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KJC3_003234-T1, KJC3_003234-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003234-T1
Unique NameKJC3_003234-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1363846..1364769-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003234-T1 ID=KJC3_003234-T1|Name=KJC3_003234-T1|organism=Aspergillus niger KJC3|type=mRNA|length=924bp|location=Sequence derived from alignment at ch3:1363846..1364769- (Aspergillus niger KJC3)
ATGGCCGACATCACTGCCGTCGGTGAGGAGAACCCTTCTCCTACTCAGGA
CGACCTGCAGCAGGCCGCCGGTAACGGCGCCGCTGACAACCGCGGCACCA
AGCGCTCTCGCATGAGCGCCGACGACGACGACGATGATGATGACAAGCCC
GGTCGCGAGCGCAGAAAGATTGAGATCAAATTCATTCAGGATAAGTCGCG
TCGCCACATCACCTTCTCCAAGCGGAAGGCGGGTATCATGAAGAAGGTGC
GTGCTGTCGCGTCTCTGCAGCCTCATCTCTCCCCTTCGTTATCGCCGTCA
ATTCTGTCGCCAACTCTAGTCTTTTCATGATGCGTCTTTTCTCGTCGTTG
TCAAGCTTGTTTTGCACGTTGTCTGCCTGGAACTATTGCCGTTGGATCGG
TGCTGACGCCTCAATGCGGTCGCAAAACAGGCCTACGAACTCTCCGTTCT
CACAGGTACCCAAGTACTCCTCCTGGTGGTGTCCGAGACCGGTCTCGTCT
ATACTTTCACCACCCCGAAGCTTCAACCGCTGGTGACCAAGGCTGAGGGC
AAGAACCTCATTCAGGTGAGTGCTGTGCCACTGCTTCCTCTCGTCTACGC
GAGTCGAACTCAACGCGACTGACTCCCTCCGTTTCCCATGTACAGGCCTG
CCTGAATGCACCTGATCCCACTACCAATGAGAATGGCGTTGATGCGCCCG
AGGTGCCGGCTGAGACGCCAGAGGATGTCAGCCACAGCAATGTCAACCCT
CAACAGTCGAATATCCCCCGTCCCGCCGGTATGCACCCCGGCTACATGAC
GAACGAACAACAGCAGCAGATGGCCTACTACCAGGGCCTTCAGCAGCAAC
AGCAGGCAGGAGGACAGTATCCTGGCATGCCTGTGGGTAACCGGATGCCA
CCTCAGCACCAGCCCACGGCGTAA
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Coding sequence (CDS) from alignment at ch3:1363846..1364769-

>KJC3_003234-T1 ID=KJC3_003234-T1|Name=KJC3_003234-T1|organism=Aspergillus niger KJC3|type=CDS|length=1980bp|location=Sequence derived from alignment at ch3:1363846..1364769- (Aspergillus niger KJC3)
GCCTGCCTGAATGCACCTGATCCCACTACCAATGAGAATGGCGTTGATGC
GCCCGAGGTGCCGGCTGAGACGCCAGAGGATGTCAGCCACAGCAATGTCA
ACCCTCAACAGTCGAATATCCCCCGTCCCGCCGGTATGCACCCCGGCTAC
ATGACGAACGAACAACAGCAGCAGATGGCCTACTACCAGGGCCTTCAGCA
GCAACAGCAGGCAGGAGGACAGTATCCTGGCATGCCTGTGGGTAACCGGA
TGCCACCTCAGCACCAGCCCACGGCGTAAGCCTACGAACTCTCCGTTCTC
ACAGGTACCCAAGTACTCCTCCTGGTGGTGTCCGAGACCGGTCTCGTCTA
TACTTTCACCACCCCGAAGCTTCAACCGCTGGTGACCAAGGCTGAGGGCA
AGAACCTCATTCAGATGGCCGACATCACTGCCGTCGGTGAGGAGAACCCT
TCTCCTACTCAGGACGACCTGCAGCAGGCCGCCGGTAACGGCGCCGCTGA
CAACCGCGGCACCAAGCGCTCTCGCATGAGCGCCGACGACGACGACGATG
ATGATGACAAGCCCGGTCGCGAGCGCAGAAAGATTGAGATCAAATTCATT
