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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1359915..1362375+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003233-T1 ID=KJC3_003233-T1|Name=KJC3_003233-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2461bp|location=Sequence derived from alignment at ch3:1359915..1362375+ (Aspergillus niger KJC3)
GTCTGGTTTTTCTCTCTCATTTGGTTACTACGTCGCCCTGGACAATGGAG
TCGGTCCTACTAGTCCTGTCGTATCCTGTCTAATGCGTGTCTGGTCTTTG
TCCCCCGGCTCAGCGACCAATGCACGAGGATATCCGAGATGGGTAATCTT
GGTGACTTATCGCCCCAGGGGAGTGTCGCGGTTTGTTCTTCCCTCTCCAG
TGTTCTCGGTTTATTCATATCGAGCTGCTGTGCTAATTAGATGACGGTTC
TAGGTTGGGGTTGTTGTCGGGTTGATCTCGACCAGTCTCCAGGCCATCGG
GCTGACCCTACAACGCAAGTCGCATATCCTCGAGGACGAGAAACACCCGT
ACGATATACGTCGACCACCCTACAAACGTCGGAGATGGCAGGTCAGATTA
TGCTCCTCCCTATATGATGCATCCGTTACGAACCGGCCTTGCTGATTCTA
CGTAGTTGGGGATGCTGATGTTCGTCATTGCAAACATCGTCGGCAGCACC
ATCCAGATAACTACCCTCCCGCTTCCGGTGCTTTCAACCCTTCAAGCAGT
CAGTGACTTCTCTGAATCATATGGTAGATTTCCCGGGCGCCGCTAACATA
TTCTGTACTAGTCCGGGCTTGTTTTCAATACCATATTTGCTACTTTGATC
CTGGGTGAAGCTTTCACCAGATACTCTCTCATCGGCACAGTCTTGGTCTG
CATCGGCGCGCTCCTTATAGCAGTTTTTGGCGCCGTGGGGGAGCCAGCGC
ATACTCTCGATCAGCTTTTGGAGCTACTGCAGCGTCGAAACTTTATACTT
TGGATGGCAGGGACGGCCGTATTGGTGCTGGTCATCTATCTCGGCTCCCG
CCTGCTGAAATTCCTGGCTTCTCCATCTCGTTCTAAATACCCCGGCACAC
GCGGTTCATATAGGCCGCACTTGCAAATCTCCCACGGACGTGTTCGACTG
ATCCGCGGTCTATGCTATGGCATGATCAGCGGTATCCTATCGGCGCATTC
TCTTCTGCTCGCTAAATCAGCCGTGGAGCTCCTCGTTCGGACAGTCGTGG
ATCGCGTCAATCAATTCGATCGCTGGCAATCTTGGGTCATTCTTCTCGCC
ATGATCGGTCTTGCCCTCTCTCAACTATTCTATCTACATCGGGGCCTGAA
GCTGTGCAGCACCAGTGTCCTGTACCCATTCGTCTTCTGCATCTATAATA
TTATCGCCATCATAGATGGATTAATATACTTCCGGCAAATGTCCCAGCTG
GCAGGCTTCCATGCTGGGCTGATATCGCTTGGAACAATTGTCTTACTTGG
AGGTGTCCTCTGCTTGTCGTGGCGCTTAGAGGTCATAGACAGCCATGCGG
CTGTGACTGTTGTCGGACCGTCTCAGACTGGCCTTGGTCCTGGAATGGCT
GTCGTCGAGGAGCATGAAACCTCCCCCCTTAGTCTGGGAAGGGACAGCCA
CGAGGATCTGGAGCGTGAGCCCCTCTTACGCAGTGCTCAAATTCCTCGGC
GAAGTATACATAAGAGAGCACCCAGTCTGCCTCTACCTCAATCCTCATTG
AGTCCGCAGGACTCCACGGCAGATCTCGATCCAGCTTCCATCTGGGCAGA
GTTGGATGACTCTGACTTTGACTATGCCGCAGCTATGATGCGTTCCTCCA
GGCGCAGTCGCACATTTGGAGATCCACCTTCGGCCCAGTCAAGAAGCAGA
ATGAGAAACAGTTTCCAGCGTGGACCTCGCCGCTCCAGCACCATTTCAGT
CAACCAGAATACCTGGAACCCGCGCAGAACATCACAAGCCGTACATCAGG
