAGGAGGAGCCGCTGCC
CGAGGGATCATGTCGCAAAGTCATGCTTTGTCCGATGATCAGTGCTGGTG
GTGTCATCATTATCGGTGGCCAGGGCAAGATCGAGATCAACAACACGTTC
GAAGAGCGGCTGCGCCTGCTCGAAATCGACGCCCTGCCCGCCGTCCGCGA
GACGCTGTTCGGTAAGAACACCAACCGGAGGTTCTACGACTAGGTTGCGG
GCGAGCTCCGCAAGATGACGGCCTTCATCCGGCAGGAAGCGCTGGAGAAG
GCCCGTGAAATCCAGCTCAAAGCTGACGAAGAGTTCGCCATCGAGAAGTC
CAAGCTCGTTCGCCAGGAGACTGCCGCCATCGACACTCAGTATGAGAAGA
AGTTCAAGCAAGCTTCCATGTCCCAGCAGATCACTCGCTCCACTCTCGCC
AACCGCACCCGTCTTCGTGTTCTTTCTTCTCGCCAGGAACTCCTTGATGA
TTTGTTCCAGAAGGCTCGTGATCAGATCTCCGGTATCGCAGCTAAGGATG
CGTCGAAGTATGAGGCTGTGCTGAAGGGCTTGGTTCTTGAGGGCTTGTAC
GCTCTCAATGAAGACAAGGTGTCTATTCGGGCGAGGAAGCAGGATACTGA
TGCTGTGAAGAAGGCCATTGAAGAGGCCGAAAAGGAATTCAAGGAGACCG
TCGGCAAGGAGACGTCTGCGGAGCTGGACGAGGAGGAGCCGCTGCCCGAG
GGATCATGTCGCAAAGTCATGCTTTGTCCGATGATCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033178proton-transporting two-sector ATPase complex, catalytic domain
Vocabulary: Biological Process
TermDefinition
GO:1902600proton transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0046961proton-transporting ATPase activity, rotational mechanism
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VMA4KJC3_003232Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003232-T1KJC3_003232-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003232-T1.cdsKJC3_003232-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003232-T1.utr3p1KJC3_003232-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003232-T1.exon4KJC3_003232-T1.exon4Aspergillus niger KJC3exon
KJC3_003232-T1.exon3KJC3_003232-T1.exon3Aspergillus niger KJC3exon
KJC3_003232-T1.exon2KJC3_003232-T1.exon2Aspergillus niger KJC3exon
KJC3_003232-T1.exon1KJC3_003232-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003232-T1.utr5p2KJC3_003232-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_003232-T1.utr5p1KJC3_003232-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264OML
DBxrefInterPro:IPR038495
DBxrefInterPro:IPR002842
DBxrefPFAM:PF01991
ProductV-ATPase V1 sector subunit E
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1358456..1359877 -
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