CAGGATAAGTCGCGTCGCCACATCACCTTCTCCAAGCGGAAGGCGGGTAT
CATGAAGAAGGCCTGCCTGAATGCACCTGATCCCACTACCAATGAGAATG
GCGTTGATGCGCCCGAGGTGCCGGCTGAGACGCCAGAGGATGTCAGCCAC
AGCAATGTCAACCCTCAACAGTCGAATATCCCCCGTCCCGCCGGTATGCA
CCCCGGCTACATGACGAACGAACAACAGCAGCAGATGGCCTACTACCAGG
GCCTTCAGCAGCAACAGCAGGCAGGAGGACAGTATCCTGGCATGCCTGTG
GGTAACCGGATGCCACCTCAGCACCAGCCCACGGCGTAAGCCTACGAACT
CTCCGTTCTCACAGGTACCCAAGTACTCCTCCTGGTGGTGTCCGAGACCG
GTCTCGTCTATACTTTCACCACCCCGAAGCTTCAACCGCTGGTGACCAAG
GCTGAGGGCAAGAACCTCATTCAGATGGCCGACATCACTGCCGTCGGTGA
GGAGAACCCTTCTCCTACTCAGGACGACCTGCAGCAGGCCGCCGGTAACG
GCGCCGCTGACAACCGCGGCACCAAGCGCTCTCGCATGAGCGCCGACGAC
GACGACGATGATGATGACAAGCCCGGTCGCGAGCGCAGAAAGATTGAGAT
CAAATTCATTCAGGATAAGTCGCGTCGCCACATCACCTTCTCCAAGCGGA
AGGCGGGTATCATGAAGAAGGCCTGCCTGAATGCACCTGATCCCACTACC
AATGAGAATGGCGTTGATGCGCCCGAGGTGCCGGCTGAGACGCCAGAGGA
TGTCAGCCACAGCAATGTCAACCCTCAACAGTCGAATATCCCCCGTCCCG
CCGGTATGCACCCCGGCTACATGACGAACGAACAACAGCAGCAGATGGCC
TACTACCAGGGCCTTCAGCAGCAACAGCAGGCAGGAGGACAGTATCCTGG
CATGCCTGTGGGTAACCGGATGCCACCTCAGCACCAGCCCACGGCGTAAG
CCTACGAACTCTCCGTTCTCACAGGTACCCAAGTACTCCTCCTGGTGGTG
TCCGAGACCGGTCTCGTCTATACTTTCACCACCCCGAAGCTTCAACCGCT
GGTGACCAAGGCTGAGGGCAAGAACCTCATTCAGATGGCCGACATCACTG
CCGTCGGTGAGGAGAACCCTTCTCCTACTCAGGACGACCTGCAGCAGGCC
GCCGGTAACGGCGCCGCTGACAACCGCGGCACCAAGCGCTCTCGCATGAG
CGCCGACGACGACGACGATGATGATGACAAGCCCGGTCGCGAGCGCAGAA
AGATTGAGATCAAATTCATTCAGGATAAGTCGCGTCGCCACATCACCTTC
TCCAAGCGGAAGGCGGGTATCATGAAGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0045944positive regulation of transcription by RNA polymerase II
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000987cis-regulatory region sequence-specific DNA binding
GO:0003677DNA binding
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003234KJC3_003234Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003234-T1KJC3_003234-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003234-T1.cdsKJC3_003234-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003234-T1.exon3KJC3_003234-T1.exon3Aspergillus niger KJC3exon
KJC3_003234-T1.exon2KJC3_003234-T1.exon2Aspergillus niger KJC3exon
KJC3_003234-T1.exon1KJC3_003234-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR033897
DBxrefInterPro:IPR036879
DBxrefInterPro:IPR002100
DBxrefPFAM:PF00319
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1363846..1364769 -
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