GGCGTCGCAAGCAACGGCGAACATCAGCACCTGCTCCAGAGAACCGCAGT
CTCCTTTCGAAGCCCCAACCCCACGCAACCGGCTACGGCACCCAGGACGA
CCGCTCAGACAACCTAGTATCGGGGCATCGTCGCCGCGAATCCCTCACCG
ACGCAGATTCATCAGCCGGGTACTCGAATCTCCTCGCAGGTCCGAGGAGC
ACTCTCCGCGGAGCCTGGCGAAGCGGTCTTCAATACCTCACTCAATGGAC
CGGTAGCAATCGAGAAAGACGTCAGAGCTCATCCAGTCCGGGCCCCGACC
TTGAAGCCAGTCCCAACCAACGCACAGAATGAAAGTAGACATCCATTCCG
TCGCTTCCTGCACCGCCATCTTATCCACATTCCAATCTTATCCCAGACCT
CTTGGTTATATCCACTAGACCCACCCCATAAATACACATCAATGATAACC
CCTTCCTGTTTCCTTTCAACCAATGTACAATAACTTCATACCATCTTTTA
TCTATCTATAAGGATACACCAACAAACCTATTCTCTCATAGTTTACACCA
CACCAGAGCATCAATACTTCCTATCTACTTCTTGTCTTTTTGATTAGAAA
CTGAACGAACCAAATAAGAGATACAATACATACTAATACAAAATGAAAAG
TTTATCTTGCT back to topCoding sequence (CDS) from alignment at ch3:1359915..1362375+ >KJC3_003233-T1 ID=KJC3_003233-T1|Name=KJC3_003233-T1|organism=Aspergillus niger KJC3|type=CDS|length=7176bp|location=Sequence derived from alignment at ch3:1359915..1362375+ (Aspergillus niger KJC3)
ATGGGTAATCTTGGTGACTTATCGCCCCAGGGGAGTGTCGCGGTTGGGGT
TGTTGTCGGGTTGATCTCGACCAGTCTCCAGGCCATCGGGCTGACCCTAC
AACGCAAGTCGCATATCCTCGAGGACGAGAAACACCCGTACGATATACGT
CGACCACCCTACAAACGTCGGAGATGGCAGTTGGGGATGCTGATGTTCGT
CATTGCAAACATCGTCGGCAGCACCATCCAGATAACTACCCTCCCGCTTC
CGGTGCTTTCAACCCTTCAAGCATCCGGGCTTGTTTTCAATACCATATTT
GCTACTTTGATCCTGGGTGAAGCTTTCACCAGATACTCTCTCATCGGCAC
AGTCTTGGTCTGCATCGGCGCGCTCCTTATAGCAGTTTTTGGCGCCGTGG
GGGAGCCAGCGCATACTCTCGATCAGCTTTTGGAGCTACTGCAGCGTCGA
AACTTTATACTTTGGATGGCAGGGACGGCCGTATTGGTGCTGGTCATCTA
TCTCGGCTCCCGCCTGCTGAAATTCCTGGCTTCTCCATCTCGTTCTAAAT
ACCCCGGCACACGCGGTTCATATAGGCCGCACTTGCAAATCTCCCACGGA
CGTGTTCGACTGATCCGCGGTCTATGCTATGGCATGATCAGCGGTATCCT
ATCGGCGCATTCTCTTCTGCTCGCTAAATCAGCCGTGGAGCTCCTCGTTC
GGACAGTCGTGGATCGCGTCAATCAATTCGATCGCTGGCAATCTTGGGTC
ATTCTTCTCGCCATGATCGGTCTTGCCCTCTCTCAACTATTCTATCTACA
TCGGGGCCTGAAGCTGTGCAGCACCAGTGTCCTGTACCCATTCGTCTTCT
GCATCTATAATATTATCGCCATCATAGATGGATTAATATACTTCCGGCAA
ATGTCCCAGCTGGCAGGCTTCCATGCTGGGCTGATATCGCTTGGAACAAT
TGTCTTACTTGGAGGTGTCCTCTGCTTGTCGTGGCGCTTAGAGGTCATAG
ACAGCCATGCGGCTGTGACTGTTGTCGGACCGTCTCAGACTGGCCTTGGT
CCTGGAATGGCTGTCGTCGAGGAGCATGAAACCTCCCCCCTTAGTCTGGG
AAGGGACAGCCACGAGGATCTGGAGCGTGAGCCCCTCTTACGCAGTGCTC
AAATTCCTCGGCGAAGTATACATAAGAGAGCACCCAGTCTGCCTCTACCT
CAATCCTCATTGAGTCCGCAGGACTCCACGGCAGATCTCGATCCAGCTTC
CATCTGGGCAGAGTTGGATGACTCTGACTTTGACTATGCCGCAGCTATGA
TGCGTTCCTCCAGGCGCAGTCGCACATTTGGAGATCCACCTTCGGCCCAG
TCAAGAAGCAGAATGAGAAACAGTTTCCAGCGTGGACCTCGCCGCTCCAG
CACCATTTCAGTCAACCAGAATACCTGGAACCCGCGCAGAACATCACAAG
CCGTACATCAGGGGCGTCGCAAGCAACGGCGAACATCAGCACCTGCTCCA
GAGAACCGCAGTCTCCTTTCGAAGCCCCAACCCCACGCAACCGGCTACGG
CACCCAGGACGACCGCTCAGACAACCTAGTATCGGGGCATCGTCGCCGCG
AATCCCTCACCGACGCAGATTCATCAGCCGGGTACTCGAATCTCCTCGCA
GGTCCGAGGAGCACTCTCCGCGGAGCCTGGCGAAGCGGTCTTCAATACCT
CACTCAATGGACCGGTAGCAATCGAGAAAGACGTCAGAGCTCATCCAGTC
CGGGCCCCGACCTTGAAGCCAGTCCCAACCAACGCACAGAATGAATGGGT
AATCTTGGTGACTTATCGCCCCAGGGGAGTGTCGCGGTTGGGGTTGTTGT
CGGGTTGATCTCGACCAGTCTCCAGGCCATCGGGCTGACCCTACAACGCA
AGTCGCATATCCTCGAGGACGAGAAACACCCGTACGATATACGTCGACCA
CCCTACAAACGTCGGAGATGGCAGTTGGGGATGCTGATGTTCGTCATTGC
AAACATCGTCGGCAGCACCATCCAGATAACTACCCTCCCGCTTCCGGTGC
TTTCAACCCTTCAAGCATCCGGGCTTGTTTTCAATACCATATTTGCTACT
TTGATCCTGGGTGAAGCTTTCACCAGATACTCTCTCATCGGCACAGTCTT
GGTCTGCATCGGCGCGCTCCTTATAGCAGTTTTTGGCGCCGTGGGGGAGC
CAGCGCATACTCTCGATCAGCTTTTGGAGCTACTGCAGCGTCGAAACTTT
ATACTTTGGATGGCAGGGACGGCCGTATTGGTGCTGGTCATCTATCTCGG
CTCCCGCCTGCTGAAATTCCTGGCTTCTCCATCTCGTTCTAAATACCCCG
GCACACGCGGTTCATATAGGCCGCACTTGCAAATCTCCCACGGACGTGTT
CGACTGATCCGCGGTCTATGCTATGGCATGATCAGCGGTATCCTATCGGC
GCATTCTCTTCTGCTCGCTAAATCAGCCGTGGAGCTCCTCGTTCGGACAG
TCGTGGATCGCGTCAATCAATTCGATCGCTGGCAATCTTGGGTCATTCTT
CTCGCCATGATCGGTCTTGCCCTCTCTCAACTATTCTATCTACATCGGGG
CCTGAAGCTGTGCAGCACCAGTGTCCTGTACCCATTCGTCTTCTGCATCT
ATAATATTATCGCCATCATAGATGGATTAATATACTTCCGGCAAATGTCC
CAGCTGGCAGGCTTCCATGCTGGGCTGATATCGCTTGGAACAATTGTCTT
ACTTGGAGGTGTCCTCTGCTTGTCGTGGCGCTTAGAGGTCATAGACAGCC
ATGCGGCTGTGACTGTTGTCGGACCGTCTCAGACTGGCCTTGGTCCTGGA
ATGGCTGTCGTCGAGGAGCATGAAACCTCCCCCCTTAGTCTGGGAAGGGA
CAGCCACGAGGATCTGGAGCGTGAGCCCCTCTTACGCAGTGCTCAAATTC
CTCGGCGAAGTATACATAAGAGAGCACCCAGTCTGCCTCTACCTCAATCC
TCATTGAGTCCGCAGGACTCCACGGCAGATCTCGATCCAGCTTCCATCTG
GGCAGAGTTGGATGACTCTGACTTTGACTATGCCGCAGCTATGATGCGTT
CCTCCAGGCGCAGTCGCACATTTGGAGATCCACCTTCGGCCCAGTCAAGA
AGCAGAATGAGAAACAGTTTCCAGCGTGGACCTCGCCGCTCCAGCACCAT
TTCAGTCAACCAGAATACCTGGAACCCGCGCAGAACATCACAAGCCGTAC
ATCAGGGGCGTCGCAAGCAACGGCGAACATCAGCACCTGCTCCAGAGAAC
CGCAGTCTCCTTTCGAAGCCCCAACCCCACGCAACCGGCTACGGCACCCA
GGACGACCGCTCAGACAACCTAGTATCGGGGCATCGTCGCCGCGAATCCC
TCACCGACGCAGATTCATCAGCCGGGTACTCGAATCTCCTCGCAGGTCCG
AGGAGCACTCTCCGCGGAGCCTGGCGAAGCGGTCTTCAATACCTCACTCA
ATGGACCGGTAGCAATCGAGAAAGACGTCAGAGCTCATCCAGTCCGGGCC
CCGACCTTGAAGCCAGTCCCAACCAACGCACAGAATGAATGGGTAATCTT
GGTGACTTATCGCCCCAGGGGAGTGTCGCGGTTGGGGTTGTTGTCGGGTT
GATCTCGACCAGTCTCCAGGCCATCGGGCTGACCCTACAACGCAAGTCGC
ATATCCTCGAGGACGAGAAACACCCGTACGATATACGTCGACCACCCTAC
AAACGTCGGAGATGGCAGTTGGGGATGCTGATGTTCGTCATTGCAAACAT
CGTCGGCAGCACCATCCAGATAACTACCCTCCCGCTTCCGGTGCTTTCAA
CCCTTCAAGCATCCGGGCTTGTTTTCAATACCATATTTGCTACTTTGATC
CTGGGTGAAGCTTTCACCAGATACTCTCTCATCGGCACAGTCTTGGTCTG
CATCGGCGCGCTCCTTATAGCAGTTTTTGGCGCCGTGGGGGAGCCAGCGC
ATACTCTCGATCAGCTTTTGGAGCTACTGCAGCGTCGAAACTTTATACTT
TGGATGGCAGGGACGGCCGTATTGGTGCTGGTCATCTATCTCGGCTCCCG
CCTGCTGAAATTCCTGGCTTCTCCATCTCGTTCTAAATACCCCGGCACAC
GCGGTTCATATAGGCCGCACTTGCAAATCTCCCACGGACGTGTTCGACTG
ATCCGCGGTCTATGCTATGGCATGATCAGCGGTATCCTATCGGCGCATTC
TCTTCTGCTCGCTAAATCAGCCGTGGAGCTCCTCGTTCGGACAGTCGTGG
ATCGCGTCAATCAATTCGATCGCTGGCAATCTTGGGTCATTCTTCTCGCC
ATGATCGGTCTTGCCCTCTCTCAACTATTCTATCTACATCGGGGCCTGAA
GCTGTGCAGCACCAGTGTCCTGTACCCATTCGTCTTCTGCATCTATAATA
TTATCGCCATCATAGATGGATTAATATACTTCCGGCAAATGTCCCAGCTG
GCAGGCTTCCATGCTGGGCTGATATCGCTTGGAACAATTGTCTTACTTGG
AGGTGTCCTCTGCTTGTCGTGGCGCTTAGAGGTCATAGACAGCCATGCGG
CTGTGACTGTTGTCGGACCGTCTCAGACTGGCCTTGGTCCTGGAATGGCT
GTCGTCGAGGAGCATGAAACCTCCCCCCTTAGTCTGGGAAGGGACAGCCA
CGAGGATCTGGAGCGTGAGCCCCTCTTACGCAGTGCTCAAATTCCTCGGC
GAAGTATACATAAGAGAGCACCCAGTCTGCCTCTACCTCAATCCTCATTG
AGTCCGCAGGACTCCACGGCAGATCTCGATCCAGCTTCCATCTGGGCAGA
GTTGGATGACTCTGACTTTGACTATGCCGCAGCTATGATGCGTTCCTCCA
GGCGCAGTCGCACATTTGGAGATCCACCTTCGGCCCAGTCAAGAAGCAGA
ATGAGAAACAGTTTCCAGCGTGGACCTCGCCGCTCCAGCACCATTTCAGT
CAACCAGAATACCTGGAACCCGCGCAGAACATCACAAGCCGTACATCAGG
GGCGTCGCAAGCAACGGCGAACATCAGCACCTGCTCCAGAGAACCGCAGT
CTCCTTTCGAAGCCCCAACCCCACGCAACCGGCTACGGCACCCAGGACGA
CCGCTCAGACAACCTAGTATCGGGGCATCGTCGCCGCGAATCCCTCACCG
ACGCAGATTCATCAGCCGGGTACTCGAATCTCCTCGCAGGTCCGAGGAGC
ACTCTCCGCGGAGCCTGGCGAAGCGGTCTTCAATACCTCACTCAATGGAC
CGGTAGCAATCGAGAAAGACGTCAGAGCTCATCCAGTCCGGGCCCCGACC
TTGAAGCCAGTCCCAACCAACGCACAGAATGAATGGGTAATCTTGGTGAC
TTATCGCCCCAGGGGAGTGTCGCGGTTGGGGTTGTTGTCGGGTTGATCTC
GACCAGTCTCCAGGCCATCGGGCTGACCCTACAACGCAAGTCGCATATCC
TCGAGGACGAGAAACACCCGTACGATATACGTCGACCACCCTACAAACGT
CGGAGATGGCAGTTGGGGATGCTGATGTTCGTCATTGCAAACATCGTCGG
CAGCACCATCCAGATAACTACCCTCCCGCTTCCGGTGCTTTCAACCCTTC
AAGCATCCGGGCTTGTTTTCAATACCATATTTGCTACTTTGATCCTGGGT
GAAGCTTTCACCAGATACTCTCTCATCGGCACAGTCTTGGTCTGCATCGG
CGCGCTCCTTATAGCAGTTTTTGGCGCCGTGGGGGAGCCAGCGCATACTC
TCGATCAGCTTTTGGAGCTACTGCAGCGTCGAAACTTTATACTTTGGATG
GCAGGGACGGCCGTATTGGTGCTGGTCATCTATCTCGGCTCCCGCCTGCT
GAAATTCCTGGCTTCTCCATCTCGTTCTAAATACCCCGGCACACGCGGTT
CATATAGGCCGCACTTGCAAATCTCCCACGGACGTGTTCGACTGATCCGC
GGTCTATGCTATGGCATGATCAGCGGTATCCTATCGGCGCATTCTCTTCT
GCTCGCTAAATCAGCCGTGGAGCTCCTCGTTCGGACAGTCGTGGATCGCG
TCAATCAATTCGATCGCTGGCAATCTTGGGTCATTCTTCTCGCCATGATC
GGTCTTGCCCTCTCTCAACTATTCTATCTACATCGGGGCCTGAAGCTGTG
CAGCACCAGTGTCCTGTACCCATTCGTCTTCTGCATCTATAATATTATCG
CCATCATAGATGGATTAATATACTTCCGGCAAATGTCCCAGCTGGCAGGC
TTCCATGCTGGGCTGATATCGCTTGGAACAATTGTCTTACTTGGAGGTGT
CCTCTGCTTGTCGTGGCGCTTAGAGGTCATAGACAGCCATGCGGCTGTGA
CTGTTGTCGGACCGTCTCAGACTGGCCTTGGTCCTGGAATGGCTGTCGTC
GAGGAGCATGAAACCTCCCCCCTTAGTCTGGGAAGGGACAGCCACGAGGA
TCTGGAGCGTGAGCCCCTCTTACGCAGTGCTCAAATTCCTCGGCGAAGTA
TACATAAGAGAGCACCCAGTCTGCCTCTACCTCAATCCTCATTGAGTCCG
CAGGACTCCACGGCAGATCTCGATCCAGCTTCCATCTGGGCAGAGTTGGA
TGACTCTGACTTTGACTATGCCGCAGCTATGATGCGTTCCTCCAGGCGCA
GTCGCACATTTGGAGATCCACCTTCGGCCCAGTCAAGAAGCAGAATGAGA
AACAGTTTCCAGCGTGGACCTCGCCGCTCCAGCACCATTTCAGTCAACCA
GAATACCTGGAACCCGCGCAGAACATCACAAGCCGTACATCAGGGGCGTC
GCAAGCAACGGCGAACATCAGCACCTGCTCCAGAGAACCGCAGTCTCCTT
TCGAAGCCCCAACCCCACGCAACCGGCTACGGCACCCAGGACGACCGCTC
AGACAACCTAGTATCGGGGCATCGTCGCCGCGAATCCCTCACCGACGCAG
ATTCATCAGCCGGGTACTCGAATCTCCTCGCAGGTCCGAGGAGCACTCTC
CGCGGAGCCTGGCGAAGCGGTCTTCAATACCTCACTCAATGGACCGGTAG
CAATCGAGAAAGACGTCAGAGCTCATCCAGTCCGGGCCCCGACCTTGAAG
CCAGTCCCAACCAACGCACAGAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
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| GO:0015693 | magnesium ion transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015095 | magnesium ion transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003233-T1.utr5p1 | KJC3_003233-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003233-T1.utr3p1 | KJC3_003233-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008521 |
| DBxref | PFAM:PF05653 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1359915..1362375 + |
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